Basic Information

Insect: Meteorus colon
Gene Symbol: lov
Assembly: GCA_030523125.1
Location: JAPYZG010000905.1:33738-36457[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.6e-18 3.1e-15 55.5 0.0 1 44 520 563 520 564 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.6e-18	3.1e-15	55.5	0.0	1	44	520	563	520	564	0.96

Sequence Information

Coding Sequence: ATGTCGAGCACCCCGGATAGTCCCGACGGTGGCATGGCACTGCAGTCACATTACTCTCTACGATGGAACAATCATCAAGCTCATATACTCCAAGCATTTGAGGCACTGCTCCATGCTGAGATCCTCGTCGATGTCACTCTCGTATGCTCCGACATCAGTTTACGGGCCCACAAGGTCGTTCTCAGTGCCTGCAgTCCGTTCTTCGAGAGGATATTTGCTGAACACCCGTGCAAGCATCCGTTAATAGTACTCAAGGACTTTCCTGGTCGTGAAGTGGCAGCGCTAATTGACTTTATGTATCGTGGTGAAGTGCGTGTTGGACGTGAAGAACTTCCTGGATTAATGAGAGCTGCTGAAAGTTTACAGGTGAGAGGTTTAGCATCTACTGAACCAAGACCCGCGAGTCCACCCGACACGCCAATAGAAACACCAACAGATATTTTACTCGGTGATCGACTTACACCTGAAGTAACCAGACCAGAAAGTCCTATTGAGGACGATATTGCATCTGACACGACAACACCAACGAGAGATTCAAGAGGATATCTCTCAGGTGAAAATCGTGACAGATTGCCACACATGCGTCatctaaatttttctttacgtGAATTAAGAGAAACGTGCAATTCGCCACTAATGCCAAGAAGAAAGCAAGCGAGACCAAGAAGAAGGTCTGGTGAAATGATACCTCAAGATTTAAGTAGACCTCATCCACCACCAAGTCTAAGTCCACCAAGTGGATTAAATTTGAGTAGTCATCAACGACTACAACAATCATCAACgccaaattttcatcaatcgcAACATCAATCCCACAACCAACATCAAATAGTTCAACAGAGTCAGCAGCAATTacaacaattatcaataaatcatgaaCAAAATCGTGATGACATTgcagaaaatttatcaatgaaacgTTCAATATCACCTTGTGTACAATCTGAACATGGAATTAAAACAGAAAGTGAAGCAGCTAGTAGTCCAAGAGGTTCACCATTAACTGGAACAAGTTTGCATCCAGATGGTTCACTTCATGATGTACCAGCTGCAAGTTTACCTGCAATGTCTGCATTATCATTAACACCACCACATCATCATAGTGAGTACCTGGCGAGTTTGGGCCAATTAGCCGCACAATGGCTACCAAATCATCCTCAAAATCCGTCGCATCATACACGAGAGGATAGtccacaaaataataatagaatggTTCAATATCAACACCAAGAAACGCCATTTACATTCCGACGATCAATCGCCATTTTTCCTATCGACGGAACTTCACCAGTTGGTCCGGGTGGCAGTTTATTTACCCATGGTGGTGGTATCGATCGTACTACATTACTCCCTGATAGTCATGACAATTTTAAACCTGAAGCACTACACGGTTTATTTGGTAATACTAATTTAGTGCATCATCCAGtcaaaaaatcgaaaaaacaTCGAGGCGATGGTGATAGTCATAGAAGATGGTCGGATCATGGTAGAGGTATGCTAGTTAGTAGGCCTAAAGGACAACACAGTGCACCAAGAGGTGGACCACCACGATCATGGACGAATGCAGAATTGACAGAAGCATTACAACatgtttggaataaaaaaatgacaacaTCACAAGCTAGCAGGATATTTGGTATACCTTACAACAGTTTATTGATGTATGTGAGAGGCAAATATGGTAAAAGTCTTAAACTTGAACAATTGAGAAGGGATTGTACAGGTGCTACAGCTGGAGAAGTTATGAATTCActcaataataatgttaagGCTATTCAACCACCAACGCAAATATCACATCCGTTGTCGATTATGCAACCTCCTGATGATGGGCAATACCAACATCATCCACTACTTGGTGGAAATTTACCGCCGGGGTTCTTTCCGGATTTCGGTGCGGCTTTTCCCGTTCCTGTGAGTATGGTACATTTATTACCACCCAGTGAACAAAAAGCAATTGAACCTCCAACAAATCCTGGTGGTGGTACCGGTGGTGGTGGGAGTGATTTCACACCATTGAGTCGGTCACCATCGCCTGCTAATAATAATCACGATGCCATACCTCAACCACCTCAATCAGCGCCTGCGTTATTACAACAAAATGGGTCCGAATGA
Protein Sequence: MSSTPDSPDGGMALQSHYSLRWNNHQAHILQAFEALLHAEILVDVTLVCSDISLRAHKVVLSACSPFFERIFAEHPCKHPLIVLKDFPGREVAALIDFMYRGEVRVGREELPGLMRAAESLQVRGLASTEPRPASPPDTPIETPTDILLGDRLTPEVTRPESPIEDDIASDTTTPTRDSRGYLSGENRDRLPHMRHLNFSLRELRETCNSPLMPRRKQARPRRRSGEMIPQDLSRPHPPPSLSPPSGLNLSSHQRLQQSSTPNFHQSQHQSHNQHQIVQQSQQQLQQLSINHEQNRDDIAENLSMKRSISPCVQSEHGIKTESEAASSPRGSPLTGTSLHPDGSLHDVPAASLPAMSALSLTPPHHHSEYLASLGQLAAQWLPNHPQNPSHHTREDSPQNNNRMVQYQHQETPFTFRRSIAIFPIDGTSPVGPGGSLFTHGGGIDRTTLLPDSHDNFKPEALHGLFGNTNLVHHPVKKSKKHRGDGDSHRRWSDHGRGMLVSRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRRDCTGATAGEVMNSLNNNVKAIQPPTQISHPLSIMQPPDDGQYQHHPLLGGNLPPGFFPDFGAAFPVPVSMVHLLPPSEQKAIEPPTNPGGGTGGGGSDFTPLSRSPSPANNNHDAIPQPPQSAPALLQQNGSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01001173;
90% Identity: iTF_00996253;
80% Identity: iTF_00997163;