Basic Information

Gene Symbol
Kdm5
Assembly
GCA_001188975.4
Location
LGAM02011748.1:41087-53412[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.5e-26 8.5e-23 80.8 0.1 2 89 223 306 222 306 0.95

Sequence Information

Coding Sequence
ATGGCAACCAAAGTATCAGCAGCGGAGGGAACTTCTGTTTCGAGTGCACCCACATCGACAGCTGGTTTAAGCGGTAACATCACACCAGCTAGACGCTTACGTACTCGAACTTCGACTGGGGGCAATGTAAGTGGTGGAGATTCGGGTAAAAAGTCATCAAACAATTCTAACGGTAGCGAACGAAATATGAGTTGttcagattttaataaaaataatggagGAAGTAATAACACTGTTTCTACATCAGCTATAGGAGCTAGTTCAAGTGATGACAAGCAAAGCTCGAATAGCTGCAGTATTACGAATTCCACCCCTGGATCAgccaaaaaatatcataatagTTGTCCTCACCCAACAAATGACCGTGGTCGGGGTAAACCAGTAACACACTTACAACCTCATAGCTCGAGTACATTTAACTTGAATAAAACAGAAGAATTTCATTTTGATACACCCGTTGAGTGTCCCGTTTTTCGTCCTACGCACGAAGAATTCAAGAATCCACTAGCTTACATTAGTAAGATACGACCGATTGCGGAGAAATGTGGAATAGCTAAAATCTTACCACCAGAATCATGGTCACCACCATTTGCTGTAGATgtagataaattaaaatttacaccaCGCGTACAACGGCTCAACGAATTAGAAGCAAAAACTCGAGTGAAACTTAATTTCTTAGACCAAATTGCCAAATTTTGGGAACTACAGGGTTCTTCTTTAAAAATACCAATGGTTGAACGTAAAGCATTAGATTTATATACCTTACATCGGATTGTCCAAGAAGAAGGAGGTATGGAGCAAACAACAAAAGAACGTAAATGGGCAAAAGTTGCAAATCGGATGTCGTATCCATCGAGCAAAAGCGTTGGAGCAACCTTAAAAGCCCATTACGAGCGAATACTTCATCCATTTGAGGTTTATACATCTGGTAAAGTGCTAGGAGCTGGGGCAGGACCCAGCACTAGCGCGGAAGGAGTGAAGCTTGAAGATGGTACGGATTATAAGACACACGAAATACCAACTCGCCAACAAATTACACCCCCAAACGAAAATAACGCTCGACGGTCTAAGCGCTTTGCCAATTCCAGCGCCAATTGTGGATTGAACAATTCGGTATCACATATTGttcatattgaaaaaaaagaggATTTTAAGCGTGATCTCCTTAATTGTTTTAATGCTGCTGGCACTTCGTCCTCTGCAAGTGGAGCTCGGGGTCAAGCTGGTAGTACATCTTCAGCAAATTCGATTGCTCTTAAGAAAGCACCCGATCCTCAAATGGTTGATcctttaatgaaatatatttgccaCATATGCAATCGTGGTGATGTGGAAGAATCAATGTTATTGTGTGACGGATGTGACGACAGCTATCATACATTTTGCTTGTTACCACCATTGTCCAGTATTCCTAAAGGTGAGTGGCTTTGCCCACGCTGTGTTGTAGAAGAAGTTAGTAAGCCTACTGAAGCTTTTGGCTTCGAGCAGGCAGAACGAGAGTATACATTGCAGCAATTTGGACAAATGGCCGACCAGTTTAAAACGGATTATTTTCGTAAGCCAGTTCATTTGGTCCCAACAAATTTAGTGGAGCGTGAATTTTGGCGCATTGTTTCATCGATTGACGAAGATGTAACAGTCGAATATGGAGCTGATTTGCATACCATGGATCATGGTTCGGGGTTTCCAACAAAAAGCTCTTTATATTTGCTTCCAGGGGATCAGGAGTACGCTGAATCTAGTTGGAATTTAAATAACTTACCATTACTGGAAGACTCAATTTTGGGCCATATTAATGCTGATATCAGTGGAATGAATGCACCCTGGATGTATGTAGGAATGTGTTTTGCCGCTTTTTGCTGGCATAACGAAGACCACTGGAGTTACTCCATTAACTATTTGCATTGGGGAGAACCAAAAACTTGGTACGGCGTACCGGGCTTTTGGGCTGAGCAATTTGAGGAAACAATGAAGCAGGCAGCTCCGGAACTTTTTGCATCGCAGCCAGATTTATTGCATCAGTTGGTGACTATAATGAATCCGAACATTTTAATGAATAATGGAGTGCCTGTTTATCGAACTGATCAGAATGCTGGAGAATTTGTTATAACATTTCCCCGTGCGTATCATGCTGGATTTAATCAAGGCTACAACTTTGCTGAAGCTGTGAATTTCGCTCCTGCTGATTGGTTGAAGATGGGTCGGGAGTGTGTTAATCACTATTCAATGTTGCGTCGTTTTTGCGTTTTTTCTCACGATGAGCTAGTATGCAAAATGGCACTAGAACCAGCCAAACTGACATTTGGCATTGCAACAGCTTGCTATATCGACATGGCAGAAATGGTAGACTCCGAAAAGAAACTTCGAAAATCTTTGTTGGAATGGGGTGTTACTCGCGCTGAGCGAAAAGCATTCGAACTTGTTCCAGACGACGAGCGACATTGTCAAGAATGCAATACTACGTGTTTTTTGTCTGCCGTATCATGTGAATGCACCAAGTCAATCGTTTGTCTTCGCCATTACACAGTTCTGTGTGATTGCCTCCCAGAAAAACACACTCTTCTTTACAGATATACACTTGACGAAATGCCATTAATGCTTCAAAAGCTTAAAGCCAAAGCACAAAGTTTTGAACGGTGGTTATCACGATGTCGCGACATTATGGATGCTAATACACCCACTTCAGCACCGTTAGCTGAATTACAGGAATTGTGCAAGGaagctgaaattaaaaaatttccttCATCGTTACTAATAGATCGCCTGAATTCAGCTATAGTCGAAGCCGAAAAATGTGTAACTGTCATTCAACAACTCGGAATAAACAAGGTTCGTACACGCTCCGACAATAACCAGGAAGCAGCACAATACAAACTTACAATGGAGGAATTAGAACTGTTTGTGCAAGAAATAAACAATTTGTGTTGTATTATTGAGGAAGGTACTTCTGTAAGAGAGCTTCTTTCTCttggtaaacaatttttggaacGTGCAAATGCATTATTAAATCGATCAATTGACTTGTTGGAAGAACCTGAAATGGATCAATTAATAAGTGAGGGGAACTCACTTCGAATAGAACTGCCGCAGATGAATCAATTGTACATCCgtcttaaacaaataaaatggtATAATCGTTCACAAGGTTTGCGAAACGGCAATACTAAATTGACATATAGTGATATAAAGAACTTGCTGAGTAGCGCAGCAGCTGAAGTGGACCCAACAGATCCAATAATAGATATGGAAATGAGAAAATTGCAGGAAATCGGCGCTGCAATAGAAGCTTGGGAAAAGCAGGCGGCGCGATATTTTCGATGTACAACACAACAACATGAGTTAGCTGATATTGAGCAGTTTTTAAAAACAGCTGCTGAGTTAGAAGGTCAGGTGCCGTCGTATGTAACCTTAAAAGATGCATTGCGAAAAGCTAAAGAGTGGTTGCATTCGGTAGAACAGTTACAGACCAACGACCATTTCCCCTATTGTCATACTCTTGAAGCAATAGTTCAAAGGGGTAAAAGCATTCCCATACAACTTGAAGAATTAAAACGCATGCAGGGCCATTTGAATAGTGCTCATGAGTGGAAAGACAATACTGCTCgcgtttttttgaaaaagcaaacattttatacattaCTCGAAGTGTTGATGCCCCGTTCCGAGTCTGTCATAATTGACTCAGATTTAAAACAGCCGTTTGAAGATGAGTTTGTAAAGGAAATGAATCCTGCTCAAATAGTAGATTCTTTTAAGAAGGCTGAAGAAAAAGAGTTGCGTGATATGCGCGAATTTAGGCGACAAAATATGTCGAAAAATCCATTAAAAGACCTATATTGCCTGTGTAAATCTCCGTTTCAAGGGGTTATGTTTAATTGTCAGCTCTGTCGTGATTGGTTCCATGAGGATTGTGTGCCGCCCCCACTGGGAATATCAAATATAACTTcgggaaataatattatatcacgTCCTAAGTGGCTTTGTCCGTCATGTGTTCGATCAAAGCGCCCCCGGCTCGAAATTATTCTACCGCTTCTGGTGTCATTGCAACGTTTGCCTATACGTTTACCGGAAGATGAGGCGTTGCGTTGTTTAGCGGAACGCGCTATGAATTGGCAAGATCGTGCCCGTAAGGTGTTGTCCAGTCCAGATGTAACCGCCGCACTTGAAGCAATTATTGCGCAACAACGTAAACAAAAACGAAAGGGTGTTGGTATAGCTGGGGCTTTAGGAAGAAGTAATTCTCGTAAGCAGCATCGTCGTAGAAGTAATCGTAATTCCAAAGACAATGCGCTGAATTCAGACAATCCAGATAGCACCGATGATGATGACGAGGAGGATCGATTACACATTGTTGAAGACTCGTTAAGTAATGAGGAAGAAGAATTATGTAATGTTGAAGCAGCACCGCCTCCTGAGTTGCAAAAGTTATTGTCCAATAGTGAGAAAGAAAATCTGAATGACTTAATGATGGAAGGAGATCTTCTTGAAGTGTCCTTAGATGAGTCATTAGAATTATGGCGTATATTATCAGCTATTCAACCAATTTGTGCTGCAGAAGCAGCCGCACTGCAAAAGcatcaaatacaaaaacaatctGTTCAAACGACTTCAAACGTTAACTCAGCCGCTGAAGATTCAAACGACAGTTTATTAGTTCAGAGTAGCCCTAACAGCAATAGTGGTAGTATTAGTGGTCGGAACCCCACCGGTGCTAATAAAAAGCGTCGCTCAGTAGAACCACTTAATAGCAGCTGTCCACTGCCGCGTAAAAAGACTGCCACTCCCAATAAACCTTACAGTTCTTCGGCTAAAAAGTCGACACGCAAATCGACAATTGATGCTAATAGTAAAGCGCTACAAGTAGATGATCCTCCTGATAATAAGCAATCAAATGGTGGAAGCGGGAGTACAAACCCGAACACGCTTTCGGCACAAAAGAAACGAAAGCGTGTTGGAGCCAATTCAAACAACAGCACTAATTTTACCGGTCAAAAAAAGCACTCTCAACGTAGTCAAACAGAACAACAAGAAGATGATGAAGAAGAGTGCCGCGCAGAAAACTGTCATAAACCAACTGGCCGTGAAGTTGATTGGGTACAATGTGATGGCGGTTGCAATGAATGGTTCCATATGTACTGCGTTGGTCTGAATAGAAGTCAAATTAAAGCCGATGATGATTACTTCTGCATACGTTGCTCCAGGACGATGGCTATGTCGACAATCGTGGCAAGTGGCGCTAATAGTAGTAATCATTCTGTAATTGAGTCcagtgcaacaacaactgcaatgtCCATAATTAGTGCAAACAGCATTAATAGTAATGCGTTAAGTACAGGGACAGCTGCACCACAACCACAAACATCGACAAACAGCGCTGTTGCATCATCTAAGGGCAGAGCACAAGCTACGCGATAA
Protein Sequence
MATKVSAAEGTSVSSAPTSTAGLSGNITPARRLRTRTSTGGNVSGGDSGKKSSNNSNGSERNMSCSDFNKNNGGSNNTVSTSAIGASSSDDKQSSNSCSITNSTPGSAKKYHNSCPHPTNDRGRGKPVTHLQPHSSSTFNLNKTEEFHFDTPVECPVFRPTHEEFKNPLAYISKIRPIAEKCGIAKILPPESWSPPFAVDVDKLKFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKERKWAKVANRMSYPSSKSVGATLKAHYERILHPFEVYTSGKVLGAGAGPSTSAEGVKLEDGTDYKTHEIPTRQQITPPNENNARRSKRFANSSANCGLNNSVSHIVHIEKKEDFKRDLLNCFNAAGTSSSASGARGQAGSTSSANSIALKKAPDPQMVDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLSSIPKGEWLCPRCVVEEVSKPTEAFGFEQAEREYTLQQFGQMADQFKTDYFRKPVHLVPTNLVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGFWAEQFEETMKQAAPELFASQPDLLHQLVTIMNPNILMNNGVPVYRTDQNAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDSEKKLRKSLLEWGVTRAERKAFELVPDDERHCQECNTTCFLSAVSCECTKSIVCLRHYTVLCDCLPEKHTLLYRYTLDEMPLMLQKLKAKAQSFERWLSRCRDIMDANTPTSAPLAELQELCKEAEIKKFPSSLLIDRLNSAIVEAEKCVTVIQQLGINKVRTRSDNNQEAAQYKLTMEELELFVQEINNLCCIIEEGTSVRELLSLGKQFLERANALLNRSIDLLEEPEMDQLISEGNSLRIELPQMNQLYIRLKQIKWYNRSQGLRNGNTKLTYSDIKNLLSSAAAEVDPTDPIIDMEMRKLQEIGAAIEAWEKQAARYFRCTTQQHELADIEQFLKTAAELEGQVPSYVTLKDALRKAKEWLHSVEQLQTNDHFPYCHTLEAIVQRGKSIPIQLEELKRMQGHLNSAHEWKDNTARVFLKKQTFYTLLEVLMPRSESVIIDSDLKQPFEDEFVKEMNPAQIVDSFKKAEEKELRDMREFRRQNMSKNPLKDLYCLCKSPFQGVMFNCQLCRDWFHEDCVPPPLGISNITSGNNIISRPKWLCPSCVRSKRPRLEIILPLLVSLQRLPIRLPEDEALRCLAERAMNWQDRARKVLSSPDVTAALEAIIAQQRKQKRKGVGIAGALGRSNSRKQHRRRSNRNSKDNALNSDNPDSTDDDDEEDRLHIVEDSLSNEEEELCNVEAAPPPELQKLLSNSEKENLNDLMMEGDLLEVSLDESLELWRILSAIQPICAAEAAALQKHQIQKQSVQTTSNVNSAAEDSNDSLLVQSSPNSNSGSISGRNPTGANKKRRSVEPLNSSCPLPRKKTATPNKPYSSSAKKSTRKSTIDANSKALQVDDPPDNKQSNGGSGSTNPNTLSAQKKRKRVGANSNNSTNFTGQKKHSQRSQTEQQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKADDDYFCIRCSRTMAMSTIVASGANSSNHSVIESSATTTAMSIISANSINSNALSTGTAAPQPQTSTNSAVASSKGRAQATR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01045252;
90% Identity
iTF_01562548;
80% Identity
-