Mcin000940.1
Basic Information
- Insect
- Meteorus cinctellus
- Gene Symbol
- lov
- Assembly
- GCA_030523045.1
- Location
- JAPYZF010000014.1:188663-191391[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-18 3.1e-15 55.5 0.0 1 44 521 564 521 565 0.96
Sequence Information
- Coding Sequence
- ATGTCGAGCACCCCGGATAGTCCCGACGGTGGCATGGCACTGCAGTCACATTACTCTCTACGATGGAACAATCATCAAGCTCACATACTCCAAGCATTTGAGGCACTGCTCCATGCTGAGATCCTCGTCGATGTCACTCTCGTGTGCTCGGACATCAGTTTACGGGCCCACAAGGTCGTTCTCAGTGCCTGCagTCCGTTCTTCGAGAGGATATTTGCTGAACACCCGTGCAAGCATCCGTTAATAGTACTCAAGGACTTTCCTGGTCGTGAAGTGGCAGCGCTAATTGACTTTATGTATCGTGGTGAAGTGCGCGTTGGACGTGAAGAACTTCCTGGATTAATGAGAGCTGCTGAAAGTTTACAGGTGAGAGGTTTAGCATCTACTGAGCCAAGACCCGCGAGTCCACCTGATACACCAATAGAAACACCAACAGATATTTTACTCGGTGACCGACTTACACCTGAAGTAACCAGACCAGAGAGTCCTATTGAGGACGATATTGCATCTGACACGACAACACCAACGAGAGATTCAAGAAGATATCTCTCAGGTGAAAATCGTGACAGATTGCCACACATGAGTCATCTAAGTTTTTCTTTACGTGAATTAAGAGAAACGTGTAATTCGCCACTAATGCCAAGAAGAAAGCAAGCGAGACCAAGAAGAAGGTCTGGTGAAATGATACCTCAAGATTTAAGTAGACCTCATCCACCACCAAGTCTAAGTCCACCAAGTGGATTAAATTTGAGTAGTCATCAACAACTACAACAATCATCACCgccaaattttcatcatcaatcacAACATCAATCCCACAACCAACATCAAATAGTTCAACAAAGTCAGCAGCAATTAcaacatttatcaataaatcatgaaCAAAATCGTGATGACATTGCAGAAAATTTATCTATGAAACGTTCAATATCACCTTGTGTACAATCTGAACATGGAATTAAAACAGAAAGTGAAGCAGCTAGTAGTCCAAGAGGTTCGCCATTAACTGGAACGAGTTTACATCCAGATGGTTCTCTACATGATGTACCAGCTGCAAGTTTACCTGCAATGTCTGCATTATCATTAACGCCACCACATCATCACAGTGAGTACCTGGCAAGTTTGGGCCAATTAGCCGCACAGTGGCTACCAAATCATCCTCAAAATCCGTCGCATCATACACGAGAGGATAGTCCACAAAGTCATAATAGAATGGTTCAATTTCAACACCAAGAACCGTCAATGACATTACGACGATCAATCGCCATTTTTCCGATGGACGGAACTTCACCAGTTGGTCCGGGTGGCGGTTTATTTCCACATGGTGGTGGTATCGATCGTGGTTCATTACTCGCTGATATTCATGACAGTTTTAAACCTGAAGCACTACATGGTTTATTTGGTAATGCTAATTTAGTGCATCATCCAgtcaaaaaatcgaaaaaacatCGAGGCGATGGTGATAGTCATAGAAGATGGTCGGATCATGGTAGAGGTATGCTAGTGAGTAGGCCTAAAGGACAACACAGTGCACCAAGAGGTGGACCACCACGATCATGGACGAATGCAGAATTGACGGAAGCATTACAACatgtttggaataaaaaaatgacaacatCACAAGCTAGCAGAATATTTGGTATACCTTATAACAGTTTATTGATGTATGTGAGAGGCAAATATGGTAAAAGTCTTAAGCTTGAACAATTGAGAAGGGATTGTACAGGTGCTACACCTGGAGAAATGAATTCActcaataataatgttaaGGCTATTCAACCACCAACACAAATATCACATCCGTTGACGATTATGCAACCTCCTGATGATGGACAATACCAACATCATCCATTGCTTGGTGGAAATTTACCGCCGGGTTTCTTTCCGGATTTCGGCGCGGCTTTTCCCGTTCCTGTGAGTATGGTACATTTATTACCACCCAGTGAACAGAAAGCAGTTGAACCGCCAACAAATCCTGGTGGTGGTACCGGTGGGGGTGGAAGTGATTTCACACCATTGAGTCGATCACCATCGCCTGCTAATAATAATCACGATGCCATACCTCAACCACCTCAATCAGCGCCTGCGTTATTACAACAAAATGGGTCCGAATGA
- Protein Sequence
- MSSTPDSPDGGMALQSHYSLRWNNHQAHILQAFEALLHAEILVDVTLVCSDISLRAHKVVLSACSPFFERIFAEHPCKHPLIVLKDFPGREVAALIDFMYRGEVRVGREELPGLMRAAESLQVRGLASTEPRPASPPDTPIETPTDILLGDRLTPEVTRPESPIEDDIASDTTTPTRDSRRYLSGENRDRLPHMSHLSFSLRELRETCNSPLMPRRKQARPRRRSGEMIPQDLSRPHPPPSLSPPSGLNLSSHQQLQQSSPPNFHHQSQHQSHNQHQIVQQSQQQLQHLSINHEQNRDDIAENLSMKRSISPCVQSEHGIKTESEAASSPRGSPLTGTSLHPDGSLHDVPAASLPAMSALSLTPPHHHSEYLASLGQLAAQWLPNHPQNPSHHTREDSPQSHNRMVQFQHQEPSMTLRRSIAIFPMDGTSPVGPGGGLFPHGGGIDRGSLLADIHDSFKPEALHGLFGNANLVHHPVKKSKKHRGDGDSHRRWSDHGRGMLVSRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRRDCTGATPGEMNSLNNNVKAIQPPTQISHPLTIMQPPDDGQYQHHPLLGGNLPPGFFPDFGAAFPVPVSMVHLLPPSEQKAVEPPTNPGGGTGGGGSDFTPLSRSPSPANNNHDAIPQPPQSAPALLQQNGSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01001173;
- 90% Identity
- iTF_00996481; iTF_01560582; iTF_01560357; iTF_00996949; iTF_00997163;
- 80% Identity
- iTF_00996481;