Basic Information

Insect: Mythimna lalbum
Gene Symbol: Znf296
Assembly: GCA_949319445.1
Location: OX439344.1:26646265-26656955[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.28 27 6.5 2.1 1 21 160 180 160 181 0.95

2 12 0.0015 0.15 13.6 0.7 2 20 194 212 193 212 0.96

3 12 0.038 3.8 9.2 0.1 2 23 256 277 255 277 0.96

4 12 0.011 1 10.9 0.3 1 20 381 400 381 402 0.92

5 12 3.9e-05 0.0039 18.6 0.8 1 23 410 433 410 433 0.98

6 12 0.00015 0.014 16.8 4.7 1 23 454 476 454 476 0.98

7 12 2.5e-06 0.00024 22.4 3.6 1 23 483 505 483 505 0.99

8 12 1.3e-07 1.3e-05 26.3 2.3 3 23 519 539 517 539 0.96

9 12 3.1e-05 0.003 18.9 3.2 1 23 545 567 545 567 0.99

10 12 2.7e-06 0.00027 22.2 2.6 2 23 574 595 573 595 0.96

11 12 1.6e-07 1.6e-05 26.1 1.4 1 23 601 623 601 623 0.99

12 12 0.0038 0.37 12.3 0.1 1 23 629 651 629 651 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.28	27	6.5	2.1	1	21	160	180	160	181	0.95
2	12	0.0015	0.15	13.6	0.7	2	20	194	212	193	212	0.96
3	12	0.038	3.8	9.2	0.1	2	23	256	277	255	277	0.96
4	12	0.011	1	10.9	0.3	1	20	381	400	381	402	0.92
5	12	3.9e-05	0.0039	18.6	0.8	1	23	410	433	410	433	0.98
6	12	0.00015	0.014	16.8	4.7	1	23	454	476	454	476	0.98
7	12	2.5e-06	0.00024	22.4	3.6	1	23	483	505	483	505	0.99
8	12	1.3e-07	1.3e-05	26.3	2.3	3	23	519	539	517	539	0.96
9	12	3.1e-05	0.003	18.9	3.2	1	23	545	567	545	567	0.99
10	12	2.7e-06	0.00027	22.2	2.6	2	23	574	595	573	595	0.96
11	12	1.6e-07	1.6e-05	26.1	1.4	1	23	601	623	601	623	0.99
12	12	0.0038	0.37	12.3	0.1	1	23	629	651	629	651	0.97

Sequence Information

Coding Sequence: ATGGCCCCTACTAATCaagaaaccaaaataaaaattgaagaaTTGTGTAGAACGTGTTTGTCTAAAGATAATGCATTATACTCGTTATTTGATGTACTTATTGATTCTACAATCACATTAGATTACATAGTAACTTCAACCACTGGGATAAAGataagcAAAAATGATGGCTTACCTTCAACGATTTGCTGCGAGTGTAAAGAAAAAGCATCAAAGGCATTTGAATTCAAGAAAAAATCGGAAGAAGCTAATATGTCCCTTAGAgggctattaaaaaaagaaaagaaggaaaGTGCGTTATCTATGAAAGTTTTGAATCAAACTAATGCATCAGATGTGAAGACTGAAGATTTGTCATCACATGACCATGATGACTACATTGATAGTGATTTCAATGCTTCCCTAAGTAGTGGACCAGATTTACATGAACAGGAAGCTGTTAAAATTGAGCATGAGAGCTTAGATCGCAAGTCATGCTTTGTTTGCAAAAGCTGCTTAGTGGTTTTCGATACTCACTGCAAATTACAAGAACATCAGAAAATATGTATCAAAGTTGAGTGTGAAGAAACCAACCGAACATACTGTCCACTTTGCGGCACGTGCTACAATGGCACTGAGAACTTAACTAAACATATGTGGGATATTCATTCAGATCTCATGGGCCCAAAAAAGAGAGGCAGACCTAAGAAGATGTTAACTAGTACCATTCTAAACAAGTTATCAGAAAATGGATTTTGCATATCATCAATGCCAGCTAAAAAGATTGAGTGTGAATTTTGCAACCTACTTTTCGATACCAAAGAAGAATTAGGATCACATGCTTTAACCCATAAAGATACGAAAGTGCTACGTTGCATACAATGTAAGAAAATTTACCTCGATAGGAAAATGTTTGATCACCATAGCTGTATTGACGAGAAAACTggtataaataatttagaaaatGACCCCGCTAAAATAGAAACCAATGAAAAAAAGCCACCGAATTATCCATCAGAAATTACACTTCGAGAAATTTTAGACCCGAACATAGATATGGCCACCATCAACATGCTTACAGTATGTAGTGCTTGTAGTTGCGTATTGCTATCAGAAGCGGATCTCATAAACCATCGTGATGCTGAACACCCAGAGCTTTCTCACCGGTGCAATCTCTGCactaagGTGTTTGCATCTTTACGATCAGCGGCGCGCCATAGAAGTATATGTAagcaaatagaaagaaaatataaatgtaatacGTGTGGACTGAAATTCGCTTATGAAATATCTctgaataaacatattttaagatATCATGAGGGTCAAAGCGTTTCCGTTAAATTTATTGACTCTAAAACAAAACGAGAAGAGAGACAGTTTCAGTGTGATACTTGCAATAGATGTTTTTACAAGAGGGATTTGCTTgttaaacatacaaaaatacacatgCCAATAGAAAACTTTTATCAATGCGATATTTGTGAAAAGAAGTTTCACAGGAGTGACAATCTTCGCTCTCACAAACGCGTTCATCAGCCGCAGCGCGAAAAGAGTTCAACTAGTAATTGTTTATGCCTGTATTGCGGCCGCAGTTTCTCTAACTCGTCGAATTTAATCGTCCACATGCGGCGCCATACCGGAGAGAAGCCCTACAAATGTGATTTTTGTGGCAAAGGCTTTCCGAGAtcttccgatcttcagtgtcaCCGAAGGTCTCACACCGGAGAGAAACCTTGCATATGCCGTGTTTGTGGTAAAGGTTTTTCACGCAGTAACAAGTTGTCCCGCCACATGCGCGTGCACACTGGCCAGCGGCCGTACAAGTGTACTTACTGCGAGAAGGCGTTCTCGCAGAGCAATGACCTCAACCTACACATACGCCGGCACACGGGCGATCGCCCCTACATCTGCGAAGTGTGCGGGGATAGATTCATACAGgGTACTGCATTACAGAATCACCGAAGGGCTCATGGTCACTTTCCGCCTCCTCCCCCAGAGGCTCCGCCCGAAGTCCAAACACTGACGTTTACAGTCCAAAACATAAGCCATAATAATAGTCATTGA
Protein Sequence: MAPTNQETKIKIEELCRTCLSKDNALYSLFDVLIDSTITLDYIVTSTTGIKISKNDGLPSTICCECKEKASKAFEFKKKSEEANMSLRGLLKKEKKESALSMKVLNQTNASDVKTEDLSSHDHDDYIDSDFNASLSSGPDLHEQEAVKIEHESLDRKSCFVCKSCLVVFDTHCKLQEHQKICIKVECEETNRTYCPLCGTCYNGTENLTKHMWDIHSDLMGPKKRGRPKKMLTSTILNKLSENGFCISSMPAKKIECEFCNLLFDTKEELGSHALTHKDTKVLRCIQCKKIYLDRKMFDHHSCIDEKTGINNLENDPAKIETNEKKPPNYPSEITLREILDPNIDMATINMLTVCSACSCVLLSEADLINHRDAEHPELSHRCNLCTKVFASLRSAARHRSICKQIERKYKCNTCGLKFAYEISLNKHILRYHEGQSVSVKFIDSKTKREERQFQCDTCNRCFYKRDLLVKHTKIHMPIENFYQCDICEKKFHRSDNLRSHKRVHQPQREKSSTSNCLCLYCGRSFSNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGEKPCICRVCGKGFSRSNKLSRHMRVHTGQRPYKCTYCEKAFSQSNDLNLHIRRHTGDRPYICEVCGDRFIQGTALQNHRRAHGHFPPPPPEAPPEVQTLTFTVQNISHNNSH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00072259;
90% Identity: iTF_01028545;
80% Identity: -