Mhyp004186.1
Basic Information
- Insect
- Microctonus hyperodae
- Gene Symbol
- lov
- Assembly
- GCA_030347285.1
- Location
- JAQQBR010000004.1:1768207-1770927[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-17 1.1e-14 53.5 0.0 1 44 490 533 490 534 0.96
Sequence Information
- Coding Sequence
- ATGTCGAGCACCGCGGAAAGTCCCGACGGTGAAATGGCACTGCAGTCACACTACTCGTTACGATGGAACAATCATCAAGCTCATATATTGCAAGCATTTGAAGCACTTCTTCATGCGGAGATACTCGTCGATGTCACTCTCGTGTGCTCGGACATCAGTTTACGCGCCCACAAGGTCGTTCTTAGTGCCTGcagTCCGTTTTTCGAGAGGATATTTGCGGAACATCCGTGCAAGCATCCGGTGATAGTACTCAAGGACTTTGCTGGTCAAGAAGTAGCAGCACTGATTGATTTTATGTATCGTGGTGAAGTGCGCGTTGGACGAGAAGAACTTTCTGGATTAATGAGTGCTGCAGAAAGTTTACAGGTGAGAGGTTTAGCATCTTCCGAGCCAAGGCCTGCAATTCCGAGACAAGAGAGTCCTATTGAAGACGATATTGGATCAGACACAACGCCGACAAGAGAACCAAGAGAATTTTCATCCGATGAACATCGCAATCGATTACCACATATGACACAGTTAAATTTTGCCCTTCGTGAATTAAGACATACGTGTACTTCGCCACTAATGCCAAGAAGAAAGCAAGCCAGACCGAGAAGAAGGTCTGGTGAAATGATACCTCAAGACCTAAGTAGACCTCATCCACCATCAAGTCTAAGTCCACCAAgtggattaaatttaattagtcATCAGCAATTACAACAATTATCACCGCCAAATTTTCACCATCaacaaattcaacaaaatcaaCAGCAATTACAagatttatcaatgaatattgATCAAAATCGTGATGATATTgctgaaaatttatcaatgaaacgATCATTATCGCCGTGTCTACCTTCAGAACATGGAATTAAAACGGAAAGTGAAACGGCGAGTAGTCCGAGAGGTTCACCATTAACTGGCACGAGTCTTCATCCGGATGGTTCACTCCATGATTTACCAGCGGCAAGTTTACCATCAATGTCAGCATTATCATTAACTCCGCCTCATCCTCACAGTGAGTACCTGACAAGTTTAGGCCAATTAGCAGCGCAATGGCTACCGAATCATGCACCAAGTCAGTTACAAAATCCGCCACATCATCCGCGAGAAGGTAGTCCACAAAGTCACAATAGATTACATCCCTTTCAACATCCCGAATCGCCACTAACGTCACGACGATCGGTAACGGTTTTTCCCATGGACGGTGTGTCACCACTTGGTCCGGGTCTTTTTCCCCACGGCGGTGGAATAGAACGCGGATCACTCCTTGCCGATATTCACGACAGCTTTAAACCCGAAGCCCTTCACGGATTGTTCGGTAGTGCTAATTTAGTGCATCATCCGactaaaaaatcgaaaaaacacCGAGGCGACAGCGACGGTCACAGAAGGTGGTCGGATCACGGTAGAGGGATGCCGATTGGTAGACCTAAAGGACAACACAGTGCTCCTAGAGGTGGTCCACCAAGATCGTGGACGAATGCGGAATTAACTGAGGCTTTACAGCAGGTttggaacaaaaaaatgacaacTTCACAAGCTAGCAGAATATTTGGCATACCTTATAACAGTTTACTAATGTATGTTAGAGGGAAATACGGCAAAAGTCTTAAACTTGAACAATTAAGGAGGGATTGTACGGGTGCAACTGGTGAAGTTATGAATTctcttaataataatgttaaatctATTCAACCACCCTCGCAATTGTCACATCCACTTGCGGGTTTACCGCATCCTGATGACGGTGCATTTCCCCATCATCCATTGCTCAGTGGAAATCTTCCGCAAGGTTTCTTTCCGGATTTTAGTGCGGCATTTCCGGTTCCTGTTAGTATGGTTCATCTGTTACCACCGAGTGAACAAAAAGCGTTTGAGCCAGCAGCCAATCCGGGCAGTTTATCGGAACGTGGTAGTGGTAATGGTGGAAGTGCTAGTGTTGGAAGTTTAAGCGGTCATATTGGTGCAAGTGATTTGACGCCTTTAAGTCGATCACCGTCGCCtgctaataataatgaacatgCTATACCTCAGCCACCTCAATCAGCACCGGCGTTACTACAACAAAACGGATCGGAATGA
- Protein Sequence
- MSSTAESPDGEMALQSHYSLRWNNHQAHILQAFEALLHAEILVDVTLVCSDISLRAHKVVLSACSPFFERIFAEHPCKHPVIVLKDFAGQEVAALIDFMYRGEVRVGREELSGLMSAAESLQVRGLASSEPRPAIPRQESPIEDDIGSDTTPTREPREFSSDEHRNRLPHMTQLNFALRELRHTCTSPLMPRRKQARPRRRSGEMIPQDLSRPHPPSSLSPPSGLNLISHQQLQQLSPPNFHHQQIQQNQQQLQDLSMNIDQNRDDIAENLSMKRSLSPCLPSEHGIKTESETASSPRGSPLTGTSLHPDGSLHDLPAASLPSMSALSLTPPHPHSEYLTSLGQLAAQWLPNHAPSQLQNPPHHPREGSPQSHNRLHPFQHPESPLTSRRSVTVFPMDGVSPLGPGLFPHGGGIERGSLLADIHDSFKPEALHGLFGSANLVHHPTKKSKKHRGDSDGHRRWSDHGRGMPIGRPKGQHSAPRGGPPRSWTNAELTEALQQVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRRDCTGATGEVMNSLNNNVKSIQPPSQLSHPLAGLPHPDDGAFPHHPLLSGNLPQGFFPDFSAAFPVPVSMVHLLPPSEQKAFEPAANPGSLSERGSGNGGSASVGSLSGHIGASDLTPLSRSPSPANNNEHAIPQPPQSAPALLQQNGSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01001173;
- 90% Identity
- iTF_01002213; iTF_01000460; iTF_01000708; iTF_01001173; iTF_01001514;
- 80% Identity
- iTF_01002213;