Dnox004954.1
Basic Information
- Insect
- Diuraphis noxia
- Gene Symbol
- CDC5L
- Assembly
- GCA_001186385.1
- Location
- NW:290281-296760[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-16 2.2e-13 49.6 1.7 2 45 9 53 8 54 0.96 2 2 3.9e-12 2.8e-09 36.4 0.1 1 45 60 103 60 104 0.93
Sequence Information
- Coding Sequence
- ATGCCGCGAATCATGATAAAAGGCGGCGTTTGGCGAAATACCGAGgaTGAGATTCTTAAAGCAGCTGTTATGAAATATGGCAAAAATCAATGGTCACGTATTGCATCATTATTACACCGTAAATCAGCTAAACAATGTAAGGCACGTTGGTTTGAATGGVTTGATCCAAGTATTAAAAAAACTGAATGGAGTCGAGAAGAAGATGAAAAGCTTTTACATCTTGCTAAACTCATGCCAACACAATGGCGTACGATTGCTCCAATCGTTGGTCGCACAGCTTCACAGTGTTTGGAaagatatgaatatttattGGATCAAGCCCAAAGGAAAGAAGATGGTGAAGAAGTAGGAGATGATCCTAGAAAATTGAAACCAGGTGAAATTGATCCAAATCCTGAAACAAAACCAGCTCGTCCCGATCCTAAAGAYATGGATGAAGATGAGTTGGAAATGCTTTCTGAAGCAAGAGCTCGTTTAGCTAACACACAGGGTAAGAAGGCAAAACGTAAAGCTCGTGAGAAGCAATTAGAAGAAGCTAGAAGACTTGCTGCATtacaaaaaCGGAGAGAATTGCGTGCTGCTGGTATAGGTGTTGGAAGAGGAAACAAGCGAAAGCGTGGTATAGACTACAACGCTGAAATACCATTTGAGAAAAAGCCAGCTTTAGGGTTTTATGATACTGCCAATGAGGAAGTTGATCCACTTGCACCAGATTTYAGAAAATTGAGGCAACAAAATTTAGATGGAGAACTACGTGTAGAAATTGAAgagAGAGAACGAAAGAAAGACAAAGCTAAGCTCAAGCAGCGTAAAGAAAATGAAGTTCCTTTAGCTatgttaaataatcaagaaCCTATTAGGAAAATGAGTAAACTTGTTTTACCTGAACCACAAATATCTGatcaagaatTACAACAAGTTGTTAAATTGGGACGAGCTAGTGAAATGGCACGAGAAATAGCAATGGAAAATGGTCCTCAACAAGCTTCWGATGCATTATTGTCAGATTATACAccttcaattaataatattcctgGCCGCACTCCAAGAACCCCATCTGTTTCAACTGACAAAGTTTTACAAGATGCTCAAAATATAATGGCTCTAACACATGTAGATACTCCTCTCAAAGGAGGTCTTAATACAGAATTGcaaaatgttgattttaatgGTGTCACTCCACAACGACAATTGATTACTACGCCCAATACAATTTTAGGTACTCCGCTTTCACAAGCTGCTAATGATGGTTTCCAAACTCCGCAAAGTGATAGATCACTAGTAAAATCTGGTATGCTAACACCYACTCCTTTAAGRGATCAGTTAAGCATCAATCGTTCAGATTCCATGGAAGtcgatattataaatacacccCAAGCTATGAAAAACTACCAMCATCAAGTAAAAGAACAGTTGAAAGCGGGCTTAAGCACATTGCCAAATcccaaaaatgattttgaaataGTTGTACCTGAAGACCATCCTGAAGATGAAGAAACTGTTGTTCAAAAAGATTTTGTAGAAGATCAGTCTGATGTAGAGATGCGTAGTGCTGAAGAACTTCTTGCTCGTCGACAATTAGAAATGAAGTTACGATCYCAAGTAATCCAACGAGGTTTACCTCGTCCACCAGATACCAATATTGTGCTGAGACCTTTGAATTCAGAGCCACCCCTTACAGATCTTCAAAAGgctgAAGAATTGATTAAACAAGAAATGATTACAATGCTTCATTATGATGCTGTCCTTAGCCCTCTACCACCGGAAGTTGCTACACTGACTCAAAGTGGTCCCAAAAAACAACCAATCCTAACTGAAGCTCAACATTTGGCTTATTTACAGGCACACCCATACCAACAATTTACTgaagaagaaattaaaaatgcaAAACAAGTTTTGTTAAAAGAAATGGAAATTGTTAAACAAGGTATGAATCATGGTGAATTGTCATTAGATTCATTCACTCAAGTGTGGGGCGAGTGCTTGGGTCAAGTATTATTTCTGCCTAATCAAAATCGTTATACAAGAGCCAATTTAGCTAGTAAAAAGGATAGGATTGAATCGTTAGAAAAAAAACTGGAACAGAATAGAGGTCATATGACTAAAGAAGCTAAAAAAGCTGGAAAAAtggaaaagaaaattaaaattattcttgggGGATATCAAACGCGTTCTCAAGGTCTTATCAAACAATTCATAACTAGTGTGGATGAGATTGAACAAGGACATTTAGAATTATCAACTTTCCAGTTTTTGCAACGACAGGAAGAATCTGCTATACCAAAGCGACTACAGtctTTAACTGATGATGTAGAGCGTCAAAAAGAACGAGAGAAAATTCTACAACAAAAATTCTTGGATCTCGAAACACGGTGGAAAGAATTACAAATTGGAAATGATTGA
- Protein Sequence
- MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWXDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIVGRTASQCLERYEYLLDQAQRKEDGEEVGDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIGVGRGNKRKRGIDYNAEIPFEKKPALGFYDTANEEVDPLAPDFRKLRQQNLDGELRVEIEERERKKDKAKLKQRKENEVPLAMLNNQEPIRKMSKLVLPEPQISDQELQQVVKLGRASEMAREIAMENGPQQASDALLSDYTPSINNIPGRTPRTPSVSTDKVLQDAQNIMALTHVDTPLKGGLNTELQNVDFNGVTPQRQLITTPNTILGTPLSQAANDGFQTPQSDRSLVKSGMLTPTPLRDQLSINRSDSMEVDIINTPQAMKNYXHQVKEQLKAGLSTLPNPKNDFEIVVPEDHPEDEETVVQKDFVEDQSDVEMRSAEELLARRQLEMKLRSQVIQRGLPRPPDTNIVLRPLNSEPPLTDLQKAEELIKQEMITMLHYDAVLSPLPPEVATLTQSGPKKQPILTEAQHLAYLQAHPYQQFTEEEIKNAKQVLLKEMEIVKQGMNHGELSLDSFTQVWGECLGQVLFLPNQNRYTRANLASKKDRIESLEKKLEQNRGHMTKEAKKAGKMEKKIKIILGGYQTRSQGLIKQFITSVDEIEQGHLELSTFQFLQRQEESAIPKRLQSLTDDVERQKEREKILQQKFLDLETRWKELQIGND
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01037702;
- 90% Identity
- iTF_01037702;
- 80% Identity
- -