Basic Information

Gene Symbol
Kdm5
Assembly
GCA_030068015.2
Location
CM061524.1:104631783-104638378[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.8e-26 1.1e-22 80.4 0.1 2 89 222 305 221 305 0.94

Sequence Information

Coding Sequence
ATGGCGAGCAAGGTATCAGCGGTAGATGTTTCGGCTGCATCTACTTCGACAAGTAGTGCAAGTGGCAATACCACTCCAGCTCGCCGTCTGCGTACCCGAACTTCAACAGGAGGAAATGTGAGCGGTGGTGATTCaggaaaaaagaataataacaataacagtaacGCGACAGAACGCAATATGAATTCGTCagactcaaataaaaataatgcaggACCTAATAATTCCGCAACCGTAACTTCGAGCGGCGCAGGTGGTGGTAGTTCAGTTGACGAGAAACAAAGTACCAATAACGGTTTAAATGTAGCTAATGGATCAGgcaaaaaatatcataatagTTGTCCTCATCTAACAAATGAACGTAGCAGGAGTAAACTACTACCACATTTACAACCACACAGCTCtagtacatttaatttaaataaaacagaggAATTTCATTTCGATACCCCGGTAGAGTGTCCTGTTTTCCGTCCTACACAGGACGAATTTAAGAATCCACTGGCTTACATAAGTAAGATAAGACCCATTGCTGAGAAATGTGGCATAGCAAAAATCTTACCACCAGAATCTTGGTCACCACCTTTTGCTGTAGACGTGGATAAATTGAAATTCACTCCACGCGTACAACGTCTTAATGAATTGGAAGCAAAGACACGCgtgaaacttaattttttggatCAAATTGCTAAGTTTTGGGAACTTCAGGGTTCttcattaaaaataccaatGGTAGAACGTAAAGCTTTGGATTTGTATACATTACATCGAGTTGTCCAAGAGGAAGGTGGCATGGAACAAACTACGAAGGAACGCAAATGGGCAAAAGTAGCAAATCGTATGATGTATCCGTCGAGCAAAAGTGTCGGCGCAACATTAAAATCTCATTATGAGCGTATCCTTCATCCATTTGAGGTTTATACTTCCGGTAAAGTGTTGGGATCGGGGACAAGCACTAACACCGGCATTGATGCCGTAAAATTGGAAGACGGTACGGATTATAAGACACATGAAATTCCAACACGACAACAAATTACACCGCCTAATGAAACTAATGCTCGACGATCGAAGCGATTTGCAAATTCCAGTGCCAATTGTGGTCTGGGCAATACAACATCGCGTTGCAATGTGAAAACTGAATCCAAGGAAGATTGCAAGCGTGatcttttaaatagttttaatgtTACCGGTTCTTCAACATCTTCAACTGCAACACGTATCCAAACTGGAGGAACTGGTTTGGTGAATTCTTCAGCTCAAAAAAAAGCACCGGATCCCCAAATAGTTGATCCCTTGATGAAATATATTTGTCACATCTGTAATCGTGGTGACGTAGAGGAATCGATGTTATTATGCGATGGATGTGATGACAGTTACCACACATTTTGCTTACTACCACCATTGTCAAGCATTCCAAAAGgcGAATGGCTTTGCCCACGTTGTGTTGTAGAAGAGGTAAGCAAGCCTACCGAAGCATTTGGCTTCGAACAGGCAGAACGAGAATATACATTGCAGCAATTCGGGCAAATGGCGGATCAATTTAAAATGGACTACTTTCGTAAACCAGTGCATCTAGTACCTACGCATTTAGTGGAACGGGAGTTTTGGCGCATTGTTTCTTCGATTGATGAAGATGTGACTGTGGAATATGGTGCCGATTTGCATACCATGGATCATGGTTCAGGTTTTCCGACGAAAAGCTCTTTATATTTACTTCCCGGCGATCAGGAGTATGCTGAATCCAGTtggaatttgaataatttaccCTTACTGGAAGATTCCATATTGGGTCACATTAATGCTGATATAAGTGGTATGAATGCACCATGGATGTATGTGGGTATGTGTTTTGCAGCCTTTTGTTGGCATAACGAAGACCACTGGAGCTATTCGATTAATTATTTGCATTGGGGAGAACCGAAAACTTGGTACGGTGTACCCGGATTATGTGCTGAGCAATTTGAAGAGACAATGAAACAGGCAGCTCCCGAACTCTTTGCTTCCCAACCCGATTTATTACATCAATTGGTAACTATAATGAATcccaatattttaatgaataatgGGGTGCCTGTTTATCGCACTGATCAGAATGCTGGTGAATTTGTAATCACATTCCCGCGCGCATATCATGCTGGCTTCAATCAGGGTTATAACTTTGCTGAAGCAGTAAATTTTGCACCTGCTGATTGGCTCAAAATGGGCAGAGAGTGTGTCAATCATTATTCAATGCTACGtagattttgtgttttttctcaCGATGAGCTTGTATGTAAAATGGCACTAGAGCCAGCAAAATTGACCTTTGGTATTGCTACGGCATGTTATATTGACATGGCAGAAATGGTAGATTCCGAAAAGAAACTACGTAAATCTTTACTCGAATGGGGTGTCACTCGTGCTGAACGAAAAGCCTTCGAACTGGTACCAGATGATGAGCGACATTGTCAAGAATGCAATACCACATGCTTTTTGTCAGCCGTCTCATGTGAGTGTACTAAAGCAATCGTTTGTCTACGCCACTATACGGTTCTATGTGATTGCACACCGGAAAAGCACACACTCTTATATAGATATACACTCGATGAAATGCCACTAATGTTGCAGAAACTAAAAGCCAAGGCGCAGAGCTTTGAGCGGTGGTTATCACGCTGTCGCGATATAGTCGATGAAAACACACCCACTTCTGCACCGTTATCCGAACTACTAGAATTATGTAAGGAAGCGGAAGTGAAGAAATTCCCATCATCACTCTTAATAGATCGTCTACACACCGCCATTGGTGAAGCTGAGAAGTGCGTAACTGTTATCCAGCAATTGGGTATAAACAAGGTACGCACCCGTTCTGACAATAACCAGGAAGCGGCACAGTACAAACTTACAATGGAAGAATTGGAATTATTTGtacaagaaattaataatttatgttgCATTATAGAGGAGGGTACATCTGTACGTGAGCTTCTCGTTCTTGGTAAACAATTTTTGGAGCGAGCAAATGCATTATTGGATCGTTCCCTTGACTGTTTGGAGGAGCCTGAAATAGAACAATTAATTAATGAGGGCAACTCACTTCGAATCGAATTGCCGCAGATTAATCAATTGTACATGCGTCAGAAGCAAATCAAGTGGTTTAAACGTTCGCAAGGTATGCGAAACGGCAGCAATAAGCTGACATATagtgacataaaaaatttactcaccAGCGCAGCAGCCGAAGTGGATCCAACTGATGCAATTATCGATaaagaaatgagaaaattacAGGAGATCGGTGCTGCAATTGAGGCATGGGAGAAGCAAGCAACACGTTATTTTCGTTGTACTACACAACAACATGAGTTGGTCGATATTGAGCATTTCTTGAAAACAGCATCGGAAATCGATGGTCAGGTGCCGTCATACGTTACACTTAAGGACGCATTGCGTAAAGCTAAAGAATGGTTGCAATCGGTTGAACAATTGCAGACCAATGACCATTTTCCATACTGTCATACACTCGAAGCAATTGTGCAGCGTGGCAAGAATATACCTGTACAATTGGAAGAATTGAAACGTATGCAAGGTCATTTAAATAGTGCACACGAGTGGAAGGACAATACTGCTCGTgtctttttaaagaaacaaacatTTTATACTCTACTCGAAGTACTAATGCCCCGTTCCGAACCGGTGATTATCGACTCCGAAGGAAAACAACCATTTCAAGATGACTTCGTAAAAGAAATGAATCCTGCGCAAATAGTAGATTCATTTAAGAAGGCCGAAGAGAAAGAATTGCGCGATATGCGTGAGCTTAGACggcaaaatatgttgaaaaacccACTCAAGGATATGTATTGCCTGTGTAAGACACCATTTCAAGGTGTAATGTTTAATTGTCAACTTTGTCGTGATTGGTTTCATGAAGACTGCGTTCCGCAGCAGTCCAATTTATCCACTGGCAGTAATTTTATGTCGCGCCCGAAATGGCTTTGTCCTTCGTGTGTGCGATCAAAGCGACCACGGCTAGAAATTATTCTTCCGTTATTGGTGTCTTTACAGCGTTTACCAATCCGTTTGCCGGAAGATGAGGCATTGCGTTGTCTCGCCGAACGCGCTATGAATTGGCAGGATCGAGCTCGTAAAATTTTAACTAGTCCAGATGTAACGGCCGCACTCGAGGCAATAAAAGCtcaacaaagaaaacaaaaacgaaaaggTGTCTTTGGAAATGGTTTGTTGGAAGGTAATAATTTACGTAAACAACAGCGACGGAGGAGCAATCATAATTCCAAAGATATTGCTTCTGCCGATAATCCAGATAATAgcagtgatgatgatgatgaagatggtCGGCTACATATTGTTGAGGACACCTACAGCAATGATGAGGAAGAGCTTTTCAATATAGATGCAGCACTACCGCCTGAGTTGCAAAAGTTATTGTCCGACAGTGAAAAGGAAAATCTGAATGACTTAATGATGGAAGGCGACCTGCTGGAGGTATCTTTGGATGAATCACAGgaattatggcgtattttgtctGCTATTCAACCAATCGGTGCTGCAGAAGCAACAGCACTCCAAAAGCAACatcaattacaacaaaaacaacaagcaagATCAAATGTCAATTCAGCTGCAGAAGATTCAAACGATAGCCTATTGGTACAGAGTAGTCCCAATAGCAACAGTGGCAGTTTTAGTGTGCGTAACCCAAGCGGAAATATTAAGAAACGTCGTTCGTTAGAACCTCTTAATAGTAGTTGCCCGTTACCGCGTAAAAAGACTGCAACAcccaataaaaatttgaattctacAACTAAAAAGTCTACACGTAAATCAACATCAGACACAACCACTAAGCAACAACCTAACGAAGATACTGGTGATAATCGGCAGCAAACAAATGGTGGTACTGGTACAGTGAACAACTCGAACAATCAATCACAATCAGCTCAGAAGAGACGCAAACGTACGGGAATTAATGCGAATAATGGCAACAATATTATCGGTCAGAAGAAGCATTCACCACGAAACCAAACGGCGCAACAAGAGGATGATGAAGAGGAATGTCGTGCAGAAAACTGTCATAAACCAACCGGACGTGAAGTTGATTGGGTACAATGTGATGGTGGATGTAATGAGTGGTTCCACATGTTCTGCGTTGGCTTGAATCGAAGTCAGATAAAGGCAGATGATGATTATTTCTGTATACGTTGCTCGAAAACGGTAAAATCGACGGACGTATCAAGCGGTACAAATAATAATGCCACCATGTCTGCAATTGAAACTGCTGTAACGGCAACAACGACCACGTCCTTTGTCCATGCAAGTGGTAGTATTAATAACAATAACTCTTTGAGTGCAGGAGGATTAACAGTACAGCAACCCACGACAAACACCGCTAACTCCACAAAGGGTAAAGCACAAACAGTGCGGTaa
Protein Sequence
MASKVSAVDVSAASTSTSSASGNTTPARRLRTRTSTGGNVSGGDSGKKNNNNNSNATERNMNSSDSNKNNAGPNNSATVTSSGAGGGSSVDEKQSTNNGLNVANGSGKKYHNSCPHLTNERSRSKLLPHLQPHSSSTFNLNKTEEFHFDTPVECPVFRPTQDEFKNPLAYISKIRPIAEKCGIAKILPPESWSPPFAVDVDKLKFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRVVQEEGGMEQTTKERKWAKVANRMMYPSSKSVGATLKSHYERILHPFEVYTSGKVLGSGTSTNTGIDAVKLEDGTDYKTHEIPTRQQITPPNETNARRSKRFANSSANCGLGNTTSRCNVKTESKEDCKRDLLNSFNVTGSSTSSTATRIQTGGTGLVNSSAQKKAPDPQIVDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLSSIPKGEWLCPRCVVEEVSKPTEAFGFEQAEREYTLQQFGQMADQFKMDYFRKPVHLVPTHLVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGLCAEQFEETMKQAAPELFASQPDLLHQLVTIMNPNILMNNGVPVYRTDQNAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDSEKKLRKSLLEWGVTRAERKAFELVPDDERHCQECNTTCFLSAVSCECTKAIVCLRHYTVLCDCTPEKHTLLYRYTLDEMPLMLQKLKAKAQSFERWLSRCRDIVDENTPTSAPLSELLELCKEAEVKKFPSSLLIDRLHTAIGEAEKCVTVIQQLGINKVRTRSDNNQEAAQYKLTMEELELFVQEINNLCCIIEEGTSVRELLVLGKQFLERANALLDRSLDCLEEPEIEQLINEGNSLRIELPQINQLYMRQKQIKWFKRSQGMRNGSNKLTYSDIKNLLTSAAAEVDPTDAIIDKEMRKLQEIGAAIEAWEKQATRYFRCTTQQHELVDIEHFLKTASEIDGQVPSYVTLKDALRKAKEWLQSVEQLQTNDHFPYCHTLEAIVQRGKNIPVQLEELKRMQGHLNSAHEWKDNTARVFLKKQTFYTLLEVLMPRSEPVIIDSEGKQPFQDDFVKEMNPAQIVDSFKKAEEKELRDMRELRRQNMLKNPLKDMYCLCKTPFQGVMFNCQLCRDWFHEDCVPQQSNLSTGSNFMSRPKWLCPSCVRSKRPRLEIILPLLVSLQRLPIRLPEDEALRCLAERAMNWQDRARKILTSPDVTAALEAIKAQQRKQKRKGVFGNGLLEGNNLRKQQRRRSNHNSKDIASADNPDNSSDDDDEDGRLHIVEDTYSNDEEELFNIDAALPPELQKLLSDSEKENLNDLMMEGDLLEVSLDESQELWRILSAIQPIGAAEATALQKQHQLQQKQQARSNVNSAAEDSNDSLLVQSSPNSNSGSFSVRNPSGNIKKRRSLEPLNSSCPLPRKKTATPNKNLNSTTKKSTRKSTSDTTTKQQPNEDTGDNRQQTNGGTGTVNNSNNQSQSAQKRRKRTGINANNGNNIIGQKKHSPRNQTAQQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMFCVGLNRSQIKADDDYFCIRCSKTVKSTDVSSGTNNNATMSAIETAVTATTTTSFVHASGSINNNNSLSAGGLTVQQPTTNTANSTKGKAQTVR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2