Ckad007182.1
Basic Information
- Insect
- Caradrina kadenii
- Gene Symbol
- kn
- Assembly
- GCA_947462355.1
- Location
- OX381682.1:9987122-9991448[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-29 1.3e-25 89.8 0.8 248 295 13 60 6 60 0.93 2 2 4.1e-16 3.8e-12 45.3 0.1 388 467 59 140 58 149 0.69
Sequence Information
- Coding Sequence
- ATGAAGTTTCTGATAGCAGGTCTATATCCTCCACTACCAGTAGCCACACCATGCATCAAGGCGATATCACCTAGCGAAGGTTGGACGTCCGGAGGGTCAACAGTTATCATAGTAGGGGACAATTTCTTCGACGGACTTCAAGTTGTGTTTGGGACCATGTTGGTTTGGAGCGAGGAAATAATATTAAAACGAGCGGCGGACTTGGCGGAAGCACTCTACTCGATGCCTCGCAACAACCAATTAGGTCTGGGTGCGCCGCGGTCACCACCTGCCAGCATGCCTTTCAACTCGTATACAGGGCAACTGGCTGTCAGCGTGCAGGATACTGCGGCATCGCAGTGGACTGAAGGAATGGGCGGTTTAGTATCTTCACCGTTCAGTGTAAACCCGTTCTCGTTACCAACATGCAGCGCTCAACAGTACGCTCAGACAGCTCCGCTTGCTTCCAAGTAG
- Protein Sequence
- MKFLIAGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSEEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEGMGGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01247876;
- 90% Identity
- iTF_01029943;
- 80% Identity
- iTF_00851505; iTF_01029943;