Mvio017303.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Metallyticus violacea
Gene Symbol
tfip11
Assembly
GCA_030762175.1
Location
CM060834.1:48115876-48176307[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-98 4.3e-94 317.0 21.4 1 275 419 688 419 688 0.97
2 2 0.012 3.8e+02 2.3 0.0 243 272 701 730 693 733 0.84

Sequence Information

Coding Sequence
ATGGCTGAAGAGGAACTGGAGAAATTTGAAATTACAGATTATGatcttgaaaatgaatttaatattaacagacCTACACGTCGAATAACGAAAAATCAGCAGATATACGGTATATGGGCTGATGACAGTGGAGAAGAAGATGGTGGAGGTAGCAGTCGACCCAGTTTTCGTGGAGCTGGAGGAAATAAAGGAGGCAAGCATAACTACTCAGTTCCAGTCAGCTTTGTCTCAGGAGGAGTGCAGCAGGCTGGAAAAGATAAAAGTTCCggggaaaataagaaaataacagaTGAGGAGGCAGACGAAGATGATGAAGATGACGAAGCtgaaaatgagaatgaaacaAAGAGTGGCAGGAAAGGAAGGAATGAAATTGTCAATTCCTCcagtgatgaagaggaagaagaacctAGAATTTCCAGTAAGCAACACAAACTGCAACAAGATGTGATTGTGGAGGGTGAAATTGCAGGGTTGCGCAAGAAGAGGACTCCTGTAAACACTACTCTCATTCACAAAGGAATGGGTGGCTGGGAGAAGCATACTAAAGGCATTGGGGCAAAGCTTTTGCTTCAGATGGGGTTCCAACCAGGAAAAggtttgggaaaagatttacaaggaATATCAGCACCTGTAGAGGCACACCTGAGGAAAGGACGAGGTGCTATAGGTGCATATGGACCAGAGAAAGTTGCAACAATAAATGAAGCAAAGGCAGATTCAGAGGAAGAGGAAGCAAAAGATTTTGTAGAGAAGCTCTCTCATTGGAGAAAGGGTGAAGATactagcaaaaagaaaaaagtgcgCTATGTGTATAAAAGTATAGATGAAGTGCTTGAGGAAGGAAAAACTAGCAGCACCATCAAGAAAGATTACAgTCAGCTTAGCAAAGTGAAGGTTATAGATATGACAGGGCCTCAACAGAGAGTACTAAGTGGTTATCATGCAATAGCTGGACAGCAGAGGCCAGCAGATGAATGGGAGTTAAGAAAAGATAAGAAATTCTCCAACTTTGCTCTTCCAGAACTTCAACACAATCTGAACCTCCTTATGGATATGTGTGAGCAGGATATCATCCAGAATGATCGCAAGCTACGGTATACAAGTGATCAGATCGTTACCCTAGAGCAGGAAGAGGCATCCCTCTGCAAAGTGGTGGAGCAGGAGAACCATCACATTGATACTCTAGAGGCTGTTCTCAACATTGTTGAAAAGCTCATAGAACAGAGCAATGATAAGGCTGATCCATTGACCCTGGATAAGGCAGCAGAGACCTTCAAAGAACTTCAGGAAAAATACTATGAAGAATATCGCCTGTATGAACTGGGAGACCTGGCAGCAAAGCTTGTAGCACCATTATTAAGAGAAAAACTCTCTACATGGTCTCCTATAGAGAATCCTAGAGAACCACTGATGCTTTTCAAACAGTGGAAGGACATACTGGAAGGTACTCAGTCACACCTCTTGTCCAATATGGCTTCTAATGACCCATATCACAATTTAATGTGGAATTCTTGGATGCCCAGCATAAGGACAGCTGTCAACAATTGGAACTGCCGATCCTGTGAGCCAATGATAGAACTGCTGGAGTTATGGCTACCCATGGTGCCTGCATGGATCCTGGATAACATCCGTGAACAGTTAGTGCTGCCCAGAATACAACATGAAGTGGAAGAATGGAACCCTATGACAGACACTGTTCCCATACATGCCTGGATACACCCCTGGCTACCCTTATTAGGAAACCGGCTGGAAACAACTGTGTATCCTGTTATTCGTCACAAGCTGAGCAAAGCATTAGTGAACTGGCATCCATCAGATAGGTCTGCCAAATTAATGTTGCTGCCATGGCATAGGGTATTCTCAAAAGGAGACATGGATGCCTTTTTGGTGAAGAACATTGTACCCAAGTTGCAACTTGCTATGCAGGAGCTGGTCATCAATCCCCATCAGCAACATCTTGAACATTGGAACTGGGTGATGGATTGGGAAGATCTCTTGCCTTCTCACACACTGGCTGGGGTGCTGGAGAAACACTTCTTTCCAAAGTGGCTCCAGATTCTCACACTGTGGCTAAACCATGCTCCTAACTATGATGAGATCACCAACTGGTATATGGGCTGGAAGGGAATGGTATCAGAGGCCCTGCTGGCACAACCTGCCATCAAAGAGCAATTTCGTAAGGCACTAGAAATAATGAATCGTGCAGTAACTGCACCTGGACAGACCATTACACAACCTGGAGCTGTTGAGTCTGTATCATATCTTACCAATTTGGAACAATCTTCTACAAGCCAGCAGCAGTTGCCACCTTCACAGAGAGCACGAGAAACAAGATTTGAGATGATTGCAGAAGCTGTTCGAACAGCCAGTCAGATTCCACAGGGATTCAAAGAACTGGCTCAGAAACGTTGTGAAGAAAGAGGCATTGTGTTTGTACCTCTGCCCAATCGTTATCGTGAGGGCAAACAGATTTATCGCTGTGGTAAAATACAGATTTACTTTGATCGCAGCGTTCTTTTTGTGATAGAAACACAAGAGCAGGGGGCCTATAAACAATTTGGGAGACCGGCTGTGAATTTGCATGTTGCCGTGGGCAGCATGGTAGAGGAGGGTGGGTGTTGGAAAGCAGATCAGAGCAGCAAGCATCCTGCTCGACGTGGATTAAGGTGGAGTCGCCTTTAA
Protein Sequence
MAEEELEKFEITDYDLENEFNINRPTRRITKNQQIYGIWADDSGEEDGGGSSRPSFRGAGGNKGGKHNYSVPVSFVSGGVQQAGKDKSSGENKKITDEEADEDDEDDEAENENETKSGRKGRNEIVNSSSDEEEEEPRISSKQHKLQQDVIVEGEIAGLRKKRTPVNTTLIHKGMGGWEKHTKGIGAKLLLQMGFQPGKGLGKDLQGISAPVEAHLRKGRGAIGAYGPEKVATINEAKADSEEEEAKDFVEKLSHWRKGEDTSKKKKVRYVYKSIDEVLEEGKTSSTIKKDYSQLSKVKVIDMTGPQQRVLSGYHAIAGQQRPADEWELRKDKKFSNFALPELQHNLNLLMDMCEQDIIQNDRKLRYTSDQIVTLEQEEASLCKVVEQENHHIDTLEAVLNIVEKLIEQSNDKADPLTLDKAAETFKELQEKYYEEYRLYELGDLAAKLVAPLLREKLSTWSPIENPREPLMLFKQWKDILEGTQSHLLSNMASNDPYHNLMWNSWMPSIRTAVNNWNCRSCEPMIELLELWLPMVPAWILDNIREQLVLPRIQHEVEEWNPMTDTVPIHAWIHPWLPLLGNRLETTVYPVIRHKLSKALVNWHPSDRSAKLMLLPWHRVFSKGDMDAFLVKNIVPKLQLAMQELVINPHQQHLEHWNWVMDWEDLLPSHTLAGVLEKHFFPKWLQILTLWLNHAPNYDEITNWYMGWKGMVSEALLAQPAIKEQFRKALEIMNRAVTAPGQTITQPGAVESVSYLTNLEQSSTSQQQLPPSQRARETRFEMIAEAVRTASQIPQGFKELAQKRCEERGIVFVPLPNRYREGKQIYRCGKIQIYFDRSVLFVIETQEQGAYKQFGRPAVNLHVAVGSMVEEGGCWKADQSSKHPARRGLRWSRL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00821006; iTF_00955669; iTF_01410799; iTF_00434878;
90% Identity
-
80% Identity
-