Basic Information

Insect: Sphinx pinastri
Gene Symbol: -
Assembly: GCA_947568825.1
Location: OX387630.1:1723905-1727612[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00038 0.031 15.4 1.5 1 23 290 313 290 313 0.96

2 11 0.014 1.2 10.4 1.8 1 19 329 347 329 351 0.90

3 11 3.3e-05 0.0027 18.7 3.8 2 23 357 378 356 378 0.97

4 11 2.9e-05 0.0024 18.8 0.5 1 23 382 405 382 405 0.96

5 11 0.15 12 7.2 1.9 1 23 408 430 408 430 0.92

6 11 0.00047 0.039 15.0 0.2 2 23 512 533 511 533 0.95

7 11 0.078 6.4 8.1 0.2 2 23 553 575 552 575 0.96

8 11 9.6e-07 7.9e-05 23.5 4.1 1 23 581 603 581 603 0.98

9 11 0.0032 0.26 12.4 2.1 1 23 608 630 608 630 0.98

10 11 0.0018 0.15 13.2 4.3 2 21 637 656 636 659 0.95

11 11 0.008 0.66 11.2 1.5 3 19 699 715 698 717 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00038	0.031	15.4	1.5	1	23	290	313	290	313	0.96
2	11	0.014	1.2	10.4	1.8	1	19	329	347	329	351	0.90
3	11	3.3e-05	0.0027	18.7	3.8	2	23	357	378	356	378	0.97
4	11	2.9e-05	0.0024	18.8	0.5	1	23	382	405	382	405	0.96
5	11	0.15	12	7.2	1.9	1	23	408	430	408	430	0.92
6	11	0.00047	0.039	15.0	0.2	2	23	512	533	511	533	0.95
7	11	0.078	6.4	8.1	0.2	2	23	553	575	552	575	0.96
8	11	9.6e-07	7.9e-05	23.5	4.1	1	23	581	603	581	603	0.98
9	11	0.0032	0.26	12.4	2.1	1	23	608	630	608	630	0.98
10	11	0.0018	0.15	13.2	4.3	2	21	637	656	636	659	0.95
11	11	0.008	0.66	11.2	1.5	3	19	699	715	698	717	0.97

Sequence Information

Coding Sequence: ATGGACCGGGAAAGAGAAAGTTCCGACCAGGACAACAATTATCCGGTGCTATTGCTGCCGAAACGGTGCACATCACTGGAAACGAACTGTGAGGTGACGGATAACGTGTACATAGATTTGAACATCACCTCTCCGGACACTGAAGGTAACGAGACTTGTATCTACTCCGGCTTTTGTAACGTTAAATTAGTAGACAGTTACAATGTTAATCTGGAGCTCAATGATGACATGGTACATGATTCTCCACCAATGAAGGACAATCAGACATTTCCCACGTACAATCAATCGCAGGTCTGGATAGACCCGGTCAGGAGTCCGTACGTATATAACCACTATGATGGTAAAATGCAAGGTTGTTACTCCATACGCCAAGAAACTCATACAGGGAACATAACGGTGGAACAACACAACACTTACATCACTCAAAATGTGTACAACTGCAATGAGAATGTACAGATTTCACCAGACTTTGAACATAAAAAATTCAGGAAGCATGACAACTCACAGAGCTCAGATCAAAATTACAATTTGTATGAGGAAGATGAGTTTGAGTGTGGAGTGTTCCTGTCTCAGTTGTCCGAGGAGATTATAAATGAGAAAGAGAATAGGGCTAGAGAGGAACGGAGGTTCATAGGGCTGCAGAGTGAAAATAATGCTTTGAAACAACTGATGTCAAGTGATATACAGTCGGTGACCAAACAACGGAAGACTATTTTGTTCCTAGGTCATGATTCCCAGTCCGGTCAGACCATACAGAATATATCAATGAATGATCCATCCCTGGAGTGTATTGGGAACGGGGAGATTGACCATGAAGTTATTATTGAAGACTCATCAACATCATCATCTAATCCAAACCAGAAAAAATACCAGTGTGACAAATGTAAACAAATATTTGATCAAATATCAACATTCAAACAACACATGGTGAGCACACACAAACACGTTTACGACCTTCATTCCAGACCAATAGGCGATGTGAAATACATGTGTACCGAATGCGGGAAGAACCTCAAGAACCAAGAGAAGTTCGAACTGCACTGCATGGCTCACGGCAACCCGGAACTAGAATGCAACAAGTGCCACAAAGTGTTCGCTTCAAAATTCACCTTACGCACTCACCGTAAGATCCATAATCGGAAGTACCCCTGCACGTACTGCACCCGATCATACGCTACCTCTGAAGAACTAAGGCAGCATGTATCCAAAATCCATTTTGTATTTATGTGCAATAACTGCCCTTACACTGCTAATAAATATTCGGATTTAATGAACCACTGCGCCACTCACAAAGACTTCAAAATCAAGGAGTCTAGCGAAACCGATTTTGCTGAGTCATTGATTGAGGATCTGAGTGAATCTGATATCATTGCTTCATCACCTGAAGAGTCTTTACTGCAAGAGAGGGAGGAGGAGAGAGACGTGAAGAGGGATATAGCTGAAGAAGCAGATTCAGTGATAGCGAAGGTCATGTCCAATAAGATGTTCCTGTTACACGCTAAAAAGGCGCGAAGACATCGTAAATATAATAAAGTCTGCGAAGTTTGTCTAAAAACCTTCGACAGGATCGGCGACTTGAAACGCCATCTCATAGAACACGTCATACGAAGCACGTTGGCAAAGACCCCAGTCGGAAAAGATGGGACCCTGAGTATTCAATGCGAGGTCTGCCAAGCGGAGACCTTCACAAGAATAGACAGGTACAAAGCACATCTGAGAGAACATGCTAAATTAACTTTATATAAATGTACGTTCTGCGACAAATCCTTTAGCGATTCTAGCAACTTCTCTAAACATAAAAAGATCCATGGAACGACGTATTTTCAATGTGATTTGTGTTTAAGAAAGTTTAACTCGAAAAAAATGATCACGCAACATATGGAGTACCATAACAAACACTCGCCTGTGAAATGCAAGTATTGCGGGAAGGTATACCACTTTGAATCTATGCTTAACAAGCATATAAAATGCACTCATGCTAAGGAACTATACACGAAATTCAAATGTAGGTTTTGTCATGATTACTTCAAAACCTTGAAGGAGAAATGGGACCATGAATGGACTATACATAATGTGAGAAAAATGGTCGTAGATTGTTTGGTGTGTGGTATGAAGTTTAGGAAGTATTCCGAGCTAAAACGTCATTGTTATGATGATCATGATATGGAGATACCTCCAGCTAAAAAGCTGATGAAGAGGTTTCAAAAAGACTAA
Protein Sequence: MDRERESSDQDNNYPVLLLPKRCTSLETNCEVTDNVYIDLNITSPDTEGNETCIYSGFCNVKLVDSYNVNLELNDDMVHDSPPMKDNQTFPTYNQSQVWIDPVRSPYVYNHYDGKMQGCYSIRQETHTGNITVEQHNTYITQNVYNCNENVQISPDFEHKKFRKHDNSQSSDQNYNLYEEDEFECGVFLSQLSEEIINEKENRAREERRFIGLQSENNALKQLMSSDIQSVTKQRKTILFLGHDSQSGQTIQNISMNDPSLECIGNGEIDHEVIIEDSSTSSSNPNQKKYQCDKCKQIFDQISTFKQHMVSTHKHVYDLHSRPIGDVKYMCTECGKNLKNQEKFELHCMAHGNPELECNKCHKVFASKFTLRTHRKIHNRKYPCTYCTRSYATSEELRQHVSKIHFVFMCNNCPYTANKYSDLMNHCATHKDFKIKESSETDFAESLIEDLSESDIIASSPEESLLQEREEERDVKRDIAEEADSVIAKVMSNKMFLLHAKKARRHRKYNKVCEVCLKTFDRIGDLKRHLIEHVIRSTLAKTPVGKDGTLSIQCEVCQAETFTRIDRYKAHLREHAKLTLYKCTFCDKSFSDSSNFSKHKKIHGTTYFQCDLCLRKFNSKKMITQHMEYHNKHSPVKCKYCGKVYHFESMLNKHIKCTHAKELYTKFKCRFCHDYFKTLKEKWDHEWTIHNVRKMVVDCLVCGMKFRKYSELKRHCYDDHDMEIPPAKKLMKRFQKD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01010670;
90% Identity: iTF_00858885;
80% Identity: -