Msep016948.1
Basic Information
- Insect
- Mythimna separata
- Gene Symbol
- kn
- Assembly
- GCA_030763345.1
- Location
- CM061181.1:14917247-14926338[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-49 3.4e-45 155.5 0.0 218 295 2 86 1 86 0.98 2 2 4.5e-16 8.6e-12 45.2 0.1 387 467 84 166 83 175 0.69
Sequence Information
- Coding Sequence
- ATGGTGGACGGTCCCCTCCTAGCGATATCAGACAACATGTTTGTCCACAACAACTCGAAGCACGGAAGACGGGCGAAAAGGCTAGACCCTAGCGAAGGTCTATATCCTCCTCTGCCGGTAGCCACTCCATGCATCAAGGCGATATCACCGAGCGAAGGCTGGACGTCCGGAGGGTCGACGGTGATCATAGTAGGGGACAACTTCTTTGACGGACTACAAGTGGTGTTTGGTACCATGTTGGTTTGGAGTGAGGAAATAATCCTCAAAAGAGCGGCAGACTTGGCGGAAGCACTATACTCGATGCCTCGCAACAACCAGTTGGGTCTAGGCGCGCCACGGTCACCGCCTGCTAGCATGCCTTTCAACTCGTACACAGGACAACTCGCCGTCAGCGTGCAGGATACTGCGGCCTCGCAGTGGACTGAAGGAATGGGTGGCCTAGTATCATCACCATTCAGCGTCAACCCGTTCTCACTACCAACTTGCAGCGCTCAACAGTATGCTCAAACCGCTCCGCTCGCTTCCAAGTAG
- Protein Sequence
- MVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSEEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEGMGGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01247876;
- 90% Identity
- iTF_01247876; iTF_01279975; iTF_00164111; iTF_00851505; iTF_01170357; iTF_01182458; iTF_00274236;
- 80% Identity
- iTF_00274236;