Lwla023346.1
Basic Information
- Insect
- Lacanobia wlatinum
- Gene Symbol
- kn
- Assembly
- GCA_947578705.1
- Location
- OX388030.1:20669502-20678219[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-50 2.4e-46 158.9 0.1 218 295 2 78 1 78 0.98 2 2 3.9e-16 5.7e-12 45.4 0.1 387 467 76 158 75 167 0.69
Sequence Information
- Coding Sequence
- ATGGTGGACGGTCCTCTCCTAGCGATATCAGACAATATGTTCGTGCACAACAACAGCAAGCATGGCCGGCGCGCGAAACGGCTAGACCCTAGCGAAGCCACTCCATGCATCAAGGCGATATCGCCGAGTGAAGGCTGGACATCGGGGGGTTCGACAGTTATCATAGTCGGGGACAACTTCTTCGACGGACTACAAGTTGTGTTTGGAACCATGTTGGTTTGGAGTGAGGAAATAATCCTCAAAAGAGCGGCGGACTTGGCGGAGGCGCTCTACTCGATGCCCCGCAACAACCAGCTCGGTCTGGGTGCGCCACGATCACCACCAGCCAGTATGCCTTTCAACTCCTACACAGGACAGCTAGCCGTCAGCGTGCAAGATACTGCGGCCTCACAGTGGACTGAAGGAATGGGCGGCCTAGTATCATCGCCATTCAGCGTCAACCCGTTCTCACTACCAACTTGCAGCGCTCAACAGTATGCTCAGACCGCTCCGCTTGCTTCCAAGTAG
- Protein Sequence
- MVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSEEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEGMGGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01247876;
- 90% Identity
- iTF_01029943;
- 80% Identity
- iTF_00274236;