Nfla013410.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nineta flava
Gene Symbol
TFIP11
Assembly
GCA_963920215.1
Location
OY986042.1:105567094-105571898[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-93 1.9e-89 300.5 15.4 1 275 399 671 399 671 0.97
2 2 0.0019 25 4.9 0.3 239 272 680 713 672 716 0.84

Sequence Information

Coding Sequence
atgtcgGGCGATGaagttgaaaaatttgaaattacagACTATGATTTGGATAAcgaatttaatataaatcgTCCACGAAGACGACCCACAAAACATCAACAAATCTACGgtaTTTGGGCTGATGATAGTGAGGATGAAGATGATAACCGGAAATCAGGTCGATCATCGAAATCTAAAGCGCCTAAAAATTATTCAGCACCAATTGGATTTGTTTCGGGTGGCattcaaaagaaaaaagatGAAGAGGATGGAAAATCCTCTGAAGATGATGAGGAATCAATtacctttaacaaaaaatcaaagaaTTATGTTGCAAATAGTTCGAGTGAATCGGAAGACGATTCAAAACCATCGTTTAGTAGAGCGGCTCAACAGTATAATAATTTTACGGAAACCAGTCAAGAAACAGCTGGGCTAAGGAAAACTGGTCGTCCATCGTTAAATACACCATTAATGACGAAAGGTGTTGGAAATTGGGAGCGACATACTAAAGGAATTGGCGCTAAACTTCTGTTACAAATGGGATACAAACCTGGTATGGGTTTGGGTAAAGATTTACAAGGTATTGCAAGACCTGTTGAAGCACATTTACGTAAAGGTCGTGGGGCAATTGGAGCTTATGGACCAGAAAAGGCTGCAAGCATTGCAAAAGAAaagGCTGATGATCTTGATGATTCAAAACAATCAAAAGATAAGCAAAATAAGTGGAAAAAAGACGATGTTgccataaacaaaaaaagtcgatattattataaaagtgtTGACGATGTCATTGAAAGAGGGAAGCAGCCTGGAGCATATCGAACAGTCGATTTGACGAGtaaTTTAAGTAAGGTGAAAGTCATTGATATGAGGGGTCCTGAACAACGTGTTCTCAGTGGTTATCATGCTTTGAGTGGTCCAAAAAAACCAGAAGGTGAAGGTGAATTATTTGAAGATATTGttcacaaaaaatgttcaaattttgCGTTACCAGAATTACAACATAATCTGGATCTGCTTGTTGATATTTGTGAACAGGATATTATTTGGGTGGATCGAAAAAAACGGCATTGTTCTGATCGTGTTGTAGCATTGGAACAAGAACGTAAAGCATTAACAGAAGTTACCGAAAAACAAGGGCGACAAATGAAAACGTTACAGTCATTATTGGATATTGTTGAACGTTTGGTTGATCCATCGCACGCACTGTCCCTTCGACAAGTTGCTGATGAATTTAAAGATTTACAAGAAAactattttgaagaatatttaaTATACGATTTAGGAGAATTGGCACCAGGACTTGTTGGTCCATTATTAACATCAGCTTTAGTTAGTTGGAATCCGTTAACAGCCCCAAATCAATACACAGACGTGTTTCAACAATGGAAAGAAATTCTCGATCGAACCAATCAACGTGGTACACTGACAGTTCATGCTCAAAGTGTATCACAACCATATAATAATTTAGTATGGTCTACGTGGATGCCGGTAATTCGGGCAGTAGTTTCCACATGGAGTCCTCGCGATTGTGATCCATTAATACGTTTGCTGGATATTTGGAAACCAATTATACCAATGTGGATAATGGAAAATTTGTTAGAACAAGTTATTTTACCACAAATTAATTCAGAAGTATTACAATGGAATCCATTAACGGATACAGTTCCTATACATGTATGGATTCATCCATGGATCCCATTGATGGGCAATCGGTTACAAGATAATGTATATCCAATTATTGAAGATAAACTGGGTACAGCTTTAAGTAGTTGGCATCCATCAGATCGCTCTGCTAAATTAATGTTACGTCCGTGGCAACCGGCTATGTCTCCTGGTGCATTTGCagcatttttacataaatatattttaccgaAACTTCAAGTTTGCTTGTCGAGCTTACTTATTAATCCACACCAACAGCATTTAgatgcTTGGAATTGGGTAATGGATTGGTCAGATATGTTAAGCTCTCAAGCAATGTCCATACTActtgataaatgttttttacctcGATGGCTACAAACTTTAGCGTTATGGTTAAATCAACAGCCAAATTATACTGAAGTAACTGATTGGTTTATTGGTTGGAAAGGAATGTTTTCGGAACAGTTATTACAACAACCTGCTGTTAAAGaGTGTTTTCGTAAAGCTTTGGAATTAATGAATCGTGCAGTGAAACAACCAACTGGTCAACCTGGTGCACTTGAAACTGTatcatatttaacaaatttagaaacaaatttaCCACCACCGCCGCCTCCAATTATATCAAATACACATTCAGAGAGTTTAGCACATGCTGTACGTAATGCAAGTCAAATGCCACAAAGTTTAAGCTTTAAAGATATTATCGCAAAGAATTGTGAAGAACGTGGAATATTATTTGTACCAATACCAAATCGTTACCGTGAAGCAAAACAAGTGTATCGCATAGGAAATGGTTCAACACAATGTTATATTGATAAGAATGTTGTATTTGCAACGACAAATGGTACAAATTGGGCAcccacaaatttaaataatttattggatATTGCATAA
Protein Sequence
MSGDEVEKFEITDYDLDNEFNINRPRRRPTKHQQIYGIWADDSEDEDDNRKSGRSSKSKAPKNYSAPIGFVSGGIQKKKDEEDGKSSEDDEESITFNKKSKNYVANSSSESEDDSKPSFSRAAQQYNNFTETSQETAGLRKTGRPSLNTPLMTKGVGNWERHTKGIGAKLLLQMGYKPGMGLGKDLQGIARPVEAHLRKGRGAIGAYGPEKAASIAKEKADDLDDSKQSKDKQNKWKKDDVAINKKSRYYYKSVDDVIERGKQPGAYRTVDLTSNLSKVKVIDMRGPEQRVLSGYHALSGPKKPEGEGELFEDIVHKKCSNFALPELQHNLDLLVDICEQDIIWVDRKKRHCSDRVVALEQERKALTEVTEKQGRQMKTLQSLLDIVERLVDPSHALSLRQVADEFKDLQENYFEEYLIYDLGELAPGLVGPLLTSALVSWNPLTAPNQYTDVFQQWKEILDRTNQRGTLTVHAQSVSQPYNNLVWSTWMPVIRAVVSTWSPRDCDPLIRLLDIWKPIIPMWIMENLLEQVILPQINSEVLQWNPLTDTVPIHVWIHPWIPLMGNRLQDNVYPIIEDKLGTALSSWHPSDRSAKLMLRPWQPAMSPGAFAAFLHKYILPKLQVCLSSLLINPHQQHLDAWNWVMDWSDMLSSQAMSILLDKCFLPRWLQTLALWLNQQPNYTEVTDWFIGWKGMFSEQLLQQPAVKECFRKALELMNRAVKQPTGQPGALETVSYLTNLETNLPPPPPPIISNTHSESLAHAVRNASQMPQSLSFKDIIAKNCEERGILFVPIPNRYREAKQVYRIGNGSTQCYIDKNVVFATTNGTNWAPTNLNNLLDIA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00238914; iTF_00332357;
90% Identity
iTF_00332357;
80% Identity
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