Nrib021110.1
Basic Information
- Insect
- Nasonovia ribisnigri
- Gene Symbol
- CDC5L
- Assembly
- GCA_027563275.1
- Location
- JANEHQ010000850.1:39720-46741[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-16 2.1e-13 51.0 1.5 2 46 9 54 8 54 0.97 2 2 8.5e-12 7.2e-09 36.5 0.1 1 45 60 103 60 104 0.93
Sequence Information
- Coding Sequence
- atgccgcgaatcatgataaaaggcggcgtctggcgaaacaccgaggatgaaattcttaaagcagctgttatgaaatatggcaaaaatcaatggtcacgtattgcatcattattacatcgtaaatcagctaaacaatgtaaggcacgttggtttgaatggcttgatccaagtattaaaaaaactgaatggagtcgagaggaagatgaaaagcttttacatcttgctaaactcatgcctacacaatggcgtaccattgctcccatcgttggtcgcacagcttcacagtgtttggaaagatatgaatatttattagatcaagcccaaaggaaagaagatggcgaggaagtgggagatgatccaagaaaattaaaacctggagaaattgatccaaatcctgaaacaaaaccagcccgtcccgatcctaaagatatggatgaagatgagttggaaatgttatctgaagcaagagctcgtttagctaatacacagggaaaaaaggcaaaacgtaaagctcgtgagaagcaattagaagaagctagaagacttgctgcattacaaaaacgaagggaattgcgtgctgctggtattggtgttggaagaggcaataaacgaaagcgcggtattgattataatgctgaaataccatttgagaaaaaaccagctttagggttttatgatactgccaatgaggatgttgatccacttgcaccagattttagaaaattgaggcaacaaaatttagatggagaACTACGTTCTGAAATTGAAGAGAGAgaaagaaagaaagacaaagctaagctcaagcagcgtaaggaaaatgaagttcctttagctatgttaaacaatcaagaacctattaggaaaatgagtaaacttgttctaccagaaccacaaatatcagatcaaGAATTGCAACAAGTCGTTAAATTGGGACGAGCCAGTGAAATGGCACGAGAAATAGCAATGGAAAATGGCCCTCAACAAGCTTCAGATGCATTATTGTCAGATTATACCCCTTCAATTAATAATATTCCTGGCCGCACTCCAAGAACCCCATCTGTTTCTACTGACAAAGTTTTACAAgacgctcaaaatattatggctctgacccatgtagatactcctctcaaaggaggtctcaatacagaattgcaaaatgttgatttcaatggtgtcaccccacaacgacaattgattacaacacctaatacaattttaggtactccACTTTCACAAGCTGCTAGTGATGGTTTTCAAACTCCGCAAAGTGATAGATCATTAGTAAAAGCTGGTATGCTAACACCCACTCCTTTAAGGGATCAGTTAAGCATCAATCGTTCAGATTCTATGGAAGTCGATATTTTAAATACACCCCAAGCCATGAAAAACTACCAACATcaagtaaaagaacagttgaaagcgggcttaagtacattgccaaatccaaaaaatgattttgaaatagttgtgcctgaagaccaccccgaagacgaagaaactgttgttcaaaaagattttgtagaagatcagtctgatgttgagatgCGTAGTGCTGAAGAACTTCTTGCTCGCCGGCAATTAGAAATGAAGTTACGATCACAAgctgaagaattgattaaacaagaaatgattacaatgcttcattatgatgctgttcgtagccctctaccaccagaaGTTGCTACACTTACTCAAAGTGGTCCCAAAAAACAGCCAATCCTAACTGAAACTCAGCATTTGGCTTATTTACAAGCACACCCGTACCAACAATTTACTGAAGAAGAAATGGAAAATGCAAAACAAGTTTTGATAAAAgaaatggaagttgttaaacaaggtatgaatcatggtgaattatcattagactcgttcactcaagtgtggggtgaatgtttgggccaagtattatttctgcctaatcaaaatcgttatacaagagcaaatttagctagtaaaaaagatagaattgaatcccttgaaaaaaaactggaacagaatagaggtcatatgactaaagaagctaaaaaagctggaaaaatggaaaaaaaaattaaaattattctcgggggatatcaaactcgttctcaaggtcttatcaagcaattcataaccagtgtggatgagattgaacaaggacatttagaattatcaactttccagtttttgcaacgacaggaagaatctgcTATACCAAAACGACTACAGTCATTAACTGATGATGTAGACCGTCAAAAGGAAAGAGAGAAAATTCTACAACAAAAATTCTTGGACCTTGAAACACGATGGAAAGAATTACAAATTGGAAATGATTGA
- Protein Sequence
- MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIVGRTASQCLERYEYLLDQAQRKEDGEEVGDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIGVGRGNKRKRGIDYNAEIPFEKKPALGFYDTANEDVDPLAPDFRKLRQQNLDGELRSEIEERERKKDKAKLKQRKENEVPLAMLNNQEPIRKMSKLVLPEPQISDQELQQVVKLGRASEMAREIAMENGPQQASDALLSDYTPSINNIPGRTPRTPSVSTDKVLQDAQNIMALTHVDTPLKGGLNTELQNVDFNGVTPQRQLITTPNTILGTPLSQAASDGFQTPQSDRSLVKAGMLTPTPLRDQLSINRSDSMEVDILNTPQAMKNYQHQVKEQLKAGLSTLPNPKNDFEIVVPEDHPEDEETVVQKDFVEDQSDVEMRSAEELLARRQLEMKLRSQAEELIKQEMITMLHYDAVRSPLPPEVATLTQSGPKKQPILTETQHLAYLQAHPYQQFTEEEMENAKQVLIKEMEVVKQGMNHGELSLDSFTQVWGECLGQVLFLPNQNRYTRANLASKKDRIESLEKKLEQNRGHMTKEAKKAGKMEKKIKIILGGYQTRSQGLIKQFITSVDEIEQGHLELSTFQFLQRQEESAIPKRLQSLTDDVDRQKEREKILQQKFLDLETRWKELQIGND
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00308764; iTF_00468867; iTF_00136065; iTF_00418211; iTF_00811908; iTF_00018952; iTF_01305482; iTF_01304107; iTF_00463276; iTF_01169772; iTF_01433037; iTF_00340495; iTF_00972976; iTF_01167536; iTF_00135249; iTF_01304785; iTF_01032818; iTF_01328562; iTF_01346386; iTF_01347026; iTF_01499570; iTF_01330484; iTF_00134200; iTF_00940408; iTF_01350205; iTF_01031902;
- 90% Identity
- iTF_00468867; iTF_00136065; iTF_00418211; iTF_00811908; iTF_00018952; iTF_01305482; iTF_01304107; iTF_00463276; iTF_01169772; iTF_01433037; iTF_00340495; iTF_00972976; iTF_01167536; iTF_00135249; iTF_01304785; iTF_01032818; iTF_01328562; iTF_01346386; iTF_01347026; iTF_01499570; iTF_01330484; iTF_00134200; iTF_00940408; iTF_01350205; iTF_01031902; iTF_00308764;
- 80% Identity
- -