Basic Information

Gene Symbol
ct
Assembly
GCA_013387265.2
Location
JABFTP020000042.1:3596805-3622197[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.5e-27 3.8e-23 83.0 0.0 2 72 275 346 274 351 0.95
2 3 2.9e-32 4.4e-28 98.8 0.0 3 77 656 731 654 733 0.96
3 3 6.9e-31 1e-26 94.4 0.0 3 75 866 939 864 943 0.95

Sequence Information

Coding Sequence
ATGATAAATATAAGCCAATATTTCACATCTAGATGCCTCCGTAGGGTCTTTTTGCATGACGCCGATCGCGGACCTACGTCGCCGACATTCCCGCAATGCCCGAAAGCGTCGAACGCCGCGGACATCTCACAGCTTCTGGAGGAGGTTCAGAGACATCAGCTGACTATCTCGAAGCTGCAAGAATCTTCGATCGGTCAGATCACCAGGCTCGAGGAACAACTCGAGCAGAAACGACAACACATAGTTAGGTTAGAGAACAAATTGGAATCCCAAAAGGACTACGACGACCTGAAGAGAGAATTGAGTTTGGTAAGGCCGGAATTGGTCAACAGTATAGAGAATAAATTGAACGTAGACCATCTAGATAAGTCAAAATGCGAATCGTTGCCGAAGACGCCGAGTACAGAAAATGAAGACTGTCCGGAAAAGGCTCCAACGCCCATAGCAGCAGACTCTACCGAAAAAAGCACGGCATCGACGCCCCAACCCCTAGAGCATTCAACAGGACCTCACCCTTCCCCTTCACCGATCTTGAACGGTAATCCAAAGAGTCCAGAGGACAACAACAACCACCATGTCAGTAATAATAACATACCTTTGGCCACTATGTGTGCCGTCAACAACTTCTTACGAGGAGATGACAGTCTTAAAAGGAATCCCTATGGATTCGACGACCACAGACCAGCATTTCGTTTCGCTGAAGACCTTGGAATGGCACCTGGATCTATGGTTGGGCGTCTTGGTGAAAGCCTGATTCCCAAAGGTGATCCTATGGAAGCTAAACTGCAGGAGATGTTGAGGTATAATATGGACAAGTATGCTTCACACAACCTCGACACCCTTCATATTTCCAAAAGGGTTAGGGAGTTATTGTCTATTCACAACATAGGCCAAAGGCTCTTCGCCAAATACATCCTAGGATTATCGCAAGGAACAGTATCAGAGTTGCTGTCAAAGCCTAAACCTTGGGACAAACTGACGGAGAAGGGAAGAGATAGTTATAGAAAGATGCACGCATGGGCGTGTGATGAGAATGCTGTCATGTTGCTGAAGAGTTtgattccaaagaaagACAGTTTTTCTTCAGGAAAGGAGGCTGGAATTCCAAATTTCGGAAGAAGCGAAGGTGACCTAACCGACGAACGTCTGGCTCATATCCTGAACGAGGCCTCGCAATACAACCAGCACATCAAACACGAAGACAGTCGCAGCAACGACGACTCCAAATCGCCACACGGTTGTTCCAGTCCATTTTCGCGCGATCAAAGCCAGAATAGAAGActcaaaaagtacgaaaacgaCGATATTCCCCAAGAAAAAGTCGTTCGGATTTACCAAGAAGAACTTGTTAAACTTATGGGAAGGAGAATCGAAGACTTGAGAAACCCTGCAGGGAATTTTCCTGGTATGTTTTTTCCACAATTCCTCAGTGGCAACCCAATGGAAAGAACCCAAGAAGAAATCAGGCTAGCCTTAGACGCCTACCATCGAGAAATTGCCAAACTCAACCAAGGACAACCTCCTCAAATGCCTCTAGGCCTCCTAGCCCTCCAGCAACAAGCTTTAGCTCAACACCAACAAGTACAATCGAATGGAGGTGTTCAAGACCTATCCATACCCAAAGACAAGATGAAACTAGTTAATGGAATGGAAGAAAAAGATTGCAAGGAAGACGACAGACATTCTGGAAGCGCCTTTAGTCTAGTAAGACCAAAAATCGAGCCGGGTACTCAAGCGAATAGCAACAGCACCGCGAGTAGTCCCTTGGGTAACTCCATTCTCCCTCCAGCTATGACACCCAACGACGACTTTTCCACTTCAGCCGCTGCCAGTCCGTTACAGAGAATGGCTTCCATTACGAACTCCTTAATCTCGCAGCCACCTCAACAGCCTCATCATGCTTCCAACCAAAGACCCCTTAAAGCAGTTCTTCCACCAATTACTCAACAACAATTTGATCTCTACAACAATCTGAATACCGAAGATATAGTTAAGAAAGTGAAGGAACAACTGAGCCAGTATTCGATAAGTCAACGACTCTTCGGAGAATCTGTACTAGGATTAAGTCAAGGATCCGTCAGCGACCTCTTGGCAAGACCCAAACCTTGGCACATGTTGACTCAAAAAGGAAGAGAACCATTCATTAGAATGAAGATGTTCCTTGAAGACGAAAATGCAGTACACAAACTGGTTGCAAGTCAGTATAAAATTGCACCAGAAAAACTGATGAGAACAGGAGGATATGGAGGAGCATGTACGTCAATATCAAAACCAATGCCACCCACATCGAAGATGCTGAGTGAAGCTGCAGGTCTCCTGAACAAAATGCAAGAAACACAAAATCTTCTACCACCAAGTTTACAATTGGGTCCTCCTCAAGTTCATACACCACAACCTCCACCACCCCCGATGCTGTTAACGCCTCCAGGCTTAGCACCACATCATCCCATGAACTTGCCAACCCCAGATCACCTGAAAAAATCAACACCAAGCCCTCATGGAATTCCCCATTCACCCATGGGTCAACACCAAGCTTCCCTAAGGAATATGCATCAACATATGTCGCCCAGTGTGTATGAGATGGCAGCATTAACCCAAGATCTTGATACACAAACGATTACTACAAAAATTAAGGAAGCTTTACTTGCCAACAATATTGGACAAAAGATTTTTGGTGAAGCTGTGTTGGGTTTGTCGCAAGGATCAGTTAGTGAACTCCTATCAAAACCAAAGCCTTGGCACATGTTGAGCATTAAAGGTAGAGAACCTTTCATAAGGATGCAACTCTGGCTGAACGATGCTCACAATGTAGATCGCCTACAAGCCCTTAAAAACGAAAGGCGTGAAGCAAACAAACGAAGACGATCTTCGGGTGCTGGAGCACACGACAACAGCTCTGATACGTCTTCAAACGACACCTCCGAATTTTACCACTCGAACAGTCCTGGACCTGGACCACCATCCAGCAAGAAACAAAGAGTTTtgttttctgaagaacaaaaggAAGCATTGAAGATTGCTTTCACTTTGGATCCGTACCCAAACCTCCAAACAATCGAATTCCTTGCAAGCGAGTTGGGGTTATCGAGTAGAACGATAACGAATTGGTTCCACAACCACAGGATGAGGTTGAAGCAACAGGTACCTCACGGAATAGCTTCGGATATACCACCACGAGACCAAAGTGGAAGTCAGGTACCCTTCGATCCCATTCAATTTAGACTGCTTCTAAACCAAAGATTACTACAGATATCGAAAGAAAGAATGGGGTTGTCCGGTGTACCTTTACCCTACCCTCCTTACTTAGCTGCAAATACTAACCTCGCAGCGTTGATTAGTCGAGGTCTTGACTTATCAGCCTTGAACCACGCCATCAAACAAGAACAGATGAGTGGTTTAGATCTCTCAATGACATCTTTAAAACGCGAACCAAATGATTTTGACGACGACGACGATGTCGAAAGCAACGTAGGCTCAGAAGACTCCAATATGTCCGGGAGTATGCAAGACGAACGGGTCAAGATCGAGCACCAGAAAGAAGAACACGAAACGCCCATCTCCTCGAGGGGTGGAGGCTCGTCTAGGAGAAAACCTGCAGCTCCCCAGTGGGTGAATCCAGATTGGCAAGACGAAAAAGATAAAACACCACAAGGTGACGAAGTAATTATAAACGGAGTTTGCGTGATGCAAACTGAAGATTATGGACGTAGAAGTTCCGAAGAAACGGTTCATGTTGAACCAACTCCTGTTCTGGATCGATTCGACGATGATCGAAGTGACGCCTCTTCTGAGAATAACGAAGACGATGACAAACAGCAGTCCAGCCAAGATAAAGAAGAGGAGGAATGCGAGGGTGACCCTCAAAACCTAGAGAAATCGACGAAAAAAGAGAACGAGGAGGAAAGATGGGATTATTAA
Protein Sequence
MINISQYFTSRCLRRVFLHDADRGPTSPTFPQCPKASNAADISQLLEEVQRHQLTISKLQESSIGQITRLEEQLEQKRQHIVRLENKLESQKDYDDLKRELSLVRPELVNSIENKLNVDHLDKSKCESLPKTPSTENEDCPEKAPTPIAADSTEKSTASTPQPLEHSTGPHPSPSPILNGNPKSPEDNNNHHVSNNNIPLATMCAVNNFLRGDDSLKRNPYGFDDHRPAFRFAEDLGMAPGSMVGRLGESLIPKGDPMEAKLQEMLRYNMDKYASHNLDTLHISKRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAVMLLKSLIPKKDSFSSGKEAGIPNFGRSEGDLTDERLAHILNEASQYNQHIKHEDSRSNDDSKSPHGCSSPFSRDQSQNRRLKKYENDDIPQEKVVRIYQEELVKLMGRRIEDLRNPAGNFPGMFFPQFLSGNPMERTQEEIRLALDAYHREIAKLNQGQPPQMPLGLLALQQQALAQHQQVQSNGGVQDLSIPKDKMKLVNGMEEKDCKEDDRHSGSAFSLVRPKIEPGTQANSNSTASSPLGNSILPPAMTPNDDFSTSAAASPLQRMASITNSLISQPPQQPHHASNQRPLKAVLPPITQQQFDLYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGGYGGACTSISKPMPPTSKMLSEAAGLLNKMQETQNLLPPSLQLGPPQVHTPQPPPPPMLLTPPGLAPHHPMNLPTPDHLKKSTPSPHGIPHSPMGQHQASLRNMHQHMSPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNVDRLQALKNERREANKRRRSSGAGAHDNSSDTSSNDTSEFYHSNSPGPGPPSSKKQRVLFSEEQKEALKIAFTLDPYPNLQTIEFLASELGLSSRTITNWFHNHRMRLKQQVPHGIASDIPPRDQSGSQVPFDPIQFRLLLNQRLLQISKERMGLSGVPLPYPPYLAANTNLAALISRGLDLSALNHAIKQEQMSGLDLSMTSLKREPNDFDDDDDVESNVGSEDSNMSGSMQDERVKIEHQKEEHETPISSRGGGSSRRKPAAPQWVNPDWQDEKDKTPQGDEVIINGVCVMQTEDYGRRSSEETVHVEPTPVLDRFDDDRSDASSENNEDDDKQQSSQDKEEEECEGDPQNLEKSTKKENEEERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00646670;
90% Identity
iTF_00998338;
80% Identity
iTF_00394162;