Mbic021254.1
Basic Information
- Insect
- Melipona bicolor
- Gene Symbol
- bab1
- Assembly
- GCA_030673865.1
- Location
- JAHYIQ010000042.1:681340-684961[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.2e-18 1.6e-14 53.9 0.0 1 43 28 71 28 73 0.95 2 2 1.6 3.6e+03 -1.7 1.4 6 15 151 160 149 163 0.88
Sequence Information
- Coding Sequence
- ATGTGGCAGAAGTGCTGGAACACCAACCAGAGCCTGGTGCACAACCTGCGCTTTCGAGAGCGCGGCCCGCTCAAGTCCTGGCGACCGGAGACCATGGCCGAGGCGATCTTCAGCGTCCTGAAGGAAGGGCTGTCCCTGAGTCAAGCGGCAAGGAAATACGACATCCCGTACCCGACCTTCGTCTTGTATGCCAATCGAGTGCATAACATGCTGGGTCCGAGTGCCGACGGCGGAGCAGATCTTCGTCCAAAGGGCAGAGGCAGACCGCAAAGGATCCTGCTGGGTGTTTGGCCGGACGAGCACATTCGCGGTGTGATTCGGGCGGTGGTGTTCCGCGACGGGCATTCGCCGCATATGGTGAAGGAAGAGCCAACTTCGATGTACCCGAGTTTGGCAAATTACGCGGCGTGCAACGGCCCCGAAGGCGCGGTCAGCCCCGGAGCGGCAGCCGCGGCCGCGGTTGCTGCGGTCGCTCAAGGGCTGCGGCATCAGATGTGCAGCATGGTGGCGGCGGCGCACTCGCAACAGCACGACATGATGGCGACCAACCTGTCGACGAACCTGTCAGCGAACCTGTCGACCAGCCTCTCGTCGAATCTGCAGGCAGCCATGCAGGCCAGCCAGCATCAtcacaacagcaacaacagcgGGCCGGTGATCGGCAGCAACAACGGTAGCGGCGTCATGGGCGGTGGAAACAGCGGCAACTCGCCGTTGAATCTCGGCCTGGCCAGCCCGGGATCCGGCGGCCCGCCAGAGAGCCCGATGGAGAGCCCGTTGGCGAGCCCGCTCGGCCCTCTCATGGACCCTGGACACATACCCAGCAGCGTGGAGGTCGGCATCGGCGTCAGCGGCATGACGTACAAGCCCGCGCGGAGCTTCGTCAGCCCGCGGCCGGAGAATCTCTTCCAGGAGGACATCGCGGATCTCGTCAAGAGCCCCCACGGGCTCAAAGACAAGGACAAGATACCCGTCAAGCTGGAGCCGCTGACGGACTCGCGTTGCGAATAG
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGHSPHMVKEEPTSMYPSLANYAACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAHSQQHDMMATNLSTNLSANLSTSLSSNLQAAMQASQHHHNSNNSGPVIGSNNGSGVMGGGNSGNSPLNLGLASPGSGGPPESPMESPLASPLGPLMDPGHIPSSVEVGIGVSGMTYKPARSFVSPRPENLFQEDIADLVKSPHGLKDKDKIPVKLEPLTDSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00227880;
- 90% Identity
- iTF_00866625; iTF_01539521; iTF_00861795; iTF_00864557; iTF_00862480; iTF_00865234; iTF_00863870; iTF_00217668; iTF_00675940; iTF_00865924; iTF_00227880; iTF_01070952; iTF_00625417; iTF_00633549; iTF_00684718; iTF_00109743; iTF_01254710; iTF_00183862; iTF_00183205; iTF_00873719; iTF_00140504; iTF_00962424; iTF_00963777; iTF_00963107; iTF_00964387; iTF_00961743; iTF_00861050; iTF_00733885; iTF_01417622; iTF_00982208;
- 80% Identity
- -