Basic Information

Gene Symbol
GATA6
Assembly
GCA_947049305.1
Location
CAMRIP010000126.1:1997112-2007672[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.1e-17 1.4e-13 51.0 5.1 1 34 454 486 454 488 0.97

Sequence Information

Coding Sequence
ATGGAAGGTCAGCAGCAacatcagcagcagcaacaacaacaaccacctATGGAACTTATAACAGATATAAAAACAGAACCTAGTAGTGAGCAAGTACCATCGCGAACACCAACATCTGAAGAGCAGCATCAGACCCAACaggagcagcagcagcagaatttgcaacagcaacagcaacatcaacaacaacttcAACAAGAGCATCAACaacatcagcagcagcagcaacaacaacaacggaaAGAAAACACCACCCTTAACGTTTCTAGACTTTTGCGCGGTGACCTTATCGATTCCACGTCAGTGCCAATTCCCAGGACACAACAGCGACGAATTCTGACAACAGCGGGAACTTTGCGAGAAGTCAATGATCCAGTGCGAGAAAACGAAACAGATTCAGACTATAATAGCCACCAACATTCCCCATCGGACTTTGTACAAATGGCTCCAAGACCTGATGAACCCTCAACTGTTTATACCTACGAGGCCACAACACCGAATAACTCTTTAATTGGCTCTGAAAATCAGTCTATCAAAATCGAGTCTCTAGACAAAGATCAACAGCAACAATTGCACCAGCAATCCGATCAACCATCTTCGGGCACCTCGACCGTATTTGGTGAATCGACTGCAGTGTCCGCAGCCTCGCTGCAGAATCACCACAGTCAACATTCACAGCATCACAGCACACTCCGTGCCTATGAAGAAGAACGTTTTGCTGCTTCCATTGAACATGGCGATCAAACGCAAATCATCTACTACGATACGAACGCCCTTAATGGCGCCAATGTTGTCGATGCTCACAACGAGTCTAAGACCTTTACGAATTTGGGTCCGGCTGGAGGGAGTCTTCCCGCCACCTCTGGCACCGAATATTCAGTCACTGGGAATTACAGTCAGAATAGCCCGTATGCTGGTTTGTCACAAGCCTACAACATAGCTAACGTGAACCCGCTTCTCTATAAAAGTGACCCAACGCTAAATTCGATGCGACCCAATAGCCAGTTTCCGATAACGGTGTATGAAAATCCTGGTGTCTCTGAATCCTATTGGCCAGCAACAACATCCATTGAATTTCCCAATATTAACACCTATAACCAGGTTATAACTGATGAATACGGTTCACCCAACGGTAGCCCCTGGACGACATCCTCCGGAGGCACCACCACTTCCACATTCGATACCACAGGGGTGGACTTCAAGTGCCAATACTGCGGATCCCTTATGCTAAGAAAAGAAAACGATTTGATTTGCATAACGTGTTCAGCCTCGCGGATGTCCCATATGACACGTCTGCCACCGCGCCAAACCAAACCGAAGACATCAACTCTCAACAACAATCGAAGGAATGGAGTTAGTTGCGCGAATTGTTTTACCACATCGACCACGTTGTGGCGACGAAACAATGAGAGTCAACCGGTTTGTAATGCGTGTGGATTGTACTTTAAGCTGCATAACATGAATCGTCCACTAACGATGAAAAAGGAAGGCATCCAAAAGAGGAAACGCAAACCGAAACTGGCTAATGGAGCACCAATGAGGAACACCCTACCAAgtatCGTTGTACCATCACATCATGCAATGTACCCATCACAAGTTCAAAATATTGGACTTATGGTATCGGCACAAGATCTTCATGACATGTCTACCGGAGGTAGTAATGGCAACCGCATAAGCATTAGTCACGCCGATGTCAATTCGATGAATATTTCCCGTCATCATCTTCAATCGGATGTTCCAACATCGGTAGGAGATAATCATTCCGGCCAATACAATTGCTGTGAACCACCTTCACAAAGTCAATCGCCACATTTGCCAAATACCAGCACTTTAAATCGTCAAATAAATCAAtcAGTTCCACCATTAGATGGCGGTAGATCTGTTAATGGTGAAATTGCAACCAGCGTCATAACAAGTACTGGTATCCCTGAAAGGTCCTCGAATAACTAA
Protein Sequence
MEGQQQHQQQQQQQPPMELITDIKTEPSSEQVPSRTPTSEEQHQTQQEQQQQNLQQQQQHQQQLQQEHQQHQQQQQQQQRKENTTLNVSRLLRGDLIDSTSVPIPRTQQRRILTTAGTLREVNDPVRENETDSDYNSHQHSPSDFVQMAPRPDEPSTVYTYEATTPNNSLIGSENQSIKIESLDKDQQQQLHQQSDQPSSGTSTVFGESTAVSAASLQNHHSQHSQHHSTLRAYEEERFAASIEHGDQTQIIYYDTNALNGANVVDAHNESKTFTNLGPAGGSLPATSGTEYSVTGNYSQNSPYAGLSQAYNIANVNPLLYKSDPTLNSMRPNSQFPITVYENPGVSESYWPATTSIEFPNINTYNQVITDEYGSPNGSPWTTSSGGTTTSTFDTTGVDFKCQYCGSLMLRKENDLICITCSASRMSHMTRLPPRQTKPKTSTLNNNRRNGVSCANCFTTSTTLWRRNNESQPVCNACGLYFKLHNMNRPLTMKKEGIQKRKRKPKLANGAPMRNTLPSIVVPSHHAMYPSQVQNIGLMVSAQDLHDMSTGGSNGNRISISHADVNSMNISRHHLQSDVPTSVGDNHSGQYNCCEPPSQSQSPHLPNTSTLNRQINQSVPPLDGGRSVNGEIATSVITSTGIPERSSNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00984686;
90% Identity
iTF_00894433;
80% Identity
-