Esul016273.1
Basic Information
- Insect
- Esperia sulphurella
- Gene Symbol
- lrrfip2
- Assembly
- GCA_947086405.1
- Location
- OX352263.1:16003580-16027968[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-77 7.7e-73 245.8 21.4 1 270 129 392 129 416 0.86 2 2 1 2.5e+04 -8.2 13.0 2 144 413 459 412 487 0.40
Sequence Information
- Coding Sequence
- ATGGCCAGGCGGTCCGGGCTGACGCCGGACAATAGCGACGAAGACAGCGGCGATGCGTTCACTGATGGTGATGTCTATGACACAGACGAGGACACCATCACAGAACGCAATGACAAGTACCCCGTTCCAGTCAATGAAACCATCAACATGGATGTAAAGAATGATGCGGGAACAAACGGCAGCTCTAACGATAATGACTTTAACGGACATGTTAATGGTTCGAGGGACCAGCGCAAGATGAACGGCTTGAAGAACGGTGGAATGGGACATTCTAGTGATTTGATAAACCACAGTAGCAGCGACAATGAGGCTTCGGAACGGAGGGATTCACATTCTGAGCAGAATCCTTCGATCGTTGGGATTCTGGGCGGTCAACAGAATCATGCGGAACAGCGGCTGGCGGCGAGGCGCGCGGCGCGGGCAGAGGCCCGGGAGATACGCATGCGAGAGTTGGAGCGGCAGCAGCGCGAGCAAGAGAATCATGCCGACAAGGCGTACGACATGTACTCCGACACGGTCAGCCGGCGCGGAGGCTCCCGACTGGCTGCGCTCACTCCGGCCGTACTCCACTCGCCCAGGAGGAGCTCAGAGGACTCCGCCGACGATGGCTTCAGTATCAAAGACCTAAGGCACGATCTGAAGGAGGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAACGATAAGGCGGCGCTCGGCTACCAGCTGGAGCTGCTCAAGGACCGGATAGAGGAGCTGCACGAGGAATACGCGCAGCTGCAGCGGGAACACAGGGAGAAGTGCTCAGCGCACGAGCGTTTAAAACGCGAGCACGCGTCGCTCGAGCGGGAAGTAGCGGGCGCGCGCGACGCGGTGCGAGCGCGCGACGCGGCCGCCGCCGCCGCGGGGTACGCGTTCGTGGACGCGGCCGCGGCGGGCGCGCCCGGCGAGGCTGGCGAGGGGTTCGGCGCAGTGCCGCCGCTCGCGCTCGTCTCGCACCAGTCAGAGCAGATGCTTAACGAAGCCGGGGAAGGCACGCTAGACGTGCGGTTGCAGAAGCTGATCTCATCTAAGCAGTCGCTGGAGTCCGAGCTTCGCAAGCTGAAGTTGCAGCTGGTGGAGGAGCGCGCGGCGCGGCAGAACGGCGTCGCCAACCACCACGACATGGAGTACGAGAACGAGGTGGAGACGCTCCGCAAGTCGTGCGCGGAGGCGAAGGGCCGCGCGGCGCGCGCGGAGGCCGAGGCGGCGCTGCAGGCGGCGGGCGTGGCGCGGCTGGAGGCGCAGGTGGCGCGGCTGCGCGCGCGGCAGGACGCCCAGGACGGACACGAGGAGCAGCTCAAGCAGGAGCGGAGACGGCTGCAGAGGGAGGCGAGGGAAGCGCTGAACCGAGTCGAGGAGCTGGAGACAGAGAACAGTCACCTGACGAAGCGGCTGGACAAACTGAAGAACGCCAAGTCTGCACTCCTTAAGGAACTGTGA
- Protein Sequence
- MARRSGLTPDNSDEDSGDAFTDGDVYDTDEDTITERNDKYPVPVNETINMDVKNDAGTNGSSNDNDFNGHVNGSRDQRKMNGLKNGGMGHSSDLINHSSSDNEASERRDSHSEQNPSIVGILGGQQNHAEQRLAARRAARAEAREIRMRELERQQREQENHADKAYDMYSDTVSRRGGSRLAALTPAVLHSPRRSSEDSADDGFSIKDLRHDLKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSAHERLKREHASLEREVAGARDAVRARDAAAAAAGYAFVDAAAAGAPGEAGEGFGAVPPLALVSHQSEQMLNEAGEGTLDVRLQKLISSKQSLESELRKLKLQLVEERAARQNGVANHHDMEYENEVETLRKSCAEAKGRAARAEAEAALQAAGVARLEAQVARLRARQDAQDGHEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01401311;
- 90% Identity
- iTF_00994369;
- 80% Identity
- -