Basic Information

Gene Symbol
GATA6
Assembly
GCA_948107695.1
Location
OX403616.1:23185161-23195913[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.8e-17 1.1e-13 50.9 5.1 1 34 501 533 501 535 0.97

Sequence Information

Coding Sequence
ATGCTAAATACCGCAGACTACTGTGGAATGAAGCGCATAGTATCGTGGAAAGAAACTGCAAGGGAGCTTATAAAGAAAACGCTTAGTATCACAGGAAAAAGCATGGAAGGTcagcaacatcagcagcaacaacagcctatggaacttataacggaaattaaaacagaacccaataatgagcaagttacatcgcggacaccaacatctgaggaacagcatcagaatcaacaggaacagcaacaacaacaacaacaacagcatttgcaacaacaacatcaacaacaaattcaacaagagcatcaacaacatcagcagcagcagcaacagcagcagcagcaacaacaacaacaacaacaacagcagcagcagcagcaacaacgaaaagagagtgccctaaatgtttctagacttttgcgtggtgacctTATCGATCCCACGTCAGTACCAATTGCAAGGACACAACAGCGACGCATTCTGACAACTGCGGGAACTTTGAGAGAAGTAAATGATCCAGTGCGGGAAAACGACGCAGATTCAGATTATAACAGCCATCAACATTCACCATCGGATTTTGTACAAATGGCCCCAAGAGCCGATGAGACCTCAACTGTCTATGCTTATGAGCCCGCACCAACGTCAAACTCTTTAATTGGTTCTGAAAACCAGTCTATCAAAATCGAGTCACTAGACAAAGATCAACAACAACAATTGCAACAGCAATCCGAGCAGTCATCTTCAGCCACCTCTGCGGTTTTTGCAGAGTCAACTGTGGTATCGGCTTCCTCCTTACAAAATCACCATAGCCATCAGCATCCACAGCATCACACCACACTACGAGCCTATGAAGATGAACGGTTTGCTACTGCCATTGAACACAGTGATCACACTCAAATCATTTACTACGATCCGAACGCTCTTAACGGAGCCACTGTTGTTGAGGCCCACAATGAGTCTAAGACATTTACAAATTTGGGACCAGCTGGAGGTAGTCTTCCCCCTGGCTCGGGCACTGAATACTCAGTCACTGGGAATTACAGTCAAAACAGTCCTTACGCTGGTCTGTCCCAGACCTACAACATGGCGAACGCGAATCCGCTTCTCTATAAAACCGACCCAACGCTCAATTCAATGCGACCAAATAGCCAATTTCCCCTAACTGTTTATGAAAATCCCGGGGTCTCTGAATCTTATTGGCCAGCAACAACATCCATTGAATTTCCCAACATTAACACCTATAACCAAGTCATTACCGATGAATATGGTTCACCAAACGGCAGCCCATGGACGACATCGTCCGGATCAACCGCCACTGCCACATTCGATGCCACCGGAGTGGATTTCAAATGCCAGTATTGTGGATCTCTAATGTTGAGAAAGGAAAACGATTTGATTTGTATTACGTGTTCAGCTTCGCGAATGTCCCACATGACACGTCTGCCACCGCGCCAAACCAAACCAAAGACATCCACTCTCAACAACAATCGCAGGAATGGAGTTAGTTGCGCGAATTGCTTTACCACATCAACCACGTTGTGGCGACGCAACAACGAGAGTCAACCGGTTTGCAATGCGTGTGGATTATATTTCAAGCTGCACAACATGAATCGTCCACTAACGATGAAAAAGGAAGGCATCCAAAAGAGGAAACGCAAACCAAAACTGGCGAATGGAGCACCAATGAGGAACACCCTACCAAGTATTGTTGTGCCATCACATCATGCTATGTATCCGTCGCAGGTACAAAACCTTGGACTCTCAATGGTCTCGGCCCAGGATCTGCATGACATGTCTACCGGAGGCAGTAATGGCCAACGCATTAGCATTAGTCACGGAGACGTTAATTCAATTAATGTTTCCCGTCATCATCTACAATCGGAAGTCCCAACTTCGGTGGGAGACAATCATTCTGCGCAGTATAATTGCTGTGAGCCACCTTCACAAAGTCAATCACCGCATTTACCAAATACCAGCACTTTAAATCGTCAAATAAATCAAACAGTTCCACCATTAGATGGTGGTAGATCAGTTAATGGCGAGATTGCCACCAGCGTGATTACAAGTACTGGAATTCCTGAAAGGTCCTCGAATAATTAA
Protein Sequence
MLNTADYCGMKRIVSWKETARELIKKTLSITGKSMEGQQHQQQQQPMELITEIKTEPNNEQVTSRTPTSEEQHQNQQEQQQQQQQQHLQQQHQQQIQQEHQQHQQQQQQQQQQQQQQQQQQQQQQQRKESALNVSRLLRGDLIDPTSVPIARTQQRRILTTAGTLREVNDPVRENDADSDYNSHQHSPSDFVQMAPRADETSTVYAYEPAPTSNSLIGSENQSIKIESLDKDQQQQLQQQSEQSSSATSAVFAESTVVSASSLQNHHSHQHPQHHTTLRAYEDERFATAIEHSDHTQIIYYDPNALNGATVVEAHNESKTFTNLGPAGGSLPPGSGTEYSVTGNYSQNSPYAGLSQTYNMANANPLLYKTDPTLNSMRPNSQFPLTVYENPGVSESYWPATTSIEFPNINTYNQVITDEYGSPNGSPWTTSSGSTATATFDATGVDFKCQYCGSLMLRKENDLICITCSASRMSHMTRLPPRQTKPKTSTLNNNRRNGVSCANCFTTSTTLWRRNNESQPVCNACGLYFKLHNMNRPLTMKKEGIQKRKRKPKLANGAPMRNTLPSIVVPSHHAMYPSQVQNLGLSMVSAQDLHDMSTGGSNGQRISISHGDVNSINVSRHHLQSEVPTSVGDNHSAQYNCCEPPSQSQSPHLPNTSTLNRQINQTVPPLDGGRSVNGEIATSVITSTGIPERSSNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2