Mbra007667.1
Basic Information
- Insect
- Microctonus brassicae
- Gene Symbol
- lov
- Assembly
- GCA_940306215.1
- Location
- OW675805.1:5576378-5579111[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.3e-18 3.7e-15 55.5 0.0 1 44 516 559 516 560 0.96
Sequence Information
- Coding Sequence
- ATGTCGAGCACCGCGGAAAGTCCCGACGGTGGAATGGCACTGCAGTCACACTACTCTTTACGATGGAACAATCATCAAACTCATATATTGCAAGCATTCGAAGCACTTCTTCATGAGGAGATACTCGTTGATGTCACTCTCGTGTGCTCGGACATCAGTATACGCGCCCACAAGGTCGTTCTTAGTGCCTGCAgTCCGTTTTTCGAGAGGATATTTGCGGAACATCCGTGCAAGCATCCGGTGATAGTACTCAAGGACTTTGCTGGTCAAGAAATAGCAGCACTGATTGACTTTATGTATCGTGGTGAAGTGCGCGTTGGACGAGAAGATCTTTCTGGATTAATGAGTGCTGCAGAAAGTTTACAGGTGAGAGGTTTAGCATCTTCTGAGCCAAGGCCTGCAAGTCCACCTGATACACCAATAGAAACACCAACAGATCTTTTACTTGGCGATCGACTCACGCCTGAAGTTACGAGACAGGAGAGTCCTATTGAAGACGACATTGCATCAGATACAACGCCAACAAGAGAACCAAGAGAATTTTCATCCGATGAACATCGCGATCGATTGCCACATATGacacatttaaatttttccctTCGTGAATTGAGAGATACGTGTAATTCACCACTAATGCCAAGAAGAAAGCAAGCCAGACCGAGAAGAAGGTCTGGTGAAATGATACCTCAAGACCTAAGTAGACCTCATCCACCATCAAGTTTAAGTCCACCAAgtggattaaatttaattagtcATCATCAATTACAACAATTATCACCGCCAAATTTTCACCATCAACATCAACAAGCTCAACCAAGTCAACAGCAATTACAAGACTTATCGATAAATCATGATCAAAATCGTGACGATATTGcggaaaatttatcaatgaaacgATCATTATCGCCGTGTTTACCATCAGAACACGGAATTAAAACTGAAAGTGAAACGGCAAGTAGTCCAAGAGGTTCACCATTAACTGGCACGAGTCTTCATCCCGATGGTTCACTTCATGATTTACCAGCGGCAAGTTTACCGTCAATGTCAGCATTATCATTAACTCCACCTCATCATCACAGTGAGTACCTGACAAGTTTAGGCCAATTAGCAGCACAGTGGCTACCTAATCATGCACAAAGTCAGTTACAAAATCCGTCGCATCATCCACGAGAAGGTAGTCCACAAAGTCACAATAGATTACATCCTTTTCAACATCCAGATTCGCCATTAACATCACGACGATCAGTCGCGGTTTTTCCGATGGACGGTGTATCACCACTTGGTCCTGGTGGCGGGCTATTTCCCCACGGTGGTGGAATAGAACGCGGATCACTTCTTGCCGATATTCATGATAGCTTCAAACCAGAAGCCCTTCATGGATTATTTGGTAGTGCTAATTTAGTTCATCATCCGGTtaaaaagtcgaaaaaacaTCGAGGCGACAGTGATGGCCACAGAAGATGGTCGGATCATGGTAGAGGAATGCCAATTGGCAGACCAAAAGGACAACACAGTGCTCCAAGAGGTGGTCCACCAAGATCGTGGACGAATGCCGAATTAACTGAGGCATTACAGCAtgtttggaataaaaaaatgacaacGTCACAAGCTAGCAGAATATTTGGCATACCTTATAACAGTTTATTAATGTATGTAAGAGGGAAATACGGCAAAAGTCTTAAACTTGAACAATTAAGAAGGGATTGTACGGGTGCAACTGGTGAAGTTATGAATTcacttaataataatgttaaaccTATTCAACCACCCTCGCAATTGTCACATCCACTTGCGGGTTTACCGCATCCTGATGACGGTGCATTTCCTCATCATCCGTTGCTTGGTGGAAATCTTCCGCAAGGTTTCTTTCCGGATTTTAGTGCGGCGTTTCCTGTTCCTGTGAGTATGGTTCATCTGTTACCACCGAGTGAACAAAAAGCGTTTGAGCCATCAACAAATCCGGGCAGTTTATCAGAacgtggtagtggtagtggtaatgGTGGAAGTGCTAGTGTTGGAAGTTTAAGCGGTCAtattggtggtggtggaagTGATTTGCCACCTTTAAGTCGATCACCGTCGCCagctaataataatgaacatgATGCTATACCTCAACCACCTCAATCAGCACCTGCGTTACTGCAACAAAATGGATCGGAATGA
- Protein Sequence
- MSSTAESPDGGMALQSHYSLRWNNHQTHILQAFEALLHEEILVDVTLVCSDISIRAHKVVLSACSPFFERIFAEHPCKHPVIVLKDFAGQEIAALIDFMYRGEVRVGREDLSGLMSAAESLQVRGLASSEPRPASPPDTPIETPTDLLLGDRLTPEVTRQESPIEDDIASDTTPTREPREFSSDEHRDRLPHMTHLNFSLRELRDTCNSPLMPRRKQARPRRRSGEMIPQDLSRPHPPSSLSPPSGLNLISHHQLQQLSPPNFHHQHQQAQPSQQQLQDLSINHDQNRDDIAENLSMKRSLSPCLPSEHGIKTESETASSPRGSPLTGTSLHPDGSLHDLPAASLPSMSALSLTPPHHHSEYLTSLGQLAAQWLPNHAQSQLQNPSHHPREGSPQSHNRLHPFQHPDSPLTSRRSVAVFPMDGVSPLGPGGGLFPHGGGIERGSLLADIHDSFKPEALHGLFGSANLVHHPVKKSKKHRGDSDGHRRWSDHGRGMPIGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRRDCTGATGEVMNSLNNNVKPIQPPSQLSHPLAGLPHPDDGAFPHHPLLGGNLPQGFFPDFSAAFPVPVSMVHLLPPSEQKAFEPSTNPGSLSERGSGSGNGGSASVGSLSGHIGGGGSDLPPLSRSPSPANNNEHDAIPQPPQSAPALLQQNGSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01001514; iTF_01560582; iTF_01560357; iTF_01000460; iTF_01000708; iTF_01001996; iTF_01002213; iTF_00316691; iTF_00316912; iTF_00452052; iTF_00451849; iTF_00996949; iTF_00997163; iTF_00687321; iTF_00687087; iTF_00317565; iTF_00317385; iTF_00996253; iTF_00996481;
- 90% Identity
- iTF_01001996;
- 80% Identity
- iTF_01001514;