Basic Information

Gene Symbol
ct
Assembly
GCA_958510865.1
Location
OY294064.1:35058444-35082012[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.5e-27 2.7e-23 83.0 0.0 2 72 241 312 240 317 0.95
2 3 2.9e-32 3.1e-28 98.8 0.0 3 77 622 697 620 699 0.96
3 3 2.1e-30 2.3e-26 92.8 0.0 3 75 831 904 829 908 0.95

Sequence Information

Coding Sequence
ATGGACGCCAAGGACCAGCTAATCACACACCTTCTGGAGGAAGTACAGAGACACCAACTGACGATATCAAAACTGCAGGAGTCGTCGATCGCACAAATTACTAGACTCGAGGAACAGCTAGAACAGAAAAGACAACATATAGCTAGGTTAGAAAATAGATTAGAATTACAGAAGGACTATGAAGACTTGAGGAGGGAGTTGGGtttggtCAGACCGGAACTGGTGAATAGTAGTATAGAGAATAgagtaaatttagaaaattcGGACAAGTCAAAATGTGAATCACTGCCCAAAACACCGAGTACTGAGAATGAAGATTGCCCGGAGAAGGCATCCACGCCACTGGCGGCAGATTCAACAGAAAAAAGCACAGCATCAACTCCTCAACCCTTAGAACACCTCTCCAGGCCTCACCCTTCACCTTCGCCAATCCTCAACGGCAACCCGAAGAGTCCAGAGGACAACAATAACCACCATGTCAGCAATAACAACATCCCACTGGCCACCATGTGCGCCGTCAACAACTTCCTCAGAGGCGACGATCTGAAGAGGAACCCTTATGGATACGACGACCACAGACCTCCGTTTAGGTTCGCCGAAGACTTGGGAATGGCACCTGGTTCGATGGTGGGACGATTGGGCGAAAGCCTTATTCCCAAAGGCGACCCTATGGAGGCCAAACTCCAGGAGATGCTGCGATATAACATGGATAAATACGCTTCACACAATTTGGATACGCTCAATATATCCAAGAGGGTCAGGGAGCTCCTGTCCATCCACAACATAGGCCAAAGACTGTTTGCCAAGTACATTTTGGGGCTATCGCAAGGTACCGTCTCCGAACTGCTCTCCAAGCCGAAACCTTGGGACAAACTGACTGAAAAGGGTAGAGACAGCTACAGAAAAATGCACGCATGGGCCTGCGATGACAACGCCATCATGACCTTGAAGAGCTTGATCCCAAAGAAAGACAGTTTTTCTTCAGGAAAGGAGACAGGTATCCCTAATTACGGTAGACCCGAAGGTGATCTTACAGATGAAAGACTAGCTCATATCCTTAATGAAGCTTCACAATTCAACCAACACATCAAACAGAACCCTGATGACAGCCACAGCAACGACTCGAAATCCCCTCATGGTTGCTCAAGTCCGTTCTCTAGAGACCACAGTCAGAACAGAAGGATGAAGAAGTACGAAAATGACGATATACCACAAGAAAAAGTCGTGAGGATATACCAAGAAGAACTGGTCAAACTCATGGGTAGAAGAATGGAGGACTTACGGAACCCAGCGGGCAATTTCCCGGGTATGTTTTTTCCACAATTCCTTAGCGGCAACCCAATGGAGAGGACACAAGAAGAAATCAGGATGGCCCTCGACGCCTATCACCGGGAAATCGCCAAACTTAACCAAGGTCAACCTCCACAGATGCCACTGGGCCTTCTCGCACTCCAACAACAAGCCCTAGCGCAGCACCAACAGGTACAATCGAACGGGGGCGTTCAAGACCTTTCAATTCCGAAGGACAAGATGAAAATGATGAACGGAATGGACGATAAAGACAAGGAAGACGACAGACATTCCGGTAGTGCGTTCAGCTTAGTAAGACCAAAGATCGAACCTGGAACTCAGGCGAGCAGCAACAGCACCGCAAGCAGTCCCTTGGGTAACTCCATATTACCACCAGCTATGGCACCCAACGACGACTTCTCGACATCGGCTGCTGCGAGTCCTTTACAACGGATGGCTTCCATCACCAACTCTCTGATCTCCCAGCCACCTCAACAGCCACATCCCTCTACCAACCAAAGACCATTGAAGGCCGTTCTTCCGCCAATCACTCAACAACAATTTGATCTCTACAACAACTTGAACACCGAAGATATCGTCAAGAAAGTCAAGGAACAACTCAGTCAGTATTCAATCAGCCAGAGGCTATTCGGAGAATCAGTACTAGGACTTAGTCAAGGATCTGTTAGCGACTTGTTGGCGCGGCCCAAACCTTGGCATATGTTAACACAAAAAGGAAGAGAACCCTTCATTCGAATGAAGATGTTCTTGGAAGATGACAACGCGGTTCATAAACTGGTAGCAAGTCAGTACAAGATAGCCCCGGAGAAACTCATGAGAACCGGAGGATACGGAGGAGCTTGCACGTCCATCTCCAAACCGATGCCCCCGACCTCCAAGATGCTGAGCGAAGCAGCTGGACTGCTCAATAAAATGCAGGAAACTCAGAATCTCCTTCCACCAAGTCTTCAGTTGGGTCCACAAGTACACGCGCCTCAACCTCCACCACCACCGATGCTTCTGACACCTCCGGGTATGCCGCAACACCACCCCTTGAACCTGCCAACGCCGGACCATCTCAAAAAATCCACACCAAGCCCACACGGTATCCCTCATTCGCCGATGGGTCAGCATCCACCAACTTTGAGGAACATGCATCAACACATGTCTCCTAGCGTATACGAGATGGCAGCACTCACGCAAGATTTAGACACGCAAGTGATCACAACCAAAATCAAAGAAGCTCTGCTTGCCAACAACATCGGACAAAAGATCTTTGGAGAAGCTGTCCTGGGTCTTTCCCAAGGTTCCGTCAGCGAACTCCTCTCAAAACCCAAGCCCTGGCATATGTTGAGCATCAAAGGGCGAGAACCCTTCATAAGAATGCAATTGTGGCTCAACGACGCTCACAACATCGACCGGCTCCAAGCACTGAAGAACGAGAGACGAGAGGCTAACAAACGAAGACGATCTTCAGGAGCAGGCGCGCACGATAACAGTTCCGACACCTCCTCCAACGACACCTCGGAGTTCTACCACTCCAACAGCCCTGGACCCGGACCACCGTCCAGCAAGAAACAGAGAGTACTCTTCTCCGAAGAACAGAAGGAAGCCCTTAAAATAGCCTTCACTTTAGACCCCTACCCCAACGTTCAAACCATCGAATTCCTTGCCAGCGAGCTCGGATTGTCGAGTAGAACGATCACCAACTGGTTCCACAACCATCGGATGCGATTGAAGCAACAAGTACCCCACGGCATGTCATCGGACATACCTCCCAGAGAACAGACCGGAAGTCAAGTTCCGTTCGATCCTATCCAGTTCAGACTGCTGCTAAACCAAAGATTACTCCAGATATCTAAAGAAAGGATGGGATTGTCTGGTGTACCGTTGCCTTATCCTCCTTACCTGGCGGCCAACACCAACCTCGCAGCTTTGATCAGCCGAGGATTGGACCTGTCGGCTCTCAACCACGCCGTCAAAGAACAAATGAGCGGCTTGGATCTCTCTATGACCTCTCTAAAACGAGAACCAAACGATTATGACGACGATGAAGATGTTGAGAGCAATGTGGGTTCTGAAGACTCCAACATGTCTGGTAGCATGCAAGACGAGAGTGTCAAAGTTGAGCATAAAGAAGAGCATGAGACTCCTGTTTCCCAACGAGGTGGAAGGTCGTCGAGAAGGAAACCAGCGGCGCCCCAGTGGGTGAACCCAGACTGGCAAGACGAAAAAGTCAAGCCTGGCGACGAAGTCATCATCAACGGAGTTTGTGTGATGCAGACTGAAGACTACGGAAGGAGGAGTTCTGAAGAGACTGTCCACGTCGAACCGACACCAGTGATGGACCGTTTCGACGACGATAGAAGTGACACCTCCTCAGTTAGTCAAGACAATAACGATGGGGATGACAAACATCACCAGTCCGGCCAAGACAAAGAACAAGATTGTACAGACGATCAACAGGAGCACGACAAAACACTGAAGAAAGAAAACGAAGATGAAAGGTGGGattattga
Protein Sequence
MDAKDQLITHLLEEVQRHQLTISKLQESSIAQITRLEEQLEQKRQHIARLENRLELQKDYEDLRRELGLVRPELVNSSIENRVNLENSDKSKCESLPKTPSTENEDCPEKASTPLAADSTEKSTASTPQPLEHLSRPHPSPSPILNGNPKSPEDNNNHHVSNNNIPLATMCAVNNFLRGDDLKRNPYGYDDHRPPFRFAEDLGMAPGSMVGRLGESLIPKGDPMEAKLQEMLRYNMDKYASHNLDTLNISKRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAIMTLKSLIPKKDSFSSGKETGIPNYGRPEGDLTDERLAHILNEASQFNQHIKQNPDDSHSNDSKSPHGCSSPFSRDHSQNRRMKKYENDDIPQEKVVRIYQEELVKLMGRRMEDLRNPAGNFPGMFFPQFLSGNPMERTQEEIRMALDAYHREIAKLNQGQPPQMPLGLLALQQQALAQHQQVQSNGGVQDLSIPKDKMKMMNGMDDKDKEDDRHSGSAFSLVRPKIEPGTQASSNSTASSPLGNSILPPAMAPNDDFSTSAAASPLQRMASITNSLISQPPQQPHPSTNQRPLKAVLPPITQQQFDLYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGACTSISKPMPPTSKMLSEAAGLLNKMQETQNLLPPSLQLGPQVHAPQPPPPPMLLTPPGMPQHHPLNLPTPDHLKKSTPSPHGIPHSPMGQHPPTLRNMHQHMSPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNIDRLQALKNERREANKRRRSSGAGAHDNSSDTSSNDTSEFYHSNSPGPGPPSSKKQRVLFSEEQKEALKIAFTLDPYPNVQTIEFLASELGLSSRTITNWFHNHRMRLKQQVPHGMSSDIPPREQTGSQVPFDPIQFRLLLNQRLLQISKERMGLSGVPLPYPPYLAANTNLAALISRGLDLSALNHAVKEQMSGLDLSMTSLKREPNDYDDDEDVESNVGSEDSNMSGSMQDESVKVEHKEEHETPVSQRGGRSSRRKPAAPQWVNPDWQDEKVKPGDEVIINGVCVMQTEDYGRRSSEETVHVEPTPVMDRFDDDRSDTSSVSQDNNDGDDKHHQSGQDKEQDCTDDQQEHDKTLKKENEDERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00646670;
90% Identity
iTF_00998338;
80% Identity
iTF_01023725;