Basic Information

Insect: Mythimna loreyi
Gene Symbol: Znf296
Assembly: GCA_029852875.1
Location: CM056777.1:13623194-13640012[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.28 25 6.5 2.1 1 21 161 181 161 182 0.95

2 12 0.00048 0.042 15.1 0.6 2 20 195 213 194 217 0.95

3 12 0.006 0.52 11.7 0.5 2 23 257 278 256 278 0.96

4 12 0.011 0.94 10.9 0.3 1 20 382 401 382 403 0.92

5 12 5.9e-05 0.0052 18.0 0.8 1 23 411 434 411 434 0.98

6 12 0.00015 0.013 16.8 4.7 1 23 455 477 455 477 0.98

7 12 2.5e-06 0.00022 22.3 3.6 1 23 484 506 484 506 0.99

8 12 1.4e-07 1.2e-05 26.3 2.3 3 23 520 540 518 540 0.96

9 12 3.1e-05 0.0027 18.9 3.2 1 23 546 568 546 568 0.99

10 12 1.7e-06 0.00015 22.9 2.5 2 23 575 596 574 596 0.96

11 12 1.6e-07 1.4e-05 26.1 1.4 1 23 602 624 602 624 0.99

12 12 0.0021 0.19 13.1 0.1 1 23 630 652 630 652 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.28	25	6.5	2.1	1	21	161	181	161	182	0.95
2	12	0.00048	0.042	15.1	0.6	2	20	195	213	194	217	0.95
3	12	0.006	0.52	11.7	0.5	2	23	257	278	256	278	0.96
4	12	0.011	0.94	10.9	0.3	1	20	382	401	382	403	0.92
5	12	5.9e-05	0.0052	18.0	0.8	1	23	411	434	411	434	0.98
6	12	0.00015	0.013	16.8	4.7	1	23	455	477	455	477	0.98
7	12	2.5e-06	0.00022	22.3	3.6	1	23	484	506	484	506	0.99
8	12	1.4e-07	1.2e-05	26.3	2.3	3	23	520	540	518	540	0.96
9	12	3.1e-05	0.0027	18.9	3.2	1	23	546	568	546	568	0.99
10	12	1.7e-06	0.00015	22.9	2.5	2	23	575	596	574	596	0.96
11	12	1.6e-07	1.4e-05	26.1	1.4	1	23	602	624	602	624	0.99
12	12	0.0021	0.19	13.1	0.1	1	23	630	652	630	652	0.97

Sequence Information

Coding Sequence: ATGGCCTCTCCTAATcaagaaactaaaataaaaatggaagaATTATGTAGAACGTGTTTGTCTAAAGATAATGAATTACACTCGTTATTTGACTCGTTATTTGGTTCTACAATCACGTTAGATTACATAGTAACTTCAACGACTGGGCTAAAGATAAGCCAAAATGATGGATTACCTTCAACAATTTGTTGCGAGTGTAAAGAAAAAGCATCAAACGCATTTGAATTCAAAAAAAAGTCGGAAGAAGCTAATATGTCCCTAAGgggtctattaaaaaaagaaaaggaaaatgCAATATCTATGAAACTTTTGAATCAAACTAATTCATCAGATGTGAAGACTGAAGACCTATCAGCtcatgataatgatgactataCTGACAATGAATTCAATGTTTCCCTAAGTAGTGGACCAGATTTACATGAACCGACACATGAAGGTGTTAAAACGGAGCATGAGAACTTAGATCGCAAGTCATGCTTTGTTTGCAAAAGCTGCTTAGTTGTTTTTGATACTCACTGTAAATTACAAGAACATCAGAAAATATGTATCAAAGTTGAGTGTGAAGAAACCAACCGAACTTACTGTCCACTTTGCGGTACATGCTACAATGGCGCCGAGAATTTAACGAAACATATGTGGGAAAACCATGCAGATCTAATGGGCCCAAAAAAGAGAGGCAGACCTAAGAAGATGTTGACTAGTACCATTCTTAACAAGTTATCAGAAAATGGATTTTGCATAACATCAATGCCAGCTAAAAAGATTGAGTGTGAATTTTGCAAGGAACATTTTGACACCAAAGAAGAATTAGGATCACATGCTATAACTCATAAAGATACGAAAGTGCTACGTTGCTTACAATGCAAGAAAATTTACCTCGATAGGGATCATTTTGATCACCATAGCTGTATTGACGAAAAAAATGGTATAagcaatttagaaaatgaCTCAGCTAAAATAGAGCCCAATGAGAAAGTACTACAGAATTATCCATCAGAAATTACATTACGAGAATGTCTAGACCCAAACATAGATATGGCGACCATCAACATGCTTACAGTGTGCAATGCTTGTAGTTGCGTATTGCAATCAGAAGCGGATCTCATTAACCATCGAGATGCGGAACATCCGGAGCTATCTCACCGGTGCAACCTCTGCACAAAGGTGTTTGCATCTTTGCGATCAGCGGCGCGCCATAGAAGTATTTGTAagcaaatagaaagaaaatataaatgtagCACGTGTGGACTGAAATTTGCGTATGAAATATCTctgaataaacatattttaagaTATCATGAGGGACAAAGCGTTTCAGTTAAATTTATTGACTCTAAAACAAAACGAGAAGAGAGACAGTTTCAATGTGATACTTGCAATAGATGTTTTTACAAgagGGACTTGCTCgttaaacatacaaaaatacacaTGCCAATAGAAAACTTTTATCAATGTGATATTTGTGAAAAGAAGTTTCACAGGAGTGACAATCTTCGGTCTCACAAACGAGTTCACCAGCCGCAACGTGAGAAGAATTCAACTAGTAATTGTTTATGCCTATACTGTGGCCGCAGTTTCTCTAACTCGTCGAATTTAATCGTACACATGAGGCGCCACACCGGAGAGAAGCCCTACAAATGTGATTTTTGTGGCAAAGGTTTTCCGAGATCTTCCGATCTTCAATGTCACCGAAGGTctcacactggcgagaaaccttgcGTGTGTCGAGTTTGTGGGAAAGGTTTTTCACGTAGTAATAAGTTATCCCGGCACATGCGCGTGCACACCGGCCAGCGGCCGTACAAGTGCACATACTGCGAGAAGGCGTTCTCACAGAGCAACGACCTCAACCTACACATACGCCGCCACACTGGCGATCGGCCCTACATCTGCGAAATATGCGGGGACAGGTTTATACAGGGTACTGCACTACAGAACCACAGAAGGGCTCACGGTCACTTTCCGCCTCCTCCCGCAGAGGCTCCTCCCGAGGTCCAAACAATGACTTTTACAATCACAAATATAAGCCATAATAATAGTCACTAA
Protein Sequence: MASPNQETKIKMEELCRTCLSKDNELHSLFDSLFGSTITLDYIVTSTTGLKISQNDGLPSTICCECKEKASNAFEFKKKSEEANMSLRGLLKKEKENAISMKLLNQTNSSDVKTEDLSAHDNDDYTDNEFNVSLSSGPDLHEPTHEGVKTEHENLDRKSCFVCKSCLVVFDTHCKLQEHQKICIKVECEETNRTYCPLCGTCYNGAENLTKHMWENHADLMGPKKRGRPKKMLTSTILNKLSENGFCITSMPAKKIECEFCKEHFDTKEELGSHAITHKDTKVLRCLQCKKIYLDRDHFDHHSCIDEKNGISNLENDSAKIEPNEKVLQNYPSEITLRECLDPNIDMATINMLTVCNACSCVLQSEADLINHRDAEHPELSHRCNLCTKVFASLRSAARHRSICKQIERKYKCSTCGLKFAYEISLNKHILRYHEGQSVSVKFIDSKTKREERQFQCDTCNRCFYKRDLLVKHTKIHMPIENFYQCDICEKKFHRSDNLRSHKRVHQPQREKNSTSNCLCLYCGRSFSNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGEKPCVCRVCGKGFSRSNKLSRHMRVHTGQRPYKCTYCEKAFSQSNDLNLHIRRHTGDRPYICEICGDRFIQGTALQNHRRAHGHFPPPPAEAPPEVQTMTFTITNISHNNSH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00072259;
90% Identity: iTF_01031332; iTF_00908165; iTF_01029607; iTF_00038060; iTF_00888524; iTF_00039092; iTF_01027578; iTF_00952069; iTF_00772245; iTF_01030471;
80% Identity: -