Basic Information

Insect: Mimas tiliae
Gene Symbol: -
Assembly: GCA_905332985.1
Location: HG995253.1:1770059-1775533[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00038 0.026 15.4 1.5 1 23 289 312 289 312 0.96

2 11 0.016 1.1 10.3 1.9 1 19 328 346 328 350 0.90

3 11 3.3e-05 0.0023 18.7 3.8 2 23 356 377 355 377 0.97

4 11 1.4e-05 0.00098 19.8 0.3 1 23 381 404 381 404 0.96

5 11 0.75 51 5.0 1.6 1 23 407 429 407 429 0.92

6 11 0.00048 0.033 15.0 0.2 2 23 510 531 509 531 0.95

7 11 0.21 14 6.7 0.1 2 23 551 573 550 573 0.96

8 11 9.7e-07 6.7e-05 23.5 4.1 1 23 579 601 579 601 0.98

9 11 0.00072 0.05 14.5 1.6 1 23 606 628 606 628 0.98

10 11 0.00049 0.034 15.0 4.6 2 21 635 654 634 657 0.95

11 11 0.0041 0.28 12.1 1.3 3 19 697 713 696 715 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00038	0.026	15.4	1.5	1	23	289	312	289	312	0.96
2	11	0.016	1.1	10.3	1.9	1	19	328	346	328	350	0.90
3	11	3.3e-05	0.0023	18.7	3.8	2	23	356	377	355	377	0.97
4	11	1.4e-05	0.00098	19.8	0.3	1	23	381	404	381	404	0.96
5	11	0.75	51	5.0	1.6	1	23	407	429	407	429	0.92
6	11	0.00048	0.033	15.0	0.2	2	23	510	531	509	531	0.95
7	11	0.21	14	6.7	0.1	2	23	551	573	550	573	0.96
8	11	9.7e-07	6.7e-05	23.5	4.1	1	23	579	601	579	601	0.98
9	11	0.00072	0.05	14.5	1.6	1	23	606	628	606	628	0.98
10	11	0.00049	0.034	15.0	4.6	2	21	635	654	634	657	0.95
11	11	0.0041	0.28	12.1	1.3	3	19	697	713	696	715	0.97

Sequence Information

Coding Sequence: ATGGAGCGGGAGGTGGAAAATTCCGACCATGATAACAATTACCCAGTATTACTGCTGCCAAAACGGTGTACATCATTGGAAACAAACTGTGATGTGACTGATAATGTTTATATCGACTTGAACATTACCTCACCAGACACCGAAGGTAACGAAACATGCATATACTCTGGCTTTTGTAATGTTAAACTTGTGGATAGTTACAATGTTAACTTGGAGCTGAATGATGATATTGGACATGATTCTCCGACCAAGGACAATCAGGCATTTCCAGCGTACAATCAATCACAAGTCTGGATAGATCCAGTACGGAGTCCATATGTATACAACCATTATGATGGTAAAATGCAGGAATGTTACTCTATACGTCAAGAAAGTCATACGGGCAATATAACTGTGGAGCAACATAATACATACATAACTCAAAATGTTTACAATTGTAATGAGAGTGTACAGGTGTCGCCGGATTTTGAGCATAAAAAGTTTAGGAAGCATGAAAACTCTCAGGGCTTCGATCCAAATTTCAATTTGTACGAAGAAGATGAATTTGAATGTGGAGTGTTCCTTTCTCAATTGTCAGAGGAGATAATACATGAGAAAGAGATCAAGGCTAGAGAGGAGCGGAAATTCATAGGGCTTCAGAGTGAGAATAATGCTTTAAAGCAGCTTATGTCGAGTGATATTCAGTCGGTGACTAAGCAACGGAAGACTATTTTGTTCTTAGGTCATGACTCCCAGTCTGGACAGACTATACAAAATATATCTATGAATGATCCTTCTCTGGAATGCGTTGGGAATGGGGAAATTGACCATGAAGTTATTATTGAGGACTCATCAACATCATCCTCAAACCCAAATCAGAAAAAGTACCAGTGTGACAAATGCAAACAAATATTTGATCAAATATCCACATTCAAGCAACACATGGTCAGCACACACAAACATGTATACGACCTTCATTCGCGACCAATAGGAGATGTTAAGTATATGTGCACTGAATGTGGAAAAAACCTCAAGAATCAGGAGAAGTTCGAACTTCACTGTATGGGTCACGGTGATCCGGAACTAGAATGTAACAAGTGCCATAAAGTGTTCGCTTCAAAATTCACCTTACGCACTCACCGTAAGATCCATAATAGAAAATACCCATGCACCTACTGCACCAGATCTTATTCTACTCCCGAAGAGTTAAGGATCCACGTGTCCAAAATACATTATGTATTTATGTGCAACAATTGCCCATATACAGCAAATAAATATACAGATTTAGTGGCTCATTGCTCCACACACAAAGACTTTAAAATTAAAGAGTCTAGTGAGACAGATTTTGCTGAATCTCTGATAGAGGATTTGAGTGAATCTGATATTATTGCGTCATCGCCTGAAGAGCCACTGCTGCAGGAAAAGAAGGAGGGGGAGGAAATGAGAAGTCAGGCGGAGGAAGCAGACTCTGTGATTGCAAAGGTGATGTCCAATAAAATGTTTCTGTTGCACGCTAAGAAGGCGCGACGACATCGCAAGTATAATAAGGTCTGCGAAGTCTGTCTAAAAACCTTCGATAGGATCGGTGACTTAAAACGTCATCTTATAGAACACGTAATAAGAAGCACCCTGGCGAAGACACCAGTAGGCAAAGACGGGACCCTAAGCATCCAGTGCGAGGTGTGTCAAGCAGAGACTTTCGCTAGGATAGACAGGTACAAGGCACATCTCAGAGAACATGCAAAACTAACTCTATACAAATGTACCTTCTGCGATAAATCTTTTAGCGATTCTAGTAACTTCTCAAAACATAAAAAGATCCATGGGACGACATATTTCCAATGCGATTTGTGCCAAAGAAAATTTAACTCTAAAAAGATGATTGCACAGCATATGGAGTACCATAATAAGCATTCGCCAGTAAAATGTAAATATTGCGGAAAAGTGTTTCATTTTGAGTCAATGCTTAATAAACATATTAAATGTACTCATGCCAAAGAGCTGTACACGAAGTTCAAGTGTAGATTTTGTCATCATTACTATAAAACCTTGAAGGAGAAATGGGATCATGAGTGGACAATACATAACGTTAGGAAAATGGTCGTTGATTGTTTAATTTGTGGGATGAAGTTTAGGAAGTATTCTGAGCTTAAACGCCATTGCTACGATGAGCATGAAATGGAAATACCACCAGCTAAAAAATTGATGAAGCGGTTTCAAAAAGATTGA
Protein Sequence: MEREVENSDHDNNYPVLLLPKRCTSLETNCDVTDNVYIDLNITSPDTEGNETCIYSGFCNVKLVDSYNVNLELNDDIGHDSPTKDNQAFPAYNQSQVWIDPVRSPYVYNHYDGKMQECYSIRQESHTGNITVEQHNTYITQNVYNCNESVQVSPDFEHKKFRKHENSQGFDPNFNLYEEDEFECGVFLSQLSEEIIHEKEIKAREERKFIGLQSENNALKQLMSSDIQSVTKQRKTILFLGHDSQSGQTIQNISMNDPSLECVGNGEIDHEVIIEDSSTSSSNPNQKKYQCDKCKQIFDQISTFKQHMVSTHKHVYDLHSRPIGDVKYMCTECGKNLKNQEKFELHCMGHGDPELECNKCHKVFASKFTLRTHRKIHNRKYPCTYCTRSYSTPEELRIHVSKIHYVFMCNNCPYTANKYTDLVAHCSTHKDFKIKESSETDFAESLIEDLSESDIIASSPEEPLLQEKKEGEEMRSQAEEADSVIAKVMSNKMFLLHAKKARRHRKYNKVCEVCLKTFDRIGDLKRHLIEHVIRSTLAKTPVGKDGTLSIQCEVCQAETFARIDRYKAHLREHAKLTLYKCTFCDKSFSDSSNFSKHKKIHGTTYFQCDLCQRKFNSKKMIAQHMEYHNKHSPVKCKYCGKVFHFESMLNKHIKCTHAKELYTKFKCRFCHHYYKTLKEKWDHEWTIHNVRKMVVDCLICGMKFRKYSELKRHCYDEHEMEIPPAKKLMKRFQKD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00858885; iTF_00063873; iTF_00341653; iTF_00859782; iTF_01359140; iTF_00428391; iTF_00819431; iTF_01430159; iTF_00820341; iTF_00429275; iTF_00787931; iTF_00290957;
90% Identity: iTF_00858885;
80% Identity: -