Tsin047262.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tenodera sinensis
Gene Symbol
tfip11
Assembly
GCA_030765045.1
Location
CM060965.1:170804115-170867018[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.8e-98 1.3e-93 315.9 20.7 1 275 412 681 412 681 0.97
2 2 0.02 9.3e+02 1.5 0.0 243 272 694 723 686 726 0.85

Sequence Information

Coding Sequence
ATGTCTGACGAAGAAGTGGAGAAATTTGAAATAACTGACTATGATCTGGAAAATGAGTTCAACATTAACAGACCTACTCGTCGAATAACGAAGAATCAACAGATATATGGTATCTGGGCTGATGATAGTGGAGAAGAAGATGGCGGAGGTAGCAATCGACCCAGTTTTCGTGGAGCTGGTGGAACTAAGGGAGGCAAGCATAACTACTCAGCTCCAGTCAGCTTTGTCTCAGGCGGCGTCCAGCAGGCTGGAAAGGATAAAGCAACTTGCTATGGTCCCCCGTTCGACTCCGGGATGCTCCAGACCAACCCACCCCAGGGCACAACTGATGGTCGACTCAATCACACACTGCTTGCAGAACATATCACCCACGAAGAAGAAGATGCACCTAGAATTTCAAGAAGACTGCAAAATAAACTACAAGATGTGGTTGTGGAGGGGGAGATTGCAGGACTGCGTAAGAAGAGAGCTCCTGTCAACACCACTCTTATCAACAAAGGAATGGGAAGCTGGGAAAAGCATACCAAGGGCATTGGAGCAAAGCTTTTGCTTCAGATGGGTTTTCAACCAGGAAAAGGCTTGGGAAAGGACTTGCAGGGAATATCAGCACCTGTAGAAGCACATCTTCGGAAAGGACGAGGAGCTATAGGAGCGTACGGACCAGAAAAAACTGCAGTGATTCCTGATGCAAAGGCAGATTCAGAAGAAGAGGAAGCCAAAGAGTTTGTAGAGAAGTTATCCCATTGGAGAAAGGGTGGTGATGCTGGTAAAAAGAAAAAGGTGCGGTATGTTTATAAAAGCGTGGATGAGGTGCTTGAAGAAGGAAAAACTACCAGCACCATCAAGAAGGACTACAGCCAACTCAGTAAAGTGAAGGTAATAGACATGACAGGACCCCAGCAAAGGGTGTTAAGTGGTTATCATGCAATAGCTGGACAACAGAGGCCAGCAGATGAGTGGGAGCTGAGAAAGGACAAGAAATTCTCCAACTTCGCTCTTCCAGAACTTCAACATAATTTGAACCTTCTTATGGACATGTGTGAGCAGGACATTATTCAGAATGACCGCAAGCTCCGATATACAAGTGATCGGATTGTCACACTGGAACAGGAAGAGGCTTCTCTTAGCAAAGTGGTTGAGCAGGATGATCGCCACATCGAGACTCTGGAGGCTGTGCTCAACATTGTTGAGAAACTAATAGAACAGAGCGGTGATAAGACTGACCCTTTAACACTGGATAAGGCAGCTGAAACTTTCAAAGAGCTACAGGATAAATACTATGAAGAATACCGTCTATATGAACTGGGGGATCTGGCATCAAAACTTGTGGCTCCATTACTAAGAGAGAAGCTGTCTACTTGGTCACCTATAGAAAAACCTGGGGAACCAGTGATGTTATTCAAGCAGTGGAAGGACATGCTTGAAGGCACCCAGTCTCACCTCATGTCTAATATGGCCAGCAATGACCCATACCACAACTTAATGTGGAATGCATGGATGCCAAGTATTAGGACTGCAGTCAATAATTGGAACTGCCGTTCATGTGAACCAATGATAGAACTACTAGAATTGTGGCTGCCTATGGTACCTGCATGGATCCTCGATAACATCCGAGAACAGTTGGTGCTGCCCAGAATACAACACGAGGTAGAAGAGTGGAACCCAATGACAGACACAGTTCCCATACATGCTTGGATACATCCCTGGCTTCCTCTACTTGGAAACCGCTTGGAGTCTACAGTGTACCCTGTGATTCGCCACAAACTTAGCAAGGCACTAGTGAACTGGCACCCCTCAGACAGATCTGCCAAACTGATGTTACTGCCATGGCATAGAGTATTTTCTAAAGGAGATATGGATGCCTtcttagtgaaaaatattgtgcCCAAACTACAGCTAGCGATGCAAGAACTTGTCATCAACCCCCATCAACAACATCTTGAACATTGGAACTGGGTAATGGATTGGGAGGATCTACTGCCAACCCATACATTGGCAGGAGTGTTAGAGAAGCATTTCTTTCCCAAGTGGCTTCAGATCCTCACATTGTGGCTGAATCATGCTCCAAACTATGATGAAATCACTAATTGGTACATGGGCTGGAAGGGAATGGTGTCTGAGGCTTTGTTAACACAACCTGTCATTAAAGAACAATTTCGGAAAGCACTGGAAATAATGAATCGTGCGGTAACTGCTCCTGGGCAACCTATTACACAGCCTGGAGCAGTGGAATCTGTATCATACCTCACCAATTTGGAGCAGAGTTCAACCAGCCAGCAGCCACAGAGGGCACGAGAAAACAGATTTGAGGTTTTGGCAGAAGCTGTACGAACTGCTAGTCAAATTCCACAGGGATTTAAAGAACTGGTACAGAAACGCTGTGAAGAAAGAGGTATAGTGTTTGTACCACTACCTAATCGCTACAGAGAAGGAAAACAAATTTACCGTTGTGGTAAAATACAGATTTATTTTGATCGAAATGTTCTGTTTGTTAGTGAGAATGGTACAACTTGGACTCCAACTTCACTTAATTCCATGTTAGATATGGCTGCCTAA
Protein Sequence
MSDEEVEKFEITDYDLENEFNINRPTRRITKNQQIYGIWADDSGEEDGGGSNRPSFRGAGGTKGGKHNYSAPVSFVSGGVQQAGKDKATCYGPPFDSGMLQTNPPQGTTDGRLNHTLLAEHITHEEEDAPRISRRLQNKLQDVVVEGEIAGLRKKRAPVNTTLINKGMGSWEKHTKGIGAKLLLQMGFQPGKGLGKDLQGISAPVEAHLRKGRGAIGAYGPEKTAVIPDAKADSEEEEAKEFVEKLSHWRKGGDAGKKKKVRYVYKSVDEVLEEGKTTSTIKKDYSQLSKVKVIDMTGPQQRVLSGYHAIAGQQRPADEWELRKDKKFSNFALPELQHNLNLLMDMCEQDIIQNDRKLRYTSDRIVTLEQEEASLSKVVEQDDRHIETLEAVLNIVEKLIEQSGDKTDPLTLDKAAETFKELQDKYYEEYRLYELGDLASKLVAPLLREKLSTWSPIEKPGEPVMLFKQWKDMLEGTQSHLMSNMASNDPYHNLMWNAWMPSIRTAVNNWNCRSCEPMIELLELWLPMVPAWILDNIREQLVLPRIQHEVEEWNPMTDTVPIHAWIHPWLPLLGNRLESTVYPVIRHKLSKALVNWHPSDRSAKLMLLPWHRVFSKGDMDAFLVKNIVPKLQLAMQELVINPHQQHLEHWNWVMDWEDLLPTHTLAGVLEKHFFPKWLQILTLWLNHAPNYDEITNWYMGWKGMVSEALLTQPVIKEQFRKALEIMNRAVTAPGQPITQPGAVESVSYLTNLEQSSTSQQPQRARENRFEVLAEAVRTASQIPQGFKELVQKRCEERGIVFVPLPNRYREGKQIYRCGKIQIYFDRNVLFVSENGTTWTPTSLNSMLDMAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00995221;
90% Identity
-
80% Identity
-