Basic Information

Gene Symbol
ct
Assembly
GCA_030674115.1
Location
JARTUT010000438.1:3849812-3867988[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.7e-27 3e-23 83.0 0.0 2 72 221 292 220 297 0.95
2 3 5e-32 4.1e-28 98.6 0.0 3 77 602 677 600 679 0.96
3 3 2.6e-30 2.1e-26 93.1 0.0 3 75 815 888 813 892 0.95

Sequence Information

Coding Sequence
ATGACGATATCAAAACTGCAGGAATCTTCGATAGCACAAATCACGAGGCTGGAGGAGCAGCTCGATCAGAAGAGGCAACACATAGCTAGGTTAGAAAACAAATTAGAATCACAGAAAGACTACGAAGAACTTAGgagagagttgagtttggTCAGGCCGGAGCTGGTGAATAACGTAGAAAATAAGGTTAGCTTAGATATTTCGGATAAGACAAAATGTGAATCACTGCCCAAAACGCCGAGTACTGAAAATGAAGATTGTCCGGATAAGGCCTCAACGCCTCTTGCGGCAGATTCGACAGAAAAAAGCACGGCATCCACACCTCAACCCTTCGAACATCCGACTCGACCACACCCTTCGCCGTCACCGATCCTCAACGGCAACCCAAAGAGTCCGGAAGACAACAACAACCATCACGTCAGTAACAACAACATCCCGTTGGCCACCATGTGCGCTGTCAATAACTTCTTCAGGGGAGACGAGCTCAAGAGGAATCCTTACGGATACGAGGAGCACAGGCCGACCTTCAGGTTCGCCGAAGACCTCGGCATGGCACCTGGGTCCATGGTGGGACGATTGGGCGAAAGCTTGATTCCGAAGGGTGATCCTATGGAGGCTAAACTGCAGGAGATGCTGCGTTACAATATGGACAAATACGCGTCACATAACCTGGATACGTTGAATATATCTAAGAGAGTAAGGGAGCTTCTGTCCATCCACAACATAGGCCAAAGACTGTTCGCCAAATATATCCTGGGGCTGTCGCAGGGCACGGTTTCCGAACTTCTGTCCAAGCCAAAGCCTTGGGATAAGTTAACGGAGAAAGGAAGAGACAGTTACAGGAAGATGCACGCGTGGGCCTGTGATGACAATGCCATAATGACCTTGAAGAGCCTGATCCCGAAGAAAGACAGTTTTTCTTCAGGCAAGGAAACAGGTATCCCAAGTTACGGTAGGCCAGAAGGCGATCTGACAGACGAACGTTTAGCACATATCCTCAATGAAGCCTCACAGTACAACCAACAGATTAAGCAAAACCCCGACGACAGCCATAGCAACGATTCCAAATCACCTCATGGCTGCTCCAGTCCTTTTTCTAGGGACCACAGCCAAAATAGACGAATGAAAAAATACGAAAACGATGATATCCCTCAAGAAAAAGTCGTAAGAATTTACCAGGAAGAACTGGTCAAACTCATGGGTAGGAGAATGGAGGACCTACGAAACCCTGCTGGTAATTTTCCTGGTATGTTTTTTCCGCAATTCCTCAGTGGTAACCCAATGGAGAGGACGCAGGAAGAGATAAGACTGGCGCTTGACGCGTACCacagagaaatagcaaaattgaaTCAAGGTCAACCACCACAGATGCCGTTAGGACTTCTCGCCCTCCAACAGCAAGCTTTGGCGCAACATCAACAAGTGCAATCGAACGGAGGCGTTCAAGACCTCTCCATTCCAAAGGACAAAATGAAACTGATGAACGGGATGGACGAAAAAGACAAGGAAGATGACAGACATTCCGGTAGTGCGTTCAGTTTAGTGAGACCAAAGATAGAACCTGGGACCCAAGCGAGTAGTAATAGCACCGCGAGTAGTCCCTTAGGTAATTCCATTTTACCTCCTGCGATGACACCGAGTGATGATTTCTCCACGTCCGCTGCCGCCAGTCCTTTGCAGCGAATGGCTTCCATCACGAATTCCCTAATATCCCAACCGCCACAGCAACCGCATCCAGCAACCAATCAAAGACCATTGAAAGCAGTACTTCCGCCAATAACTCAACAACAATTCGATCTCTACAACAATCTCAACACAGAAGAAATAGTGAAGAAAGTGAAAGAGCAACTCAGTCAATACTCAATAAGTCAAAGGCTCTTTGGAGAATCTGTTCTCGGATTGAGCCAAGGTTCCGTCAGCGATCTCTTAGCGCGACCAAAACCATGGCATATGCTGACGCAAAAGGGCAGAGAACCTTTCATCCGTATGAAGATGTTCCTTGAGGACGACAACGCTGTTCACAAGCTGGTTGCCAGTCAGTACAAAATAGCCCCCGAGAAATTGATGAGAACCGGAGGTTATGGAGGAGCTTCTTTTCCAGCTTGCGCATCCATCTCTAAACCTATGCCGCCGACGTCAAAGATGTTGAGTGAGGCAGCTGGGCTTTTGAATAAAATGCAAGAAACACAGAATCTTCTGCCTCCGAATCTACAGTTGGCGGCACAAGTGCATCCTCCTCAACCTCCACCGCCACCAATGCTACTCACACCTCCAGGTATGCCACCACATCATCCTCTGAACTTACCTACTCCAGATCATCTGAAGAAATCGACACCAAGTCCTCATGGCATCCCGCTCTCGCCGATGGGTCAACACCAACCAGCCTTGAGAAATATGCACCAGCACATGTCACCCAGTGTTTACGAAATGGCTGCACTCACGCAGGATCTGGATACACAAGTGATAACGACTAAGATCAAGGAGGCTCTTCTGGCTAACAATATAGGACAAAAGATCTTTGGGGAAGCAGTCCTTGGTCTTTCACAAGGCTCCGTCAGCGAACTCCTTTCGAAACCAAAACCTTGGCATATGCTGAGCATAAAGGGAAGAGAACCTTTCATTAGGATGCAGTTGTGGTTAAACGATGCACACAACGTAGACCGTCTTCAGGCTTTGAAGAACGAACGACGTGAAGCAAACAAACGAAGGAGATCGTCTGGGGCTGGTGCTCATGATAATAGTTCAGACACATCTTCCAACGATACTTCCGAGTTTTACCACTCCAACAGCCCAGGACCTGGACCACCATCGAGTAAGAAACAGCGAGTGTTATTCTCAGAAGAACAGAAGGAGGCGTTGAAGATCGCTTTCACCCTCGATCCATACCCAAACCTACAGACGATTGAATTCCTCGCCAGCGAATTGGGTCTGTCGAGTAGGACAATCACCAATTGGTTCCATAACCATAGGATGAGGTTAAAACAGCAAGTACCTCATGGCATGTCTTCCGATATACCTCCAAGAGAACAGACTGGAAGTCAGGTACCATTTGATCCCATCCAATTCAGACTGCTCCTAAACCAAAGATTACTCCAAATATCGAAAGAAAGGATGGGATTATCCGGTGTACCCTTGCCTTACCCCCCTTATCTCGCCGCCAACACCAACCTTGCAGCTTTGATCAGCAGAGGTTTGGACCTGTCAGCGCTCAACCATGCCGTTAAAGAACAAATGAGCGGTTTGGATCTCTCTATGACCTCCCTCAAACGAGAACCTAATGATTTCGATGACGATGAAGACGTAGAAAGCAACGTGGGTTCTGAAGACTCCAACATGTCTGACAGCATGCATGATGAGAACGTCAAAGTAGAACAAAAAGATGAGACACCCATTTCCCAAAGAGGAGGAAGGTCTTCTAGGAGGAAACCCGCGGCTCCCCAGTGGGTGAATCCAGACTGGCAGGACGAAAAAGTTAAAACAGGGGATGAAGTCATCATAAATGGCGTCTGCGTAATGCAGACGGAAGACTACGGAAGGCGGAGTTCTGAAGAAACTGTCCATGTCGAGCCTACGCCTGTCATGGACCGTTTTGACGATGACAGAAGTGATACCTCCTCCGTAAGTCAGGACAATAACGATGGAGAGGATAAACACGAATCCGGCCAAGAGAAAGAACAAGAATGTATAGAAGCACCTGAAGAACACGACAAATCTTTGAAAAAAGAAGATGAAGACGAAAGGTGGGATTATTAA
Protein Sequence
MTISKLQESSIAQITRLEEQLDQKRQHIARLENKLESQKDYEELRRELSLVRPELVNNVENKVSLDISDKTKCESLPKTPSTENEDCPDKASTPLAADSTEKSTASTPQPFEHPTRPHPSPSPILNGNPKSPEDNNNHHVSNNNIPLATMCAVNNFFRGDELKRNPYGYEEHRPTFRFAEDLGMAPGSMVGRLGESLIPKGDPMEAKLQEMLRYNMDKYASHNLDTLNISKRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAIMTLKSLIPKKDSFSSGKETGIPSYGRPEGDLTDERLAHILNEASQYNQQIKQNPDDSHSNDSKSPHGCSSPFSRDHSQNRRMKKYENDDIPQEKVVRIYQEELVKLMGRRMEDLRNPAGNFPGMFFPQFLSGNPMERTQEEIRLALDAYHREIAKLNQGQPPQMPLGLLALQQQALAQHQQVQSNGGVQDLSIPKDKMKLMNGMDEKDKEDDRHSGSAFSLVRPKIEPGTQASSNSTASSPLGNSILPPAMTPSDDFSTSAAASPLQRMASITNSLISQPPQQPHPATNQRPLKAVLPPITQQQFDLYNNLNTEEIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGASFPACASISKPMPPTSKMLSEAAGLLNKMQETQNLLPPNLQLAAQVHPPQPPPPPMLLTPPGMPPHHPLNLPTPDHLKKSTPSPHGIPLSPMGQHQPALRNMHQHMSPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNVDRLQALKNERREANKRRRSSGAGAHDNSSDTSSNDTSEFYHSNSPGPGPPSSKKQRVLFSEEQKEALKIAFTLDPYPNLQTIEFLASELGLSSRTITNWFHNHRMRLKQQVPHGMSSDIPPREQTGSQVPFDPIQFRLLLNQRLLQISKERMGLSGVPLPYPPYLAANTNLAALISRGLDLSALNHAVKEQMSGLDLSMTSLKREPNDFDDDEDVESNVGSEDSNMSDSMHDENVKVEQKDETPISQRGGRSSRRKPAAPQWVNPDWQDEKVKTGDEVIINGVCVMQTEDYGRRSSEETVHVEPTPVMDRFDDDRSDTSSVSQDNNDGEDKHESGQEKEQECIEAPEEHDKSLKKEDEDERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2