Ttri019814.1
Basic Information
- Insect
- Therioaphis trifolii
- Gene Symbol
- CDC5L
- Assembly
- GCA_027580255.1
- Location
- CM050409.1:34241509-34250872[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2e-16 3.1e-13 50.9 1.5 2 46 9 54 8 54 0.97 2 3 6.8e-12 1e-08 36.4 0.1 1 45 60 103 60 104 0.93 3 3 6.2 9.5e+03 -1.9 0.5 3 18 620 635 619 636 0.85
Sequence Information
- Coding Sequence
- atgccgcggattatgatcaaaggcggtgtttggcgaaacactgaggatgagattcttaaagcagctgttatgaaatatggtaaaaaccaatggtcacgtattgcatcattattacatcgtaaatcagctaaacaatgtaaagcacgttggtttgaatggcttgatccaagtattaaaaaaactgaatggagtcgagaagaagatgaaaaacttttacatcttgctaaacttatgccaactcaatggcgtactattgcacccattgttgggcgtacagcttcacagtgtttagaaagatatgaatatttattagatcaagctcaaagaaaagaagatggcgaagaagttggtgatgatcctagaaaattaaaaccaggcgaaattgatcctaatcctgaaacaaaaccagcccgcccagatcctaaagatatggacgaagatgagttggaaatgttatctgaagcaagagctcgtttagctaacactcaaggaaaaaaagccaaacgaaaggctcgtgagaaacaattggaagaagctaggagacttgcagcattacaaaaacgaagggaattgcgtgctgccggaattggtgttggaagaggcaataaacgaaaacgtggaatagattacaatgctgaaataccatttgaaaagaaaccagctttaggtttttatgatactgctaatgaagaagttgatccactggcacctgattttaggaaattaaggcagcaaaatttagatggagaATTGCGTGTTGAAATTGAAGAGAGAgaaagaaagaaagacaaagcaaaacttaaacaacgtaaagaaaatgaagttccattagctatgttaaataatcaagaacctataagaaaaatgagtaaacttgttttaccagaaccacaaatttctgatcaaGAACTGCAACAAGTTGTTAAGTTAGGACGGGCTAGTGAAATGGCACGTGAAATAGCTATGGAAAATGGTCATCAACAAGCTTCAGATGCATTATTGTCAGATTACACACCTTCTATTAACAATATACCGGGCCGTACTCCAAGAACCCCATCAGTATCTACTGACAAAGTTTTACAGgatgcccaaaatatcatggcactaacacatgtagatactcctttaaaaggaggtcttaatacagaattgcaaaatgttgatttcaatggagttacccctcagcggcaaataattacaactcctaatactattttaggtacttcACTCACTCAAAATTCCAATGATGGTTTCCAAACCCCACAAAGTGATAGATCAATAGTTAAAGCTGGTATGGTAACTCCTACTCCTCTAAGAGACCAGTTGAGCATCAATCGTTCTGATTCTATGGAAGTAGATATAATAAATACTCCACAAGCTATGAAAAACTATCATCATcaagtaaaagaacagttaaaagcaggattaagtactttgcctcggccaaaaaatgattttgaaattgtagttcctgaagatcaagttgaagatgaagaaacagaaactcaaaaagattttatagaagatcaatctgatgtagaAATGCGTAGTGCTGAAGAACTTCTTGCGCGTCGCCAGTTAGAAATGAAGTTACGATCTCAAGTAATTCAACGTTGTTTACCACGTCCACCAGATACAAATATTGTTTTGAGACCTTTAAATTCAGAGCCACCTCTTACAGACCTTCAAAAGgctgaagagttgataaaacaagaaatgattacgatgcttcattatgatgctgttcgcaaccctCTTCCTCCAGAAGTTGCTACTCTTACTCAAAGTGGTCCCAAAAAACAACCTATCTTAACTGAAAGTCAGCATTTAGCTTATTTACAGGCACATCCGTATCAACAATTTACAGAAGAAGAGTTGGAAAATGCAAAACAACTGTTAAAAAAAgaaatggaaatagttaaacaaggcatgaatcatggagatttgtcattagattcgtttacacaagtgtggggtgagtgtttgggccaagtattattcttgccgaatcaaaatcgatatactagagcaaatttagcgagtaaaaaggatagaatagagtcacttgagaaaaaactggagcaaaacagaggtcatatgactaaagaagccaaaaaagctggtaaaatggaaaaaaaaatcaaaatcattcttggaggttatcaaactcgctctcaaggtcttatcaaacaattccaaacccttgttgatgaaattgagcaggcacatttggagttgtccacatttcagtttctgcagcgacaagaagaagctgctataccgaaaagaTTACAATCATTAACTGATGATGTAGACCGTCAAAAAGAGAGAGAGAAAATTTTACAACAAAAATACTTGGACCTTGAAACACGATGGAAAGAATTACAAATAGGAAATGATTAA
- Protein Sequence
- MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIVGRTASQCLERYEYLLDQAQRKEDGEEVGDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIGVGRGNKRKRGIDYNAEIPFEKKPALGFYDTANEEVDPLAPDFRKLRQQNLDGELRVEIEERERKKDKAKLKQRKENEVPLAMLNNQEPIRKMSKLVLPEPQISDQELQQVVKLGRASEMAREIAMENGHQQASDALLSDYTPSINNIPGRTPRTPSVSTDKVLQDAQNIMALTHVDTPLKGGLNTELQNVDFNGVTPQRQIITTPNTILGTSLTQNSNDGFQTPQSDRSIVKAGMVTPTPLRDQLSINRSDSMEVDIINTPQAMKNYHHQVKEQLKAGLSTLPRPKNDFEIVVPEDQVEDEETETQKDFIEDQSDVEMRSAEELLARRQLEMKLRSQVIQRCLPRPPDTNIVLRPLNSEPPLTDLQKAEELIKQEMITMLHYDAVRNPLPPEVATLTQSGPKKQPILTESQHLAYLQAHPYQQFTEEELENAKQLLKKEMEIVKQGMNHGDLSLDSFTQVWGECLGQVLFLPNQNRYTRANLASKKDRIESLEKKLEQNRGHMTKEAKKAGKMEKKIKIILGGYQTRSQGLIKQFQTLVDEIEQAHLELSTFQFLQRQEEAAIPKRLQSLTDDVDRQKEREKILQQKYLDLETRWKELQIGND
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01037702;
- 90% Identity
- iTF_01037702;
- 80% Identity
- -