Mrot008045.1
Basic Information
- Insect
- Megachile rotundata
- Gene Symbol
- bab1
- Assembly
- GCA_000220905.1
- Location
- NW:96530-237709[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.9e-18 6.9e-15 53.7 0.0 1 43 64 107 64 109 0.95 2 2 2.2 2.2e+03 -2.4 0.6 7 15 188 196 187 197 0.87
Sequence Information
- Coding Sequence
- ATGATTCGCGAGGAGGAAAGGGCCAAGTTGTTGGAGTCGTCCCACGCTTGGCTCGGAGCCTCCACGTCGAGTATAGCAGCAGACAGCTACCAGTATCAGTTGCAGTCCATGTGGCAAAAGTGTTGGAACACCAATCAGAGTCTGGTGCACAATCTGCGCTTCCGGGAGCGTGGGCCGCTCAAGTCTTGGCGGCCGGAAACCATGGCGGAAGCGATCTTCAGCGTCCTGAAGGAAGGATTGTCCTTGAGTCAAGCCGCGCGGAAATACGACATCCCATACCCGACGTTCGTTCTGTACGCCAATCGAGTTCACAATATGCTGGGACCTAGCGCGGATGGCGGCGCCGATCTACGCCCGAAAGGCAGAGGCAGACCGCAAAGGATTCTGTTGGGCGTGTGGCCGGACGAGCATATTCGCGGAGTGATTCGGGCCGTGGTGTTCCGCGATGGCCACTCTCCGCACATGGTGAAGGAAGAGACGACCTCGATGTATCCGAGTCTGGCGAATTACGCTGCCTGTAACGGACCCGAAGGCGCGGTCAGCCCTGGAGCGGCAGCNNNGGCTGCGGTTGCCGCGGTGGCACAAGGTCTACGACATCAAATGTGCAGCATGGTAGCGGCGGCGCATTCGCAACAACACGACATGATGGCGACTAATCTTTCGACGAACCTGTCGACGAGCCTCTCGTCGAACCTCCAAGCAGCGATGCAGGCCAGTCAGCATCATCACAACAACACCAATAGCGGCGCGGCCGGTATCGGCAGCAACAACGGTGGCGGTAGCGGTGGCGGTGGACTTGGCGGGAACAACGGAAACTCGCCCCTAAATCTGGGATTGTCGAGTCCAGGATCCGGTGGCCCGCCGGAGAGTCCGATGGAGAGTCCCCTGGCGAGTCCACTCGGTTCCCTGATGGACCCTAGCCACATACCTAGCAGCGTGGAAGTCGGTATCGGTGTCAGCGGAATGACCTACAAGCCAGCGCGGAGCTTCGTCAGTCCGCGACCGGAGAATCTCTTCCAAGAGGACATCGCGGATCTGGTGAAAGGTCCCCACGGGCTCAAGGACAAGGACAAGATCCCTGTTAAACTGGAGCCCCTAACGGACTCTCGTTGCGAATAG
- Protein Sequence
- MIREEERAKLLESSHAWLGASTSSIAADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGHSPHMVKEETTSMYPSLANYAACNGPEGAVSPGAAAXAAVAAVAQGLRHQMCSMVAAAHSQQHDMMATNLSTNLSTSLSSNLQAAMQASQHHHNNTNSGAAGIGSNNGGGSGGGGLGGNNGNSPLNLGLSSPGSGGPPESPMESPLASPLGSLMDPSHIPSSVEVGIGVSGMTYKPARSFVSPRPENLFQEDIADLVKGPHGLKDKDKIPVKLEPLTDSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01015716;
- 90% Identity
- iTF_00982886;
- 80% Identity
- -