Pdes019027.1
Basic Information
- Insect
- Pyrausta despicata
- Gene Symbol
- kn
- Assembly
- GCA_963921415.1
- Location
- OY992858.1:10731968-10741882[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.4e-48 1.2e-43 150.4 0.0 218 295 2 96 1 96 0.98 2 2 4.9e-16 9.4e-12 45.1 0.1 387 467 94 176 93 185 0.69
Sequence Information
- Coding Sequence
- ATGGTCGACGGCCCCCTCCTAGCGATATCGGACAACATGTTCGTGCACAACAACAGCAAGCACGGCCGGCGCGCCAAGCGGCTGGACCCGACTGAAGGTATTGACGCCGCGCCAGACCCTAactCGGGTCTGTACCCACCCCTGCCCGTGGCCACTCCATGCATCAAGGCGATATCACCCAGCGAAGGTTGGACGTCGGGCGGGTCCACCGTCATCATCGTCGGTGACAACTTCTTTGATGGACTGCAAGTCGTATTTGGGACCATGCTGGTTTGGAGCGAGgaaataatccttaaaagaGCAGCAGACCTGGCCGAAGCATTATACTCCATGCCTCGGAATAACCAGCTAGGGCTCAGCGCTCCTCGGTCGCCGCCAGCCAGCATGCCCTTCAACTCCTATACTGGGCAGCTAGCCGTCAGCGTTCAGGATACTGGCGCCTCGCAGTGGACTGAAGGAATGGGAGGGCTGGTATCATCACCATTCTCAGTCAATCCATTCTCGTTACCGACTTGCAGTGCGCAGCAGTACGCGCAGACTGCGCCGCTAGCGTCCAAGTAG
- Protein Sequence
- MVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIDAAPDPNSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSEEIILKRAADLAEALYSMPRNNQLGLSAPRSPPASMPFNSYTGQLAVSVQDTGASQWTEGMGGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01247876;
- 90% Identity
- iTF_01029943;
- 80% Identity
- -