Basic Information

Gene Symbol
Kdm5
Assembly
GCA_963971545.1
Location
OZ020609.1:61368127-61387007[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.9e-26 5.4e-22 80.4 0.1 2 89 225 308 224 308 0.95

Sequence Information

Coding Sequence
ATGTCGACCAAAGTAAGTGTTGCTGAAGGAAGTTGTGTTTCGGCAGCATCAACATCAACAGCCGCGAACAACGGCAACACAACACCGGCTAGACGACTACGCACTCGAACGTCCACTGGGGGAAATGTGAGTGGGAGTGACTCAGCTAAAAAGTGCAACAATAACTCCAATGGATCCGATCGCAATATCAACCCGCtggattcaaataaaaataacgatGGTGGAGCCAATAATACTGGTTCAGGATCTTCGGCCACAGGAATAAATTCATGTGATGataaacaaaacacaaataattGTTGTGGTACAAATTCTACCACGGGATCTGCCAAAAAGTACCACAACAGTTGTCCTCATCCGACAAATGATCGGGCTCGAGCTAAACTAATAGCACATTTACAGCCCCACAGTTCCagtacatttaatttaaataaaacagaagAATTTCACTTTGATACTCCAGTTGAGTGTCCCGTTTTTCGTCCTACTCAAGATGAATTCAAAAATCCACTCGCTTATATTAGTAAGATTCGGCCAATTGCAGAGAAATGTGGTATTGCAAAAATCTTGCCACCAGAGTCTTGGTCACCACCATTTGCCGTAGACGTCGACAAATTGAAGTTTACTCCTCGCGTGCAACGTCTTAACGAATTGGAAGCAAAGACTCGTGTTAAACTTAATTTCTTAGATCAAATTGCCAAGTTTTGGGAATTGCAGGGTTCTTCGCTAAAAATTCCAATGGTTGAACGTAAAGCGCTAGATTTGTATACCTTGCATCGCTTTGTTCAAGAAGAGGGCGGTATGGAACAAACAACGAAAGAACGCAAGTGGGCGAAAGTTGCAAATCGCATGTCGTATCCATCGAGCAAAAGCGTTGGTGCAACATTGAAATCTCATTATGAACGAATACTTCATCCATTTGAGGTTTACACATCAGGTAAAGTACTAGGATCAGGTACTAGCGTGGATACAGTGAAGCTGGAAGATGGCACTGATTATAAGGCACACGAAATACCAACCCGACAACAAATTGCACCACCAAATGAAAGCAATGCTCGACGTTCTAAGCGCTTTGCTAATTCAAGCGCCAATTGTGGTTTGGGTACCGCAGCGCGTAACAATATCAAAGTCGAAACAAAGGAGGACTTTAAACGGGATCTATTGAATTGCTTTAATGCTGCCGGTGCCTCTACATCGTTAATTGGTGTACGTCGCCAAAGTTTTGGTACAGCTTCAACCAATGCTACCGCACAAAAGAAAACACCTGATCCACAAATAGTTGATCCTTTGATGAAATACATTTGTCATATATGTAATCGCGGCGATGTAGAAGAGTCAATGCTGCTGTGCGACGGTTGCGATGATAGTTATCACACATTTtgtttgctgccacctttaacCAGCATCCCAAAAGGTGAATGGCTTTGCCCACGTTGTGTTGTGGAAGAGGTAAGCAAGCCAACTGAAGCATTTGGTTTCGAGCAAGCTGAACGGGAGTATACATTGCAGCAATTTGGACAAATGGCGGACCAGTTTAAAATGGATTATTTCCGTAAACCAGTCCATTTAGTACCTACACATTTAGTGGAGCGCGAGTTTTGGCGCATTGTTTCCTCCATTGATGAAGATGTCACTGTAGAATATGGTGCAGATTTGCATACTATGGACCATGGTTCGGGATTTCCAACAAAAAGTTCTTTATATTTACTACCTGGTGACCAGGAGTATGCAGAATCTAGTtggaatttaaataatttaccatTACTAGAAGACTCCATATTGGGACATATTAATGCTGACATAAGTGGTATGAACGCACCATGGATGTATGTGGGAATGTGCTTTGCAGCCTTTTGCTGGCATAACGAAGATCATTGGAGTTACTCCATTAACTACTTGCACTGGGGAGAGCCAAAAACTTGGTATGGTGTACCAGGCTTTTGGGCAGAGCAATTTGAAGAGACCATGAAACAGGCAGCTCCTGAATTATTTGCTTCACAACCAGATTTATTACATCAATTAGTAACTATAATGAATCCGAATATTCTAATGAATAACGGGGTACCCGTTTATCGGACAGATCAAAATGCTGGAGAATTCGTTATTACATTTCCTCGTGCTTATCACGCTGGCTTCAACCAAGGATATAATTTTGCAGAGGCTGTCAATTTCGCACCAGCTGACTGGTTGAAAATGGGACGAGAGTGTGTGAATCATTATTCAATGCTGCGACGTTTCTGTGTTTTCTCACACGATGAACTTGTTTGCAAGATGGCATTGGAACCAGCTAAACTAACATTTGGTATTGCAACAGCTTGTTATATTGACATGGCAGAAATGGTCGATTCAGAAAAGAAGCTACGCAAATCTTTACTTGAGTGGGGAGTGACGCGCGCTGATCGGAAAGCATTCGAGCTAGTGCCCGACGACGAAAGACATTGTCACGAATGCAATACTACCTGTTTTTTATCAGCTGTTTCGTGTGAATGCACCAAGTCAATCGTTTGTCTGCGCCATTACACTGTTCTGTGTGACTGTTTACCAGAAAAGCATACGCTACTTTACAGATACACTCTCGACGAAATGCCTTTAATGTTACAAAAACTTAAAGCCAAAGCTCAAAGCTTTGAACGATGGTTATCAAGGTGTCGCGATATTGTCGATGCAAATACTCCTACTTCCGTGCCGTTAACCGAATTACAGGAGTTGTGCAAAGAAGCTGAGGTTAAAAAGTTTCCATCATCACTACTAATAGATCGTTTGAATTCAGCTATAATTGAAGCTGAAAAATGTGTTACTGTCATTCAGCAATTGGGAATCAATAAGgtTCGCACTCGTTCCGACAATAACCAGGAAGCAGCTCAGTATAAACTTACAATGGAAGAATTGGAATTGTTCGTGCAGGAAATCGACAATTTGTGTTGTATTATAGAGGAGGGTACATCGGTACGAGAATTACTTGTTCTTGGTAAACAATTTTTGGAACGTGCAAACGTCTTATTAAGCCGCTCAATTGACACATTGGAAGAGCCAGAAATAGAACAACTGATCAGTGAAGGAAATTCGCTTCGAATAGAACTACCTCAGACGAGTCAGTTGTATATGCGTCAAAAGCAATTGAAATGGTATAAACGTTCGCAAGGTATGCGTAATACTAGTGCTAAATTAACGTATAATGATATAAAGAACTTACTGGCAAGTGCGGCAGCCGAATTAGATCCAACCGATCCAATTATCGATAAGGAAATGCGAAAGTTACAACAAATTGGTGCCGCAATCGAAGCATGGGAAAAACAGGCTGCACGATATTTCCGATGCACCACTCAACAGCATGAACTAGCCGACATTGAACAGTTTTTGAAAACCGCTACCGAAATAGAGGGCCAGGTGCCTTCATATATAACACTTAAAGATGCATTACGAAAAGCCAAAGAGTGGTTGGTTTCCGTAGAACAGCTCCAGACTAACGACCATTTCCCCTACTGTCATACTCTGGAAGCAATTGTACAGCGTGGCAAGAACATTTCCATCCAACTTGAAGAGTTGAAACGCATGCAGGGACATTTAAATAGTGCACATGATTGGAAGAACAACACCGCACgagtgtttttgaaaaaacaaacatattatACTTTACTTGAAGTGTTAATGCCGCGCTCCGAAGCTGTAATTATCGATTCAGATTCAAAACAACCCTTTGAAGACGATTTTGTAAAAGAAATGAATCCAGCGCAAATAGTTGATTCCTTTAAAAAGGCCGAAGACAAAGAACTACGCGATATGCGTGAACTGAGACGTCAGAATATGTCAAAAAATCCATTAAAGGATATGTATTGTTTGTGTAAGAACTTTTTCCAAGGAGTTATGTATAATTGTCAACTTTGCCGTGATTGGTTCCATGAAGACTGTGTACCGCCGCCTTTGGGAATGTCGACTATATCTCCAgggaatatatatatttcacgACCTAAATGGCTTTGCCCATCATGTGTTCGATCTAAGCGTCCGCGACTAGAAATTATTCTTCCGCTTTTAGTGTCACTACAACGTTTGCCTATACGTTTGCCAGAAGATGAGGCATTGCGTTGTCTCGCAGAACGCGCTATGAATTGGCAAGATCGTGCTCGAAAGGTATTAACTAGTCCAGATGTAACCGCTGCACTCGAAGCAATAATAGTGCATCAACGAAGGCAAAAACGAAAAGGCCCTAGTGGTACTGGCATAATAGCAGGTAATAATAATTCACGTAAACAACAGCGACGAAGATGCAATCGCAATTCCAAAGATGCTTGTACTTCTGATAACCCAGATAGCTCTGACGACGATGACGAAGATGGTCGCTTACATATTGTGGAGGACATTTATAGTAACGATGAGGAGGAACTATCCAATGTAGATGCTGCTCCGCCTCCTGAATTACAAAAGCTCTTGTCGGACAGcgaaaaggaaaatttaaatgaattaatgATGGAAGGTGATCTCCTTGAGGCATCCCTAGATGAATCACATGAATTGTGGCGTATTTTATCAGCAATTCAGCCAGTATGTGCTGCCGAAGCAGCTGCCCTACATAAACAACATAACCAAACCGTACAAACATTATCTAACGTTAATTCAGCTGCAGAAGATTCGAATGATAGTCTGTTAGTACAGAGTAGCCCCAACAGTAATAGCGATAGTATTAGTGGCCGGAACTCGACTGGAGTAAATAAAAAACGACGTTCGTTAGAGCCAATTAGCAGCAGCTGTCCACTGCCGCGCAAAAAGACTGCAACACCTAATAAACCTTATATTTCTTCAGCTAAAAAATCGACACGCAAATCCGCACCGGATACATATTGCAAACCATCGCAAGTCGATGACGTTTCTGAAAGTAAACAACCAAATGGTGGCAGCCTAAGCACAACCACAAACATAATTTCTGTACAAAAAAAACGTAAACGCATGGGAACGAATGTCAACAATAATAGTAATATCGTTGGCCAAAAGAAGCACTCTCAACGCAGCCAAACAGCGCAACAAGAAGACGACGAAGAAGAGTGTCGCGCAGAAAATTGTCATAAACCAACTGGTCGTGAAGTTGATTGGGTACAATGTGATGGTGGCTGCAACGAATGGTTTCATATGTTTTGCGTTGGACTAAATCGAAGTCAAATAAATGCAGATGATGATTATTTTTGTATACGTTGCTCAAGAACAATGGCTACCGGAGTTACGGTGGCAACGACTGGCGCTAGCAACACGAACTTGTCTGAAATTGAGACCACTACAACGGCAACAACAACGTCCATTATTAGTCCAGCTACAATGAGCAGTATCGTTATAGGTGCAGTAGGTgcaacaacacaacaacaattgTCAGCACACACCACTGGTTCCGCGTCAAAGGGTCGGGCACAAATAGCACGATAA
Protein Sequence
MSTKVSVAEGSCVSAASTSTAANNGNTTPARRLRTRTSTGGNVSGSDSAKKCNNNSNGSDRNINPLDSNKNNDGGANNTGSGSSATGINSCDDKQNTNNCCGTNSTTGSAKKYHNSCPHPTNDRARAKLIAHLQPHSSSTFNLNKTEEFHFDTPVECPVFRPTQDEFKNPLAYISKIRPIAEKCGIAKILPPESWSPPFAVDVDKLKFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRFVQEEGGMEQTTKERKWAKVANRMSYPSSKSVGATLKSHYERILHPFEVYTSGKVLGSGTSVDTVKLEDGTDYKAHEIPTRQQIAPPNESNARRSKRFANSSANCGLGTAARNNIKVETKEDFKRDLLNCFNAAGASTSLIGVRRQSFGTASTNATAQKKTPDPQIVDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGEWLCPRCVVEEVSKPTEAFGFEQAEREYTLQQFGQMADQFKMDYFRKPVHLVPTHLVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGFWAEQFEETMKQAAPELFASQPDLLHQLVTIMNPNILMNNGVPVYRTDQNAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDSEKKLRKSLLEWGVTRADRKAFELVPDDERHCHECNTTCFLSAVSCECTKSIVCLRHYTVLCDCLPEKHTLLYRYTLDEMPLMLQKLKAKAQSFERWLSRCRDIVDANTPTSVPLTELQELCKEAEVKKFPSSLLIDRLNSAIIEAEKCVTVIQQLGINKVRTRSDNNQEAAQYKLTMEELELFVQEIDNLCCIIEEGTSVRELLVLGKQFLERANVLLSRSIDTLEEPEIEQLISEGNSLRIELPQTSQLYMRQKQLKWYKRSQGMRNTSAKLTYNDIKNLLASAAAELDPTDPIIDKEMRKLQQIGAAIEAWEKQAARYFRCTTQQHELADIEQFLKTATEIEGQVPSYITLKDALRKAKEWLVSVEQLQTNDHFPYCHTLEAIVQRGKNISIQLEELKRMQGHLNSAHDWKNNTARVFLKKQTYYTLLEVLMPRSEAVIIDSDSKQPFEDDFVKEMNPAQIVDSFKKAEDKELRDMRELRRQNMSKNPLKDMYCLCKNFFQGVMYNCQLCRDWFHEDCVPPPLGMSTISPGNIYISRPKWLCPSCVRSKRPRLEIILPLLVSLQRLPIRLPEDEALRCLAERAMNWQDRARKVLTSPDVTAALEAIIVHQRRQKRKGPSGTGIIAGNNNSRKQQRRRCNRNSKDACTSDNPDSSDDDDEDGRLHIVEDIYSNDEEELSNVDAAPPPELQKLLSDSEKENLNELMMEGDLLEASLDESHELWRILSAIQPVCAAEAAALHKQHNQTVQTLSNVNSAAEDSNDSLLVQSSPNSNSDSISGRNSTGVNKKRRSLEPISSSCPLPRKKTATPNKPYISSAKKSTRKSAPDTYCKPSQVDDVSESKQPNGGSLSTTTNIISVQKKRKRMGTNVNNNSNIVGQKKHSQRSQTAQQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMFCVGLNRSQINADDDYFCIRCSRTMATGVTVATTGASNTNLSEIETTTTATTTSIISPATMSSIVIGAVGATTQQQLSAHTTGSASKGRAQIAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01045252;
90% Identity
-
80% Identity
-