Hcor019745.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hymenopus coronatus
Gene Symbol
tfip11
Assembly
GCA_030762935.1
Location
CM060884.1:53523806-53574197[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.8e-99 3e-94 318.4 20.2 1 275 412 681 412 681 0.97
2 2 0.044 2.8e+03 0.4 0.0 243 272 694 723 687 726 0.82

Sequence Information

Coding Sequence
ATGTCTGAGGAAGAACTGGAGAAATTTGAAATTACTGACTATGACCTCGAAAATGAGTTCAACATTAACAGACCTACCCGTCGGTTAACGAAGAATCAGCAGATATATGGTATATGGGCTGATGATAGTGGAGAAGATGATGGTGGAGGTGGAAGCCGACCCAGTTTTCGTGGAGCTGGTGGAAATAAGGCGGGCAAGCATAATTACTCAGCTCCAGTCAGCTTTGTCTCAGGTGGTGTTCAGCAGGCTGGAAAGGACAAAGGTGAagatggaaagaaaaagaaagaggacATGGAATCAGATGAggatgaagaagaaaatgaaagaaacatcagcagaaaaGGAAGAAGTGAAATAACTGCTCATTCATCCAGTGATGAAGAAGATGCACCTAGAATTTCAGGCAGACAGCAAAATAAATTACAAGATGTGGTTGTGGAAGGGGAGATTGCAGGGATGCGTAAGAAGAGAGCTCCTGTCAACACTACTCTTATGAACAAAGGAGTAGGAAGCTGGGAAAAGCATACTAAGGGCATTGGAGCAAAGCTTTTGCTTCAGATGGGATTTCAACCCGGCAAAGGTCTGGGAAAGGACTTGCAGGGAATATCAGCACCTGTAGAAGCACAAGTACGGAAAGGACGAGGTGCAATAGGAGCATATGGGCCAGAAAAAACTGCAGCAATACCTGAAGCAAAACCAGATTCAGAAGAAGAGGAAGCCAAAGAGTTTGTGGAAAAATTATCCCATTGGAGAAAAGGTGGTGATGTTAGTAAAAAGAAGAAGGTGCGCTATTTGTATAAAAGTGTGGATGAGGTGCTTGAAGAAGGAAAGACTACCACCATCAAGAAGGACTACAGCCAACTCAGTAAAGTGAAAGTAATAGATATGACAGGACCCCAGCAAAGGGTGTTAAGTGGTTATCACGCAATAGCTGGACAGCAGAGACCAGCAGACGAGTGGGAGTTGAGAAAAGACAAGAAATTCTCCAATTTTGCTCTTCCAGAACTTCAGCATAATTTGAATCTTCTTATGGACATGTGTGAGCAGGACATCATTCAGAATGACCGCAAACTTCGGTACACAAGCGATCGGATTGTCACCTTGGAACAGGAAGAAGTTTCTCTTACCAAAGTAATTGAGCAGGAGAATCGCCACATTGACACTCTAGAGGCTGTGCtcaatattgttgagaaactaATAGAACAAAGCAATGATAAGATTGACCCACTAACTCTGGATAAGGCAGCAGAGACTTTTAAGGAGCTGCAGGAAAAATATTATGAAGAATACCGTCTGTATGAACTGGGAGATCTGGCATCAAAACTTGTGGCTCCATTGCTAAGAGAGAAGCTGTCTACTTGGTCACCTATTGAAAATCCTGGAGAACCAGTGGCATTATTCAAACAATGGAAGGACATGCTGGAAGGCACTCAATCTCACCTCATGTCAAATATGGCCTCTAATGATCCATATCACAACTTGATGTGGAATGCCTGGATGCCAAGTATTAGGACTGCAGTCAACAATTGGAACTGCCGTTCCTGTGAACCAATGATAGAACTGCTGGAATTGTGGCTGCCTATGGTACCTGCATGGATCTTGGATAACATTCGAGAGCAGTTAGTGCTGCCCAGAATACAACACGAAGTAGAAGAGTGGAACCCAATGACAGATACAGTCCCCATACATGCTTGGATACATCCCTGGTTACCTCTTCTTGGTAATCGTTTGGAGTCTACAGTGTACCCTGTAATTCGGCACAAATTAAGCAAGGCATTAGTGAATTGGCACCCCTCAGACAGGTCCGCCAAGCTGATGTTGCTGCCATGGCATAGAGTATTTTCTAAAGGAGACATGGATGCTTTCTTAGTGAAAAATATTGTGCCCAAACTACAGTTAGCaatgcaggaacttgtcatcaACCCCCATCAGCAGCATCTTGAACATTGGAATTGGGTGATGGATTGGGAGGACTTATTGCCAACCCATACATTGGCAGGAGTGTTAGAGAAGCATTTCTTCCCCAAGTGGCTCCAGATTCTCACATTGTGGTTGAATCATGCTCCAAACTATGATGAAATCACTAATTGGTACATGGGCTGGAAGGGAATGGTATCTGAGGCTTTATTGACACAACCTGGCATTAAAGAACAGTTTCGGAAAGCACTGGAGATAATGAATCGTGCAGTAACTGCACCTGGGCAGCCAATGACACAGCCTGGAGCTGTGGAATCTGTGTCATATCTCACCAATCTAGAGCAAACTTCCACCAGCCAGCAGCCACAGAGGGCACGAGAAAACAGATTTGAGATTGTACAtagtccctgcctcactcctctTCTCAAACCTTTTACCTTCCATATCCCTAGCCACTTCTCCTCCTCCCCACAGATTGTATAtagtccctgcctcactcctctTCTCAAACCTTTCACCTTCCATATCCCTAGCCACTTCTCCTCCTCCCTACAGATTGGTCATAGTTCCTGCCTCACTCCTCTTCTCAAACCTTTCACCTTCCATATCCCTAGCCACTTCCTCCTCCCCACAGATTGA
Protein Sequence
MSEEELEKFEITDYDLENEFNINRPTRRLTKNQQIYGIWADDSGEDDGGGGSRPSFRGAGGNKAGKHNYSAPVSFVSGGVQQAGKDKGEDGKKKKEDMESDEDEEENERNISRKGRSEITAHSSSDEEDAPRISGRQQNKLQDVVVEGEIAGMRKKRAPVNTTLMNKGVGSWEKHTKGIGAKLLLQMGFQPGKGLGKDLQGISAPVEAQVRKGRGAIGAYGPEKTAAIPEAKPDSEEEEAKEFVEKLSHWRKGGDVSKKKKVRYLYKSVDEVLEEGKTTTIKKDYSQLSKVKVIDMTGPQQRVLSGYHAIAGQQRPADEWELRKDKKFSNFALPELQHNLNLLMDMCEQDIIQNDRKLRYTSDRIVTLEQEEVSLTKVIEQENRHIDTLEAVLNIVEKLIEQSNDKIDPLTLDKAAETFKELQEKYYEEYRLYELGDLASKLVAPLLREKLSTWSPIENPGEPVALFKQWKDMLEGTQSHLMSNMASNDPYHNLMWNAWMPSIRTAVNNWNCRSCEPMIELLELWLPMVPAWILDNIREQLVLPRIQHEVEEWNPMTDTVPIHAWIHPWLPLLGNRLESTVYPVIRHKLSKALVNWHPSDRSAKLMLLPWHRVFSKGDMDAFLVKNIVPKLQLAMQELVINPHQQHLEHWNWVMDWEDLLPTHTLAGVLEKHFFPKWLQILTLWLNHAPNYDEITNWYMGWKGMVSEALLTQPGIKEQFRKALEIMNRAVTAPGQPMTQPGAVESVSYLTNLEQTSTSQQPQRARENRFEIVHSPCLTPLLKPFTFHIPSHFSSSPQIVYSPCLTPLLKPFTFHIPSHFSSSLQIGHSSCLTPLLKPFTFHIPSHFLLPTD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00995221;
90% Identity
-
80% Identity
-