Eocc000542.1
Basic Information
- Insect
- Eurois occulta
- Gene Symbol
- -
- Assembly
- GCA_950022335.1
- Location
- OX465477.1:8289713-8290789[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.3e-09 0.0001 22.9 3.7 109 171 125 187 76 228 0.90
Sequence Information
- Coding Sequence
- ATGGCAGATAATCCTGTTGCGGCGCTGAGTTCTGGGATGTTATGGGGATGTTGTGACCAAACAGCTGACAACGAAAAATACGCTAAATGCGTAAAATGTCATAAGGCATATCATTATACATGCCTGTCTTTCGCTGACGACTACAACGTACCTGCTAAGTGGCATTGTCCTGAATGTCTAAACTCAGGCCCGAAACAGAGCAAATCAGATAACACGCCTTTGCGTAACATCTCGACCACTAGAGGCAATAAGAGGCAAGCCATTGGATCTCCACCTCAGGCGCCTGTTGAAATTGCGTTAGCACCCGACGATATTCGTCTACTTATTCAGGAAGCAGTCAAAAAGGAACAGGCAGAGATGTTAAGTAAGTTCATAGAAAATATGAAACTTACCCTAAATCAACAACTGCAACCAATAAAAGACCAAATGGAGAATATGGAAAAATCCATGGCTTTTATGAATCATCAGTACGAAGATCTTTTAAAGGAATATACAGCGTCCAAGGAGAATATGAAGGAGTTGCAAAGGGAAAACTCTGAAATGAAAGTGTGCATTAACGATTTGACTTCACGCATAAGTCAACTGGAACAGCAAACCCGTGCAGACAATGTGGAAATTCAGTGTCTGCCGGAAAAAAAGCAGGAAAATTTGATAGATATTGTGTCACACTTATCTAAAGTAGTAGGAAGCGGTATTAAAGACCACGATATTAAGCATTGCACAAGAGTCGCAAAACAAAATGCCAGCAATTCCCGCCCGCGTGCCGTGGTTGTACAACTTGCTTCCCCCCGTAGTCGTGACCAATTTCTCGCAGCTaccataaaatttaataaatcgaACCCAGATAATAAACTGAATACAACACACTTGGGATACTCTGGACCTAAATCTCCGATCTACATTACAGAACATCTGTCCACTACCAACAAGGCTCTCCATGCAGCCGCTAGAATCAAAGCCAAGGAAATCGGATATCAGTTTGTCTGGGTACGAGGTGGTCGAATATTCATGCGGAAGGCACAGGAATCGGAACACATTCTGATTAGGAATAAGGATAGTTTGAATAAGCTGGGTTAA
- Protein Sequence
- MADNPVAALSSGMLWGCCDQTADNEKYAKCVKCHKAYHYTCLSFADDYNVPAKWHCPECLNSGPKQSKSDNTPLRNISTTRGNKRQAIGSPPQAPVEIALAPDDIRLLIQEAVKKEQAEMLSKFIENMKLTLNQQLQPIKDQMENMEKSMAFMNHQYEDLLKEYTASKENMKELQRENSEMKVCINDLTSRISQLEQQTRADNVEIQCLPEKKQENLIDIVSHLSKVVGSGIKDHDIKHCTRVAKQNASNSRPRAVVVQLASPRSRDQFLAATIKFNKSNPDNKLNTTHLGYSGPKSPIYITEHLSTTNKALHAAARIKAKEIGYQFVWVRGGRIFMRKAQESEHILIRNKDSLNKLG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01285562;
- 90% Identity
- iTF_01062823;
- 80% Identity
- -