Basic Information

Gene Symbol
Kdm5
Assembly
None
Location
JAPVRH010007995.1:9412-19471[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.8e-26 1.2e-22 80.4 0.0 2 89 164 247 163 247 0.95

Sequence Information

Coding Sequence
GAACGAAATATGAATTCTTCagattttaccaaaaataacgCAGGAAATAATAATGCTGCTCCAACTTTAGCTATAGGAGCTGGTTTGGGTGATGAAAAGCAAACCTCGAATAGCTGCACTGGTACGAATTCCAACACTGGATCAGgcaaaaaatatcataatagtTGTCCTCATCCAACAAACGATCGTGGTCGGGGCAAACCACTAACACATTTACAACCTCACAGCTCGAGTACATTTAACTTGAATAAGACAgaagaatttcattttgatacaCCGGTTGAGTGTCCTGTTTTTCGCCCTACGCAGGAAGAATTTAAGAATCCATTAGCTTACATTAGTAAGATACGACCTATTGCGGAGAAATGCGGAATAGCTAAAATTCTACCACCAGAATCATGGTCACCACCTTTTGCTGTAGATGtagacaaattaaaatttacaccaCGCGTACAACGTCTCAACGAATTAGAAGCAAAAACTCGCGTAAAACTTAATTTCTTGGACCAAATTGCCAAATTTTGGGAACTACAGGgttcttctttaaaaatacCAATGGTAGAACGTAAAGCATTAGATTTATATACCTTACATCGCATTGTTCAAGAAGAAGGAGGcatcgaacaaacaacaaaagaacGTAAATGGGCGAAAGTTGCAAATCGTATGTCATATCCATCGAGCAAAAGCGTTGGTGCAACTTTAAAAGCCCATTACGAGCGAATACTTCATCCATTTGAGGTTTATACATCTGGTAAGGTTCTAGGAGCTGGAGTGGGAGCCAGCACTAGCGTGGATGCAGTGAAGCTTGAAGATGGTACGGATTATAAGGCACACGAAATACCAACTCGCCAACAAATTACACCCCCAAATGAAAATAACGCTCGACGGTCAAAGCGCTTTGCCAATTCCAGTGCCAATTGTGGATTGAACAATTCAGCATCGCGCAATATGGTTAAGATTGAAACAAAGGAAGATTTTAAGCGGGATCTCCTGAATTGTTTTAATGCTGCTGGTTCTTCGTCCTCTGCATGTTTGGTTCGTGGTCAAACTGGTGGTACATCTTCAGCAAATTCGATTGCTCTAAAGAAAGCACCCGACCCTCAACTAGTTGATcctttaatgaaatatatttgccaCATATGCAATCGTGGTGATGTGGAAGAATCAATGCTATTGTGTGACGGATGCGACGACAGCTATCATACATTTTGCTTGTTGCCACCATTGTCCAGTATTCCGAAAGgtgAATGGCTTTGCCCACGGTGTGTTGTAGAAGAAGTTAGCAAGCCTACTGAAGCTTTTGGCTTCGAGCAGGCAGAACGAGAGTATACATTGCAGCAATTTGGACAAATGGCCGACCAGTTTAAAACGGATTATTTTCGTAAGCCAGTTCATTTGGTCCCTACAAATTTAGTGGAGCGTGAATTTTGGCGAATTGTTTCATCGATTGATGAAGATGTAACAGTGGAATATGGAGCTGATTTACATACCATGGATCATGGTTCGGGGTTTCCAACAAAAAGCTCATTATATTTGCTTCCAGGGGATCAGGAGTACGCTGAATCTAGTTGGAATCTAAATAACTTACCATTACTGGAAGACTCAATTCTGGGCCATATCAATGCTGACATCAGTGGAATGAATGCACCTTGGATGTACGTAGGTATGTGTTTTGCGGCTTTTTGTTGGCATAATGAAGACCACTGGAGTTACtccattaattatttacattggGGAGAACCAAAAACTTGGTACGGCGTACCGGGCTTTTGGGCTGAGCAATTTGAAGAAACAATGAAACAGGCAGCTCCAGAACTTTTTGCATCACAACCAGATTTATTGCATCAGTTGGTGACCATAATGAATCCgaacattttaatgaataacGGAGTGCCTGTTTATCGAACTGATCAAAATGCTGGAGAATTTGTCATAACATTTCCCCGTGCATATCATGCTGGATTTAATCAGGGCTACAACTTTGCTGAAGCTGTGAATTTCGCTCCTGCTGATTGGTTGAAGATGGGTCGAGAGTGTGTTAACCACTACTCAATGTTGCGTCGTTTTTGCGTTTTTTCTCACGATGAGCTAGTGTGCAAAATGGCACTTGAACCAGCCAAACTGACATTTGGCATTGCAACAGCTTGCTATATCGACATGGCAGAAATGGTAGACTCCGAAAAGAAGCTTCGCAAATCTTTGTTAGAATGGGGTGTTACTCGCGCTGAACGAAAAGCATTCGAACTTGTTCCAGATGACGAGCGGCATTGTCAAGAATGCAATACTACGTGTTTTTTGTCTGCTGTATCATGTGAATGCACCAAATACACATTAGACGAAATGCCATTAATGTTGCAAAAGCTTAAAGCCAAAGCACAAAGTTTTGAACGTTGGTTATCACGATGTCGCGATATTATGGATGCTAATACGCCCACTTCTGCGCCATTAACTGAGTTACAGGAGTTGTGCAAGGAAGCTGAAGTTAAGAAATTCCCGTCATCGCTACTGATAGATCGCCTGAATTCAGCCATAGTTGAAGCCGAAAAATGTGTGACTGTCATTCAACAACTAGGAATAAACAAGGTTCGTACACGCTCCGACAATAACCAGGAAGCAGCTCAATACAAACTTACAATGGAGGAACTAGAACTGTTTGTGCAAGAAATTAACAATTTGTGTTGTATTATAGAGGAAGGTACTTCCGTAAGAGAGCTTCTGTCCCTtggtaaacaatttttggaacgtgcaaattcattattaaatcGATCAATTGACTCGTTGGAAGAACCTGAAATAGAACAGTTAATAAGTGAGGGGAACTCACTTCGAATAGAACTGCCTCAGATGAATCAATTATACATGCgtctaaaacaaataaaatggtaTAAACGTGCACAAGGTGTACGAAACGGCAGTACTAAATTGACGTATAGTGATATAAAGAGCTTGCTAAGTAGCGCAGCAGCTGAAGTGGATCCAACAGATCCAATAATAGATAAGGAAATGAGGAAATTGCAGGAAATCGGCGCCGCAATTGAAGCTTGGGAAAAGCAGGCGGCACGATATTTCCAATgtacaacacaacaacatgAGTTAACTGACATTgaacagtttttaaaaacagCTGCTGAAATAGAAGGTCAGGTACCGTCGTATATAACATTAAAAGATGCATTACGAAAAGCTAAAGAGTGGTTGAATTCGGTAGAACAGTTACAGACCAACGACCATTTTCCCTATTGTCATACTCTTGAAGCAATAGTTCTGAACGGTAAAAGCATTCCCATACAACTTGAAGAATTAAAACGCATGCAGGGCCATTTGAATAGTGCTCATGAGTGGAAAAGTAATACTGCTCGCGTCTTTTTGAAGAAACAAACATTCTATACATTACTGGAAGTGCTGATGCCGCGTTCTGAATCTGTCATAATTGACTCGGATTTAAAACAACCATTTGAAGATGGGTTTGTAAAGGAAATGAATCCTGCTCAAATAGTAGATTCCTTTAAAAAGGCTGAAGAAAAAGAATTGCGTGATATGCGCGAACTTAGACGacaaaatatgtcaaaaaatccattaaaagACCTGTATTGCGTATGTAAATCTCCATTCCAAGGAGTAATGTTTAATTGCCAGCTCTGCCGTGATTGGTTTCATGAGGGTTGTGTGGCGCCGTCACTGGGggtatcaaatataatttcgggaaataatttaatatcacGTCCGAAGTGGCTTTGTCTGTCATGTGTTCGATCAAAGCGCCCCCGGCTCGAAATTATTCTGCCGCTTCTGGTGTCGTTGCAACGTTTGCCTATACGTTTACCTGAAGATGAGGCATTGCGTTGTTTAGCGGAACGTGCCATGAATTGGCAAGATCGAGCCCGTAAGGTGTTGACAAGTCCAGATGTAACCGCCACGCTTGAAGCAATTATAGCGCAACAAcgtaaacaaaaacgaaaggTTCTTGTTGTAACTGAGACTTTGGGAAGAAGTAATTCTCGTAAGCAGGAACGACGTAGAAGTAATCGCAATTCCAAAGACACTGCAGTGAATTCAGATAATCCAGATAGTACCGATGATGATGAAGAGGACCGATTGCACATTGTTGAAGACTCGTTAAGTAATGAGGAAGAAGAATTATCTAATGTTGAAGCACCACCACCAGAGTTGCAAAAGTTATTGTCGGACAGTGAGAAAGAAAATCTGAATGACTTAATGATGGAAGGAGATCTTCTTGAAGTGTCCTTAGATGAGTCACTGGAATTATGGCGTATTTTATCAGCTATTCAACCAATTTCTGCTGCAGAAGCAGCCGCACTGCAAAAGCAAcatcaaatacaaaaacaaactgttCAAACGACTTCAAACGTTAACTCAGCTGCTGAAGATTCAAACGACAGTTTATTAGTTCAGAGTAGCCCTAACAGTAATAGTGGCAGCCTTAGTGGTCGGAACCCCACTATTGCTAATAAAAAACGTCGTTCATTAGAACCACTTAATAACAGTTGTCCACTGCCGCGCAAAAAGACTGCAACTCCTAATAAACCTTACAGTTCTTCAGCTAAAAAGTCGACACGCAAATCGACAATTGATATTAATAGCAAAGCACCGCAAGCAGATGATCCTTCTGATAGTAGGCAATCAAATGGTGGAAGCGGGAGTATAAACTCGAACACGCTTTCTGGACAAAAGAAACGAAAGCGTGTTGGGGCCAATTCGAACAACGGCACTAATGCTACCGGTCAAAAAAAGCACTCTCAACGTATTCAAACAGAGCAGCAAGATGATGATGAAGAAGAGTGCCGCGCAGAAAACTGTCATAAACCAACTGGTCGTGAAGTTGATTGGGTACAATGTGATGGAGGTTGCAATGAATGGTTCCATATGTATTGCGTTGGTCTGAATCGAAGTCAAATTAAAGCCGATGATGATTACTTCTGCATACGTTGCTCCAGGATGATGGCTATGTCGGCAGTCGTGGCAAGTGGGGCTAATAGTAGTAAACATTCTGTAATTGTGTccagtgcaacaacaaccgcaaTGTCCGTAATTACTACAAGCGCCATTAATAATAATGCGTTAGGTACAGGAACATCTATATCACAACAACCAACATCGACAACCAGCGCTGTTGCCACGTCTAAAGGCAGAGCACAAGCTACCCGATAa
Protein Sequence
ERNMNSSDFTKNNAGNNNAAPTLAIGAGLGDEKQTSNSCTGTNSNTGSGKKYHNSCPHPTNDRGRGKPLTHLQPHSSSTFNLNKTEEFHFDTPVECPVFRPTQEEFKNPLAYISKIRPIAEKCGIAKILPPESWSPPFAVDVDKLKFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGIEQTTKERKWAKVANRMSYPSSKSVGATLKAHYERILHPFEVYTSGKVLGAGVGASTSVDAVKLEDGTDYKAHEIPTRQQITPPNENNARRSKRFANSSANCGLNNSASRNMVKIETKEDFKRDLLNCFNAAGSSSSACLVRGQTGGTSSANSIALKKAPDPQLVDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLSSIPKGEWLCPRCVVEEVSKPTEAFGFEQAEREYTLQQFGQMADQFKTDYFRKPVHLVPTNLVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGFWAEQFEETMKQAAPELFASQPDLLHQLVTIMNPNILMNNGVPVYRTDQNAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDSEKKLRKSLLEWGVTRAERKAFELVPDDERHCQECNTTCFLSAVSCECTKYTLDEMPLMLQKLKAKAQSFERWLSRCRDIMDANTPTSAPLTELQELCKEAEVKKFPSSLLIDRLNSAIVEAEKCVTVIQQLGINKVRTRSDNNQEAAQYKLTMEELELFVQEINNLCCIIEEGTSVRELLSLGKQFLERANSLLNRSIDSLEEPEIEQLISEGNSLRIELPQMNQLYMRLKQIKWYKRAQGVRNGSTKLTYSDIKSLLSSAAAEVDPTDPIIDKEMRKLQEIGAAIEAWEKQAARYFQCTTQQHELTDIEQFLKTAAEIEGQVPSYITLKDALRKAKEWLNSVEQLQTNDHFPYCHTLEAIVLNGKSIPIQLEELKRMQGHLNSAHEWKSNTARVFLKKQTFYTLLEVLMPRSESVIIDSDLKQPFEDGFVKEMNPAQIVDSFKKAEEKELRDMRELRRQNMSKNPLKDLYCVCKSPFQGVMFNCQLCRDWFHEGCVAPSLGVSNIISGNNLISRPKWLCLSCVRSKRPRLEIILPLLVSLQRLPIRLPEDEALRCLAERAMNWQDRARKVLTSPDVTATLEAIIAQQRKQKRKVLVVTETLGRSNSRKQERRRSNRNSKDTAVNSDNPDSTDDDEEDRLHIVEDSLSNEEEELSNVEAPPPELQKLLSDSEKENLNDLMMEGDLLEVSLDESLELWRILSAIQPISAAEAAALQKQHQIQKQTVQTTSNVNSAAEDSNDSLLVQSSPNSNSGSLSGRNPTIANKKRRSLEPLNNSCPLPRKKTATPNKPYSSSAKKSTRKSTIDINSKAPQADDPSDSRQSNGGSGSINSNTLSGQKKRKRVGANSNNGTNATGQKKHSQRIQTEQQDDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKADDDYFCIRCSRMMAMSAVVASGANSSKHSVIVSSATTTAMSVITTSAINNNALGTGTSISQQPTSTTSAVATSKGRAQATR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01045252;
90% Identity
iTF_01562548;
80% Identity
-