Mita003776.1
Basic Information
- Insect
- Metalampra italica
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_949699065.1
- Location
- OX452973.1:1368389-1385444[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-77 2.7e-73 247.2 20.7 1 270 130 393 130 412 0.89 2 2 1 2.2e+04 -7.3 17.7 1 48 413 459 413 486 0.70
Sequence Information
- Coding Sequence
- ATGGCCAGGCGGTCCGGGCTGACACCTGACAACAGCGACGGAGACAGCGGGGACGCGTTCACTGACGGTGATGTCTATGACACAGACGACGACACCGTCACAGAACGCGATGACAACAGGTGCCCCGTTCCAGTCAATGAAACCATCAACATGGATGTAAAGAATGATGCGGGAACAAACGGCAGCTCTAACGATAATGACTTTGACAGACATGTTAATGGTTCGAGCAATCAGCGGAAGATGAACGGCCTGAAGAACGGTGGCATTGGACATTCTAGTGACTTGATACACCATAGCAGCAGCGACAATGAGACGCCCGAACGGAGGGATTCACATACTGAGCAGAATCCTTCGATCGTTGGGATTCTGGGCGGTCAACAGAATCATGCGGAGCAGCgtctggcggcgcggcgcgcggcgcgggcggagGCGCGCGAGATACGCATGCGCGAGCTGGAGCGGCAGCAGCGCGAGCAGGAGGACCATGCCGACAAGGCGTACGACATGTACTCCGATACGGTAAGCCGGCGCGGGGGCACGCGGCTGGCGGCGCTCAGCCCGGCCGCGCTGCACTCGCCCAGGAGGAGCTCAGAGGACTCCGTCGATGACGGCTTCAGTATCAAAGACCTTAGACACGAGCTGAAGGCGGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTCGAGCTGCTCAAGGACCGCATCGAGGAGCTGCACGAGGAGTACGCGCAGCTGCAGCGGGAACACAGGGAGAAGTGCTCGGCGCACGAGCGCTTAAAGCGCGAGCACGCGTCGCTGGAGAGGGAggtggcgggcgcgcgggacgcggtgcgcgcgcgggacgcggccgccgccgccgcggggtTCGCGTTCGTGGACGCGGCgtccgccggcgccgccggggACGCCGGCGAGGGGTTCGGCGCCGTGCCGCCGCTCGCGCTCGTCTCGCACCAGTCAGAGCAGATGCTTAACGAAGCCGGGGAAGGCACGCTGGACGTGCGGTTGCAGAAGCTGATCTCGTCGAAGCAGTCGCTAGAGTCCGAGCTCCGCAAGCTGAAGCTGCAGCTGGTGGAGGAGCGCGCCGCGCGGCAGAACGGTGTCGCCAACCACCACGACATGGAGTACGAAAACGAGGtGGAGACCCTCCGCAAGTGCTGCGCGGAGGCGAAgggccgcgcggcgcgcgcggaggCGGAGGCGGCGCTGCAGGCGGCGGCCGTGGCGCGGCTCGAGGCGCAGGTGGCgaggctgcgcgcgcgccaggACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCCGGCTGCAGCGGGAGGCGAGGGAAGCTTTAAACCGAGTCGAGGAGTTGGAGACGGAGAACAGTCACCTGACGAAGCGGCTGGACAAACTGAAGAACGCCAAGTCGGCACTCCTGAAGGACCTGTGA
- Protein Sequence
- MARRSGLTPDNSDGDSGDAFTDGDVYDTDDDTVTERDDNRCPVPVNETINMDVKNDAGTNGSSNDNDFDRHVNGSSNQRKMNGLKNGGIGHSSDLIHHSSSDNETPERRDSHTEQNPSIVGILGGQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYSDTVSRRGGTRLAALSPAALHSPRRSSEDSVDDGFSIKDLRHELKAVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSAHERLKREHASLEREVAGARDAVRARDAAAAAAGFAFVDAASAGAAGDAGEGFGAVPPLALVSHQSEQMLNEAGEGTLDVRLQKLISSKQSLESELRKLKLQLVEERAARQNGVANHHDMEYENEVETLRKCCAEAKGRAARAEAEAALQAAAVARLEAQVARLRARQDHQDEHEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01401311;
- 90% Identity
- iTF_00674310;
- 80% Identity
- -