Ngue048095.1
Basic Information
- Insect
- Nephrotoma guestfalica
- Gene Symbol
- lrrfip2_1
- Assembly
- GCA_963691935.1
- Location
- OY829915.1:76149258-76161577[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.055 3.7e+03 -1.2 0.4 144 191 210 260 175 280 0.56 2 3 3.8e-104 2.5e-99 334.2 28.9 1 299 353 662 353 663 0.92 3 3 0.15 1e+04 -2.6 4.5 220 244 691 715 667 737 0.45
Sequence Information
- Coding Sequence
- ATGTCGTCAAATAGTAGTAACGCTAGTAATAAGGATGTGCTAATCCTTAATATTGCACACACAAGTGATAATGATACCATTAAAAGTATTCCAAATGGAAGcataatcgaaataaaaacaaatggtgATTTAGTAACACCACCTATCGTACAAAATGGAAactcaaataataatataagcaaaataaatttggattacaCAGAAAACATTGATAATAAAACGattatttctttgaatggtGATGGTGGTGAAATTTTATGGGattcaaatcataaaatttcaaatactaGTATTAGTAGTGCTAGCAACTCAATAAGTATTAACACAAGTGCGGATGAGGATTGTGCAAACGATATATTCGGTGAAGAGGACAATGGTGAAGAGTTTAATTTGTCCGATAGTGAATTTGAAGAGATACtagacgacgacgacgatgaAGACGAGgatcaaaatgattttcatgATGCCTCTTCGGATCATGTCGATAGTGGCTGTGGTGGTATTGTAAAAAATACAGATGATAATGGTTCGTATGATAGTTCGATTGTAAAAGATATTATCGATACAGTCGATAAAATACAAGATAATGATaaaaatgtgataaaaattataaataattatcataatGAGTTCGATGTGCATGACAGTTTGATTAATAATTGTAACGATGATGaagtaaataatttagtaaataaaattgaaatcaataaagCACAAGACGAAAAtagtattataaataatagtgGCCTAATTTTTAGTGATAGTGATAAGAATATAATCGATAgtgatagtaataataataatacaaatatgttaaaCGAAAGTATAAATACTCGACTTGTTAATCACCATTTATCAACGTCGACGCCAATAAATCGTTCACCATCGCTTCCCGAAGAGCCAGGTATGGAGATACTGGGCAGTTTACACCAGCGACGAAAATCTTCATTGCACACAAGTAACCATCATCAGTATTTGCTGCACGATAACAACGGCGGTAATAATCATGAAGATGATGAAGCTATTGTTAATATCTTGGGAAAGGATAACGAAATAgcAGAGGCAAGACTGGCAGCACGTCGGCAAGCTCGGGCAGAAGCACGAGAAATTCGTATGCGCGAACTGGAGCGACAACAAAAGGAACAGGAACAAAATGCAGATCGGGTTTTCGATATGCAAACGGCAGCCGGTATCGATCCTTTGTCACGATCACGTATAGCAGCACTGTCTACACCGACCACAATATCAACGGTGCGCGGTAATTCAATGTCATCGCGACGTAGCAGTGAAGACTCTCTTGAGGAGGAGGGTCGCAGTCTACGCGATCTACGACATGAGATCAAGGAGGTTGAGGAACGATTTCGTAAGGCAATGATCGCCAACGCTCAATTAGATAATGAACGATCttcacaatcatatcaaatacaATTGCTGAAAGACAAGCTGGAAGAAATGGAAGAGTCGCATGCGCAATTGCAACGTGAATATCGGGAAAAATGTCGTGATCATGATGCCTTAAAACGGAATAATGATAAGCTGCAAGAGGAGCTGAAATTAGTACAGGGCCAATTGAACGAACGTGATACATTAATTGCTGAACAAGGTCTAGTTATAGTTACGATTGAGGATGAAAATGGTACAGATGCACGTCGTGCTCTAGTCAGTGCAGAAAATGCACATTTATTGGAAACATCTCAGGGTTCTTTAGATGTAAGACTTAAAAAGTTCGCCGCTGATCGAAAACAATTCGAAAATGATATACAACAGCTTCAACAACAATTATCGGAGGCGCGAACACAGGGGCGACGATCTAATTCGATGAATGGCCCAACAGGTGATGAAGATCATGAAGATGTTCCACGTAAGTCCATTATTGGTTCAGACAACATAAATTTGCTAAAACCAATTGCAATTCCAGGAGATTCAACAAGTAAATTATTAGCcgaatgtaaatataaattacaaaaagccGATCAGGAAATATTAAGCCTTCAAGCAAGTTTAGCACGTTCCGAAACTCAAGTAATACGATATAAGAGTACAGCAGAGGCGGCTGAAAAGGCGGAAgctgaattaaaaattgaacggCGTAAACTGCAACGGGAGaaTCGCGAAGCCATGGAACGTCTAGAAGAGTTAGAAACATCAAATAATCATTTACTCAAGCGTTTGGATAAGCTTAAAAACGCGAAAAGTACATTACTTAAAGAGCTCTGA
- Protein Sequence
- MSSNSSNASNKDVLILNIAHTSDNDTIKSIPNGSIIEIKTNGDLVTPPIVQNGNSNNNISKINLDYTENIDNKTIISLNGDGGEILWDSNHKISNTSISSASNSISINTSADEDCANDIFGEEDNGEEFNLSDSEFEEILDDDDDEDEDQNDFHDASSDHVDSGCGGIVKNTDDNGSYDSSIVKDIIDTVDKIQDNDKNVIKIINNYHNEFDVHDSLINNCNDDEVNNLVNKIEINKAQDENSIINNSGLIFSDSDKNIIDSDSNNNNTNMLNESINTRLVNHHLSTSTPINRSPSLPEEPGMEILGSLHQRRKSSLHTSNHHQYLLHDNNGGNNHEDDEAIVNILGKDNEIAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMQTAAGIDPLSRSRIAALSTPTTISTVRGNSMSSRRSSEDSLEEEGRSLRDLRHEIKEVEERFRKAMIANAQLDNERSSQSYQIQLLKDKLEEMEESHAQLQREYREKCRDHDALKRNNDKLQEELKLVQGQLNERDTLIAEQGLVIVTIEDENGTDARRALVSAENAHLLETSQGSLDVRLKKFAADRKQFENDIQQLQQQLSEARTQGRRSNSMNGPTGDEDHEDVPRKSIIGSDNINLLKPIAIPGDSTSKLLAECKYKLQKADQEILSLQASLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMERLEELETSNNHLLKRLDKLKNAKSTLLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01454842;
- 90% Identity
- iTF_01051936;
- 80% Identity
- -