Basic Information

Gene Symbol
GATA6
Assembly
GCA_951509635.1
Location
OX608073.1:138129469-138145121[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.2e-17 2.5e-13 50.9 5.1 1 34 492 524 492 526 0.97

Sequence Information

Coding Sequence
ATGATAATAAGTCTGACGAATGTGAACTGGGCGGGGACCTATGTAGGTCCTTGTCTGGTAGATGTCTACCGAaTGGAAgcgcagcaacagcaacagcagcagcaacaccaccagcaacaacaacagcctaTTGAACTTATAACGGAAATAAAAACAGAACCAAATAATGAGCAAGTACCCTCACGAACACCAACAACTGAGGAACAGCATCAGCACCAACAggagcagcaacagcaacaacaacaacaacagcagcagcaacacttgcaacatcaacaacaacttcaacaagagcatcaacaacatcagcaacagcagcagcagcagcagcaacaacaacaacaacaacgcaaAGAACATAACACCCTTAACGTCTCTAGACTTTTGCGTAGTGACCTTATCGATCCAACGTCAGTGCCAATTGCAAGGACACAACAGCGTCGCATTCTGACAACTGCTGGAACTTTGCGTGAAGTGAATGATCCAGTGAGAGAAAACGACACTGATTCAGACTACAACAGCCACCAACACTCTCCATCGGATTTTGGACAAATGGCTCCACGAGCTGATGAACCCCCAACGGTTTATACTTACgagccaacaacaacaaaccagACTTTAATTGGCTCTGAAAATCAATCTATCAAAATCGAGTCCCTGGACAAagatcaacaacaacaattgcaACAACAATCCGACCAGCCGTCGTCGGGAAGCTCAGCGGTTTTTGGTGAATCAGCTGTTGTTTCGGCTGCATCGCTGCAAAATCACCATGGTCAGCACGCGCAGCATCACAGCACAATCCGTGTGTATGAAGATGAACGTTTTGCTGCCATTGAACATGGCGATCAAACCCAGATCATTTACAGCTACGATCCGAGCGCCTTAAATGGGGCTACTGTCGTCGACGCTCACAACGAATCAAAGACCTTCACGAATTTGGGTCCAGCTGGTGGAAGTCTTCCCACGACTTCTGGCACTGAATACTCAGTGACTGGGAATTATAGTCAGAGCAGTCCATATGCTGGTTTGTCGCAAGCCTATAACATAGCTAACGCAAATCCCCTCCTGTATAAAACCGACCCAACGCTGAATTCGATGCGACCCAATAGTCAATTTCCGCTGACGGTTTATGAAAATCCGGGTGTAACTGAATCTTATTGGCCAGCAACAACATCCATTGAATTTCCTAATATTAACACCTACAACCAGGTCATAACCGATGAATATGGCTCACCAAACGGAAGCCCCTGGACGACATCCTCCGGCGGCGgcaccaccaccgccacctTCGATACGACAGGAGTCGAATTCAAGTGCCAGTACTGTGGATCACTTATGCTAAGAAAAGACAACGATTTGATTTGTATTACATGTTCGGCGTCACGAATGTCCCACATGACACGTCTGCCACCAcgccaaaccaaaccaaagacATCCACTCTCAATAATAATCGCAGGAATGGAGTTAGTTGCGCGAATTGTTTTACCACATCGACCACGTTGTGGCGACGCAACAATGAGAGCCAACCGGTTTGTAATGCGTGTGGATTGTACTTTAAGCTGCACAACATGAATCGTCCACTAACGATGAAAAAGGAAGGCATCCAAAAGAGGAAACGCAAACCAAAGCTGGCGAATGGAACACCAATGAGGAACCCCCTACCAAGTATGGTAGTGCCATCACATCATGCAATGTATCCGTCGCAAGTTCAAAATATTGGACTCTCAATGGTCTCTGCCCAAGATCTGCATGACATGTCCACCGGTGGTGGCAGTAATGGCAATCGCATTAGCATCAGTCACGCAGATGTCAATTCGATGAATATACCACGTCATCATCTTCAATCAGATGTCCCAACATCGGTAGGAGATAACAATCATTCTGCCCAATACAATTGCTGTGAGCCTCCATCACAAAGTCAATCACCACATTTACCAAATTCCAGCACTTTAAATCGTCAGATAAATCAAACagttCCACCATTAGATGGCGGCAGATCGGTTAATGGTGAGATTGCGACCAGTGTTATAACAAGTACCGGAATTCCCGAAAGGTCCTCgaataactaa
Protein Sequence
MIISLTNVNWAGTYVGPCLVDVYRMEAQQQQQQQQHHQQQQQPIELITEIKTEPNNEQVPSRTPTTEEQHQHQQEQQQQQQQQQQQQHLQHQQQLQQEHQQHQQQQQQQQQQQQQQRKEHNTLNVSRLLRSDLIDPTSVPIARTQQRRILTTAGTLREVNDPVRENDTDSDYNSHQHSPSDFGQMAPRADEPPTVYTYEPTTTNQTLIGSENQSIKIESLDKDQQQQLQQQSDQPSSGSSAVFGESAVVSAASLQNHHGQHAQHHSTIRVYEDERFAAIEHGDQTQIIYSYDPSALNGATVVDAHNESKTFTNLGPAGGSLPTTSGTEYSVTGNYSQSSPYAGLSQAYNIANANPLLYKTDPTLNSMRPNSQFPLTVYENPGVTESYWPATTSIEFPNINTYNQVITDEYGSPNGSPWTTSSGGGTTTATFDTTGVEFKCQYCGSLMLRKDNDLICITCSASRMSHMTRLPPRQTKPKTSTLNNNRRNGVSCANCFTTSTTLWRRNNESQPVCNACGLYFKLHNMNRPLTMKKEGIQKRKRKPKLANGTPMRNPLPSMVVPSHHAMYPSQVQNIGLSMVSAQDLHDMSTGGGSNGNRISISHADVNSMNIPRHHLQSDVPTSVGDNNHSAQYNCCEPPSQSQSPHLPNSSTLNRQINQTVPPLDGGRSVNGEIATSVITSTGIPERSSNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00984686;
90% Identity
iTF_00894433;
80% Identity
-