Mdis037726.1
Basic Information
- Insect
- Micraspis discolor
- Gene Symbol
- lrrfip2_1
- Assembly
- GCA_030674115.1
- Location
- JARTUT010002175.1:14066668-14076310[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.2e-105 3.5e-100 336.6 35.1 1 300 88 377 88 377 0.95 2 2 0.078 3.8e+03 -1.7 2.9 128 157 400 429 386 451 0.49
Sequence Information
- Coding Sequence
- ATGGAGGATTCCGGTGGATTTTCGGACGAGGATTCGGACGAACGGCTCGCGCGGGGTTCGAGAGACGGCGGTGGATCGTGCGACGCGAATGCTCGCGACCCGTCGATCGTGGTGTTGTCCGTTTCGGGCAGTCTGAACGACGATCTGGACGAGTTGGACGACGGTTCCAGGAGATCGCGAAGCTCGTATGACGGTTTCGGTGATGATGACAGCGACAATGATGATATCATCGCGCAGTTCATGGAAGCGGCAAGCGAGGAGGCTGAAGAAAGGCTGCGCGTGAAAAGGCAGGCAAGGGCCGAGGCGAGGGAGATTCGCATGAGAGAACTGGAGAGGCAACAGAAGGAGCAGGAAGAGAATGCCGACCGGCAATTTGACATGCTCGTGGAGCCGGTGGCTAGGACGGCAAGGACCAGCATCAGCAGGTATATGTCCAGCCGGCGGAGTTCCGAAGACTCCCTGGAAGACGGTGGGAGTCTTAGAGAAATCAGGCATGAGCTCAGAGAAGTAGAGGACAAGTTTAGGAAAGCTATGATAACAAATGCTCAACTCGATAACGAAAAATCCGCCCTGACCTATCAATTAGAACTACTTAAGGACAAGTTACAAGAATTAGAAGAAGAACAATCCCAGTTGAAAAGAGAACATAAGGAAAAGTGTAGAGAACACGATCAGATGAAGAGGTTATGTACCAAGCTCAAACGTGACCTTGAAGTAACAAAAGTGGAATTAGATGAAAGGGATAAACTCATTATGGAGCATGGCCTAGTGATAGTAACTGAGGAAATCGAAGAAACCAACGGTGATATTAGTATGCATAGTGTGGGTTCCCCCAAAAAGTCATTAGTGAAGGTAGAAAATGCTAAGTTGTTAGAGAATGCCGGAGATGGTACACTAGATGTTAGACTTTCAAGGTTCAtaaaagaaaaacgtgaccTTGAAGATGAAATAAACCATTTGAAATTAGAATTAGAAGAGGAAAGGAGTAAAAAAAGGAAGTCACATTCAGTCAGTAGTACCAATGGTCCAATATTAGATTACGATGCTGACGGAGAAATTCAAAAAGATGGAAGTAATTTGTTAGCTGATTATAAGTTCAAAGCGCAAAAGGCTGAACAAGACGTTGCAACTCTTCAAGCAACCGTTGCTAGGTTAGAAAGTCAAGTAGTCCGGTATAAAGCAGCCTCTGAGGCTTCAGAAAAATTGGAAGAAACATTGAAATCCGAGAAGAGGAAACTTCAAAGGGAGgCACGAGAGGCGATAAGCAGAGCAGAAGAATTAGAAACTTCAAATCTGCACTTGCTCAAACGGTTAGACAAGCTCAAAAATGCAAAGTCCACGCTTTTGAAGGAACTTTGA
- Protein Sequence
- MEDSGGFSDEDSDERLARGSRDGGGSCDANARDPSIVVLSVSGSLNDDLDELDDGSRRSRSSYDGFGDDDSDNDDIIAQFMEAASEEAEERLRVKRQARAEAREIRMRELERQQKEQEENADRQFDMLVEPVARTARTSISRYMSSRRSSEDSLEDGGSLREIRHELREVEDKFRKAMITNAQLDNEKSALTYQLELLKDKLQELEEEQSQLKREHKEKCREHDQMKRLCTKLKRDLEVTKVELDERDKLIMEHGLVIVTEEIEETNGDISMHSVGSPKKSLVKVENAKLLENAGDGTLDVRLSRFIKEKRDLEDEINHLKLELEEERSKKRKSHSVSSTNGPILDYDADGEIQKDGSNLLADYKFKAQKAEQDVATLQATVARLESQVVRYKAASEASEKLEETLKSEKRKLQREAREAISRAEELETSNLHLLKRLDKLKNAKSTLLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00646999;
- 90% Identity
- iTF_00349120;
- 80% Identity
- -