Basic Information

Gene Symbol
ct
Assembly
GCA_034642435.1
Location
CM067862.1:35836140-35857766[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.9e-27 2.6e-23 83.0 0.0 2 72 240 311 239 316 0.95
2 3 2.2e-32 3e-28 98.8 0.0 3 77 621 696 619 698 0.96
3 3 1.6e-30 2.2e-26 92.8 0.0 3 75 834 907 832 911 0.95

Sequence Information

Coding Sequence
ATGGCCGACAAGGATAAGCTAATCACGCACCTTCTAGAGGAAGTACAGAGACACCAATTAACGATAACCAAACTTCAAGAATCTTCTTTAGCACAAATTACAAGGCTCGAGGAACAGCTCGAACAGAAAAGACAACACATAGCTAGGTTAGAAAATAGATTAGACTTACAGAAGGACTACGATGATTTGAGGAGGGAGCTAAGtttggtCAGACCAGAACTGGTGAATAGTATAGAGAATAAAgtaaaattagaaaattcaGAGATGTCAAAATGTGAATCACTGCCCAAAACACCGAGTACTGAGAATGAAGATGGCCCGGAGAAGGCATCTACGCCACTGGCGGCAGATTCAACAGAGAAGAGCACAGCGTCAACTCCCCAGCCCTTAGAACACCTATCCAGACCACACCCATCACCGTCGCCTATCCTCAACGGTAACCCAAAGAGTCCAGAGGACAACAACAATCACCATGTCAGCAACAACAATATTCCCTTGGCCACCATGTGCGCAGTCAACAACTTTTTCAGAGGAGACGATCTTAAGAGAAATCCCTATGCCTACGAGGAACACAAACCTGTCTTCAGATTCGCCGAGGATCTGGGGATGGCACCCGGGTCAATGGTAGGGAGGCTAGGTGAAAGTCTCATACCCAAAGGAGACCCTATGGAGGCCAAACTTCAGGAGATGCTGAGATATAACATGGACAAATACGCCTCTCACAACCTGGACACTCTTAATATATCCAAGAGGGTGAGGGAGCTCCTTTCTATCCACAACATAGGCCAAAGACTGTTCGCCAAGTACATCTTGGGACTTTCCCAAGGGACCGTTTCGGAACTGCTTTCGAAGCCTAAACCTTGGGACAAACTGACGGAGAAGGGCAGAGACAGCTACAGGAAAATGCACGCTTGGGCCTGTGATGACAACGCCATCATGACCTTGAAGAGCCTGATCCCAAAGAAAGACAGTTTTTCCTCAGGAAAGGAGACAGGTATCCCTAATTACTGTAAACCGGAAGGAGATCTTACCGACGAAAGACTAGCTCACATCCTGAATGAAGCCTCACAGTTCAACCAACACATCAAACAGAACCCAGATGATAGTCACAGTAATGACTCTAAATCTCCCCATGGCTGTTCAAGTCCATTCTCGAGAGATCACAGCCAGAACAGAAGGATGAAAAAGTACGAAAACGACGATATACCCCAGGAAAAAGTTGTGAGGATATATCAGGAGGAGTTGGTGAAACTCATGGGGAGAAGAATGGAAGACCTACGAAACCCTGCGGGCACTTTCCCCGGTATGttttttccacaattcattagcGGCAACCCAATGGAGAGGACGCAAGAAGAAATCAGAATGGCCCTCGACGCTTACCACCGGGAGATTGCCAAACTTAACCAAGGCCATCATCCACAGATGCCCTTAGGCCTTCTTGCTCTTCAACAACAGGCATTAGCGCAGCACCAACAGGTACAATCAAACGGGGGAGTTCAAGACCTATCGATTCCGAAAGACAAGATGAAAATGATGAACGGAATGGATGAAAAGGACAAAGAAGATGACAGGCATTCCGGTAGTGCCTTTAGTTTAGTGAGACCAAAGATCGAACCTGGAACTCAAGCTAGCAGTAATAGTACTGCGAGTAGTCCTCTGGGAAACTCCATCTTACCACCAGCTATGGCTCCCAACGACGATTTCTCGACCTCTGCAGCAGCGAGTCCGTTACAACGGATGGCCTCCATCACCAATTCTCTCATCTCGCAACCACCACAGCAACCACATCCTTCCCCCAACCAAAGACCATTGAAGGCCGTACTGCCGCCAATCACTCAACAACAATTTGATCTCTACAACAACCTCAACACCGAAGACATTGTGAAGAAAGTAAAAGAACAACTCAGCCAGTATTCAATCAGCCAAAGATTATTTGGAGAGTCAGTACTTGGACTGAGTCAAGGATCTGTGAGCGACCTCTTGGCTCGACCAAAACCTTGGCATATGTTGACGCAGAAAGGAAGAGAACCATTCATCCGAATGAAGATGTTCCTGGAAGACGACAATGCAGTCCATAAATTGGTAGCAAGTCAGTACAAGATAGCCCCGGAGAAACTCATGAGAACAGGAGGATACGGAGGAGCTACTTTTCCAGCTTGCGCGTCTATCTCCAAACCGATGCCCCCAACCCCCAAGATGTTGAGCGAAGCGGCAGGTCTGCTCAATAAAATGCAGGAAACCCAGAATCTCCTCCCGCCAAGCCTACAGTTGGGTCCACAAGTACACACGCCTCAACCTCCACCACCACCGATGTTATTGACACCTCCGGGTATGCCGCCACACCACCCTTTGAACTTGCCGACACCAGACCATATTAAGAAGTCAACGCCGAGCCCACACGGCATCCCACATTCACCGATGGGTCAGCATCAGCCAGCTTTGAGGAACATGCATCAACACATGTCTCCTAGCGTGTACGAAATGGCTGCGCTTACGCAGGATTTAGACACGCAGGTGATCACCACCAAAATCAAAGAAGCCCTACTTGCCAACAACATCGGACAAAAGatatttGGTGAAGCTGTCTTGGGTCTTTCTCAGGGCTCCGTCAGTGAACTTCTCTCGAAACCAAAACCATGGCACATGCTGAGTATTAAGGGTCGGGAACCCTTTATCAGGATGCAACTGTGGCTCAACGACGCCCACAACATAGATCGCCTCCAAGCACTGAAGAACGAAAGACGCGAGGCGAACAAACGTAGACGATCTTCAGGTGCGGGAGCTCACGACAACAGTTCAGATACTTCCTCCAATGATACTTCCGAATTTTACCACTCCAATAGCCCCGGCCCTGGACCACCGTCAAGCAAGAAACAGAGAGTTCTCTTTTCGGAAGAGCAGAAGGAAGCTCTGAAAATCGCCTTCAATCTAGACCCCTACCCCAATGTTCAAACCATCGAATTCCTGGCCAGCGAGTTGGGCCTGTCAAGTAGAACGATCACGAACTGGTTCCACAACCACCGAATGCGACTAAAGCAACAAGTACCCCACGGCATGTCGTCGGACATACCGCCCAGAGAACAGACGGGTAGTCAAGTTCCGTTCGATCCCATCCAGTTCAGACTGCTCCTAAACCAAAGATTACTCCAGATTTCTAAAGAACGGATGGGATTGTCCGGTGTACCGTTGCCTTATCCTCCTTACCTGGCGGCCAACACCAATCTGGCTGCGTTGATCAGCCGGGGTTTGGACTTGTCCGCACTCAACCATGTTGTCAAAGAGCAAATGAGTGGCCTAGACCTGTCCATGTCCTCTCTCAAAAGGGAACCCAACGAGTTCGACGACGATGAAGACGTCGAAAGCAATGCGGCTTCCGAAGACTCCAACATGTCCGGCAGTATGCAAGACGAGAGCGTCAAGGTCGAGCATAAGGAGGAGTTCGAGACCCCCATCTCCCAGAGGGGGGGAAGGACGTCGCGGAGGAAACCAGCGGCGCCCCAATGGGTGAACCCCGACTGGCAAGATGAGAAGGTCAAATCCGGCGATGAGGTCATCATCAACGGAGTTTGTGTGATGCAGACTGAAGACTATGGAAGGCGGAGCTCGGAAGAGACTGTCCACGTTGAACCAACGCCTGTGATGGACCGTTTCGAAGACGATCGAAGTGACACTTCCTCCATTAGTCAAGATAATAATGAGGGAGAAGATAAACATCAGTCCGGCCAAGAGAAAGAGCAAGAGTGTACAGACGACCCACAAGAACACGACAAAATGGTTAAAAAAGAAAACGAAGACGAGAGGTGGGATTATTAA
Protein Sequence
MADKDKLITHLLEEVQRHQLTITKLQESSLAQITRLEEQLEQKRQHIARLENRLDLQKDYDDLRRELSLVRPELVNSIENKVKLENSEMSKCESLPKTPSTENEDGPEKASTPLAADSTEKSTASTPQPLEHLSRPHPSPSPILNGNPKSPEDNNNHHVSNNNIPLATMCAVNNFFRGDDLKRNPYAYEEHKPVFRFAEDLGMAPGSMVGRLGESLIPKGDPMEAKLQEMLRYNMDKYASHNLDTLNISKRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAIMTLKSLIPKKDSFSSGKETGIPNYCKPEGDLTDERLAHILNEASQFNQHIKQNPDDSHSNDSKSPHGCSSPFSRDHSQNRRMKKYENDDIPQEKVVRIYQEELVKLMGRRMEDLRNPAGTFPGMFFPQFISGNPMERTQEEIRMALDAYHREIAKLNQGHHPQMPLGLLALQQQALAQHQQVQSNGGVQDLSIPKDKMKMMNGMDEKDKEDDRHSGSAFSLVRPKIEPGTQASSNSTASSPLGNSILPPAMAPNDDFSTSAAASPLQRMASITNSLISQPPQQPHPSPNQRPLKAVLPPITQQQFDLYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGATFPACASISKPMPPTPKMLSEAAGLLNKMQETQNLLPPSLQLGPQVHTPQPPPPPMLLTPPGMPPHHPLNLPTPDHIKKSTPSPHGIPHSPMGQHQPALRNMHQHMSPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNIDRLQALKNERREANKRRRSSGAGAHDNSSDTSSNDTSEFYHSNSPGPGPPSSKKQRVLFSEEQKEALKIAFNLDPYPNVQTIEFLASELGLSSRTITNWFHNHRMRLKQQVPHGMSSDIPPREQTGSQVPFDPIQFRLLLNQRLLQISKERMGLSGVPLPYPPYLAANTNLAALISRGLDLSALNHVVKEQMSGLDLSMSSLKREPNEFDDDEDVESNAASEDSNMSGSMQDESVKVEHKEEFETPISQRGGRTSRRKPAAPQWVNPDWQDEKVKSGDEVIINGVCVMQTEDYGRRSSEETVHVEPTPVMDRFEDDRSDTSSISQDNNEGEDKHQSGQEKEQECTDDPQEHDKMVKKENEDERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00646670;
90% Identity
iTF_00998338;
80% Identity
iTF_00965009;