Basic Information

Insect: Theretra japonica
Gene Symbol: -
Assembly: GCA_033459515.1
Location: CM065944.1:1317377-1320320[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00029 0.019 15.7 0.9 1 23 291 314 291 314 0.96

2 12 0.016 1 10.3 1.9 1 19 330 348 330 352 0.90

3 12 3.3e-05 0.0021 18.7 3.8 2 23 358 379 357 379 0.97

4 12 1.3e-05 0.00081 20.0 0.7 1 23 383 406 383 406 0.97

5 12 0.00055 0.035 14.8 0.8 1 23 409 431 409 431 0.98

6 12 0.00048 0.031 15.0 0.2 2 23 511 532 510 532 0.95

7 12 0.078 5 8.1 0.2 2 23 552 574 551 574 0.96

8 12 9.7e-07 6.2e-05 23.5 4.1 1 23 580 602 580 602 0.98

9 12 0.00052 0.034 14.9 2.5 1 23 607 629 607 629 0.98

10 12 0.0013 0.084 13.7 4.5 2 21 636 655 635 658 0.94

11 12 6.7 4.3e+02 2.0 3.9 1 19 666 684 666 689 0.88

12 12 0.0041 0.26 12.1 1.3 3 19 698 714 697 716 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00029	0.019	15.7	0.9	1	23	291	314	291	314	0.96
2	12	0.016	1	10.3	1.9	1	19	330	348	330	352	0.90
3	12	3.3e-05	0.0021	18.7	3.8	2	23	358	379	357	379	0.97
4	12	1.3e-05	0.00081	20.0	0.7	1	23	383	406	383	406	0.97
5	12	0.00055	0.035	14.8	0.8	1	23	409	431	409	431	0.98
6	12	0.00048	0.031	15.0	0.2	2	23	511	532	510	532	0.95
7	12	0.078	5	8.1	0.2	2	23	552	574	551	574	0.96
8	12	9.7e-07	6.2e-05	23.5	4.1	1	23	580	602	580	602	0.98
9	12	0.00052	0.034	14.9	2.5	1	23	607	629	607	629	0.98
10	12	0.0013	0.084	13.7	4.5	2	21	636	655	635	658	0.94
11	12	6.7	4.3e+02	2.0	3.9	1	19	666	684	666	689	0.88
12	12	0.0041	0.26	12.1	1.3	3	19	698	714	697	716	0.97

Sequence Information

Coding Sequence: ATGGACCGGGAACACGAAAATCCCGAACAGGAGAACAATTACCCTGTGTTGCTGTTGCCGAAGAAATGCACTTCTCTGGAAACAAACTGTGAGGTGACGGATAATGTTTACATCGACATCAATATCACCTCTCCTGACACTGAAGGTAATGAAACGTGCATATACTCTGGCTTCTGCAATGTAAAACTTGTGGACAGTTATAATGTGAACTTGGAATCACATGATGATTTGGAACATGACTCTCCGGTGAACATAAAGGACAATCAATCATATCCTCCATACAATCAGTCACAAGTGTGGATAGATCCTATCAGAAGTCCATATGTATACAACCACTGTGATGGTAAGATGCAAGAATGCTACTCCATATGCCATGAGAGCCATACTGGACATATCACGGTAGAACAACATAACACTTACATAACTCAAAATGTCTATAACtgcaatgaaaatattcaaGTGTCACCTGATTTTGAGCATAAAAAGTTCAGGAAACATGACAACCCGCAGAGCTCTGATCCAAACTTTAACTTGTACGAAGAAGATGAGTTTGAATGTGGGGTGTTCTTGTCCCAGTTGTCCGAAGAAATTATAAATGAGAAAGAGAACCGAGCTAGGGAGGAAAGGAAGTTCATAGGTTTACAAAGTGAGAATAATGCGTTGAAACAGTTAATGTCAAGTGACATTCAATCGGTGACTAAGCAACGTAAAACTATATTGTTCCTAGGACATGACTCTCATTCCGGTCAGACTATACAAAACATATCCATGAATGATCCGTCTCTGGAATGTGTTGGCAATGGAGAAATTGACCATGAAGTTGTTATTGAAGACTCATCTACATCATCATCCAACCCCAACCAGAAGAAATACCAATGTGACAAATGCAAGCAAATATTTGACCAAATATCAGCATTCAAGCAGCACATGGTAAGCACACACAGACATGTCTACGACGTCCAATCTCGACCAATAGGCGACGTCAAGTACATGTGCACTGAATGTGGAAAAAATCTCAAGAACCAAGAGAAATTCGAACTCCACTGCATGGGTCACGGCGACCCAGAACTAGAATGCAACAAGTGCCACAAAGTGTTCGCTTCAAAATTCACCTTACGCACTCACCGTAAGATTCATAATCGGAAGTATCCTTGCACTTACTGTACCAGAACTTACGCTACATCCGAGGAGTTGAAACTGCACATGACCAAAATACATTTTGCCTTCATGTGTAACAACTGCCCGTATACTACAAGCAAGTATTCAGATCTGGTAAACCATTGGTCCACTCATAAAGATTTCAAGATTAAGGAATCTAGTGAAACTGACTTTGCGGAGTCCCTCAGCCTGAGTCTGAGTGAATCTGACATTATCACCTCGTCGCCTGTGGAACAACCACCGCCGGAGATGATAGAGGAAACGAAGAGGGATCAAACTGAAGAAGCAGACTCTGTGATCGCTAAGGTGATGGCGAATAAGATGTTTTTGCTGCACGCTAAAAAGGCGCGAAGGCATCGCAAGTACAATAAGGTTTGCGAAGTGTGCCTGAAAACCTTCGACAGGATAGGCGATTTGAAGAGACATTTAATCGAACACGTCATTAGAAGCACATTGGCGAAAACTCCTGTCGGTAAAGACGGCACTTTGAGCATCCAATGCGAGGTCTGCCAGGCAGAAACCTTCACGAGGATCGACAGGTACAAAGCCCATCTTAGGGAACACGCTAAACTGACCCTGTACAAATGCACTTTCTGCGACAAATCCTTTAGCGACTCCAGCAATTTCTCCAAACACAAGAAAATTCATGGGACCACGTACTTTCAATGCGATTTGTGCCAGAgaaaatttaattctaaaaagaTGATTACCCAGCATATGGAGTACCATAATAAGCATTCGCCAGTGAAATGCAAATATTGCGGTAAAGTGTTTCATTTTGAATCCATGCTTAATAAACACGTAAAATGTACTCATGCGAAGGAATTGTatactaaatttaaatgtagattTTGCCATCATTACTTCAAGACCTTGAAGGAGAAATGGGATCATGAGTGGACGATTCATAACGTTAGGAAGATGGTAGTTGATTGTTTAATCTGTGGTATGAAATTCAGGAAATATTCGGAACTGAAACGCCACTGTTATGATGAACACGATATGGAAATACCTCCGGCTAAGAAGCTCATGAAAGGCATCCAAACCGATTGA
Protein Sequence: MDREHENPEQENNYPVLLLPKKCTSLETNCEVTDNVYIDINITSPDTEGNETCIYSGFCNVKLVDSYNVNLESHDDLEHDSPVNIKDNQSYPPYNQSQVWIDPIRSPYVYNHCDGKMQECYSICHESHTGHITVEQHNTYITQNVYNCNENIQVSPDFEHKKFRKHDNPQSSDPNFNLYEEDEFECGVFLSQLSEEIINEKENRAREERKFIGLQSENNALKQLMSSDIQSVTKQRKTILFLGHDSHSGQTIQNISMNDPSLECVGNGEIDHEVVIEDSSTSSSNPNQKKYQCDKCKQIFDQISAFKQHMVSTHRHVYDVQSRPIGDVKYMCTECGKNLKNQEKFELHCMGHGDPELECNKCHKVFASKFTLRTHRKIHNRKYPCTYCTRTYATSEELKLHMTKIHFAFMCNNCPYTTSKYSDLVNHWSTHKDFKIKESSETDFAESLSLSLSESDIITSSPVEQPPPEMIEETKRDQTEEADSVIAKVMANKMFLLHAKKARRHRKYNKVCEVCLKTFDRIGDLKRHLIEHVIRSTLAKTPVGKDGTLSIQCEVCQAETFTRIDRYKAHLREHAKLTLYKCTFCDKSFSDSSNFSKHKKIHGTTYFQCDLCQRKFNSKKMITQHMEYHNKHSPVKCKYCGKVFHFESMLNKHVKCTHAKELYTKFKCRFCHHYFKTLKEKWDHEWTIHNVRKMVVDCLICGMKFRKYSELKRHCYDEHDMEIPPAKKLMKGIQTD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01010670;
90% Identity: iTF_00787931;
80% Identity: -