Msca058324.1
Basic Information
- Insect
- Melanostoma scalare
- Gene Symbol
- GATA6
- Assembly
- GCA_949752695.1
- Location
- OX456986.1:147156671-147165007[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3 2.3e+04 -3.0 0.1 17 26 419 427 417 428 0.79 2 2 1.7e-17 3e-13 51.0 5.1 1 34 458 490 458 492 0.97
Sequence Information
- Coding Sequence
- ATGGATGGCGGCcagcaacatcagcagcagcagcaaaagCCTATGGAGCTGATAACTGAAATCAAAACTGAGCCAAATCATGAGCAAGTACAAGCCCGGACGCCAACAATTGAAGAGCAACATCAGCATCAAcaggaacaacaacaacaacaacagcagcagcatcaacatctgcaacaacagcatcagcaacAACTTCAACAGGAGCACCAACAgcatcagcagcagcaccagcagcaacaacaacaacaacaacagcgcaAGGAGAACACCCTTAATGTATCTAGACTTTTGCGTGGTGACCTTATCGATCCAACGTCAGTGCCAATTGTGAGAACCCAACAGCGACGTATTTTGACAACTGCTGGAACTTTGAGAGAAGTCAACGATCCCGTGCGTGAGAACGAAGCCGATTCGGAATTTAATAGCCATCAGCATTCTCCATCGGATTTTGTTCAAATGCCTCCACGAAGCGAAGAACCCACCACTGTGTACACCTACGAGTCTACTTCTACAGGCACCACTTTAATCGCATGcgaaaatcaatcaatcaaaatcGAATCCCTGGAcaaggaacaacaacaacaacagttgCAACAACAAGCCGAACAACAGCCATCGTCTGGGTCTCCTGCTGTCTATGCCGAGTCAACAGTAGTGCCAGCTTCATCCCTGCATGCCCACCATAGTCATTCGCAACACCATGCCACTTTGCGAGCCTATGACGATGAGCGCTTTACTGCGACAATTGAAAATGGTGACCAAACTCAAATCATTTACTATGACCCTAGTGGCCTCAATGGAGCAACTGTCGTCGATGCCCATAACGAGGGTAAGACATTCACAAATTTGGGTCCGGCTGGTGGTAGTCTCCCTAGCGCTGGCACCGAATACTCTGTCTCTGGCAACTACAGCCAAAACAGTCCATACACTGGCTTGACACAAACCTACATGTCCAATGCCAATCCGCTTCTATACAAAACTGATCCCACGCTAAATTCCATGCCAATGCGGCCCAACAGCCAATTCCCACTGACAGTATACGAAAATCCCAGTGTCTCTGAGTCTTATTGGCCCGGCGCAACTTCCATCGAGTTTCCCAACATTAACACCTACAACCAGGTGATGACTGACGAATATGGTTCACCAAACGGCGGTCACTGGACAACATCCTCTGGAGGCTCAGGCGCAGCAACGTTTGATCCAACAGGAGATTTAAAATGCCAGTATTGTGGAGCTCTATTGATTAGAAAGGACAACGAATACCTTTGCATTTCATGTTCGGCATCACGTATGCTAACCCGTCTGCCACCGCGTCAAACCAAACCGAAAGCAACAACTGCTAACAACAATCGAAGGAATGGTGTAAGCTGTGCAAATTGCTTCACCACATCGACCACGTTGTGGCGACGCAACAATGAGAGCCAACCGGTTTGCAATGCGTGCGGATTGTACTTTAAATTGCACAACATGAATCGTCCACTAACGATGAAAAAGGAAGGCATCCAGAAGAGGAAGCGCAAGCCGAAGCTAGCGAACGGAGCACCAATGAGGAATACCCTACCAAGTATTcttgtgccctcacatcacgcTATGTACCCTTCGCAGGTTCAAAACATTGGACTCTCAATTTCAGCACACGAGTTGCATGACATGTCAACTGGCGGGAGTAATGGCAATCGAATAAGTATCCACAGCGATGTCAATTCAATCAACGTTAGTCGACATCACCTTCAATCGGAGGTACCAACTTCGGTCGGAGATAACCATTCGTCGCCATTTAATTGCTGTGAGCCACCTTCACAGAGTCAATCGCCACATTTGCCAAACTCCAGCACTCTCAATCGTCAAATTAATCAAACAGTCCCACCGTTAGATGGCGGACGATCAAGCAATGGCGAAATTGCTACCAGCGTCATAACAAGTACTGGAATTCCTGAAAGGTCCTCGAATAACTAA
- Protein Sequence
- MDGGQQHQQQQQKPMELITEIKTEPNHEQVQARTPTIEEQHQHQQEQQQQQQQQHQHLQQQHQQQLQQEHQQHQQQHQQQQQQQQQRKENTLNVSRLLRGDLIDPTSVPIVRTQQRRILTTAGTLREVNDPVRENEADSEFNSHQHSPSDFVQMPPRSEEPTTVYTYESTSTGTTLIACENQSIKIESLDKEQQQQQLQQQAEQQPSSGSPAVYAESTVVPASSLHAHHSHSQHHATLRAYDDERFTATIENGDQTQIIYYDPSGLNGATVVDAHNEGKTFTNLGPAGGSLPSAGTEYSVSGNYSQNSPYTGLTQTYMSNANPLLYKTDPTLNSMPMRPNSQFPLTVYENPSVSESYWPGATSIEFPNINTYNQVMTDEYGSPNGGHWTTSSGGSGAATFDPTGDLKCQYCGALLIRKDNEYLCISCSASRMLTRLPPRQTKPKATTANNNRRNGVSCANCFTTSTTLWRRNNESQPVCNACGLYFKLHNMNRPLTMKKEGIQKRKRKPKLANGAPMRNTLPSILVPSHHAMYPSQVQNIGLSISAHELHDMSTGGSNGNRISIHSDVNSINVSRHHLQSEVPTSVGDNHSSPFNCCEPPSQSQSPHLPNSSTLNRQINQTVPPLDGGRSSNGEIATSVITSTGIPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00984686;
- 90% Identity
- -
- 80% Identity
- -