Mror005602.1
Basic Information
- Insect
- Melanophora roralis
- Gene Symbol
- Paxbp1
- Assembly
- GCA_963583895.1
- Location
- OY757187.1:99032629-99039574[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-29 2.1e-25 90.9 0.5 2 272 636 845 635 847 0.95
Sequence Information
- Coding Sequence
- ATGTCACTGTTTCgtaaacccaaaaaaatacaaagaagaaTATTTTCAAGTACTTTGGATGAAGATGACGACGCCGCCACGGCTAGCGGTTTTGCATCCGCAAGGAATGTTCCAATGGATGTAGATGACTGCAGAGATCTTATAGCACCACCACCGCCACAAATTTCCTCAAAATCAGATAAAAATCGGAAGAGCAAAGACACTAAATCAAAACCATCAAGTAAAAAAGAGGGAGGAGTAGGCGCAGACTTGGGAAAATCTAAGGCTTTACTAAGTTTCGCAGATGAAGatGAAGATGCCGAGGTCTTTCAAGTACGAAAATCGTCTCACAGCAAAAAAGTTATGCGAATGTTGGACAAGGAACGCCGACGCAAAAAGAAGGAAGAGCGTAGTAGTTCGGATAATATCAGCAACAGTAGCACTATAAACACCGCTGTCACTTCGCATCACAGTAGTCACCATAATAGGGAACGTGAAAATGGTTCTCGTAATAATAATTCTCATAATTTAGGTTCATCTTCGACGTCAAAATATACATCTAGTTCTTCGGAACAtagtaaaagtaataaaagtgATAAAATCCAAACAGAAATACGCACAGACGACTTTGTGCTGGTAGTAAAAAAATCAGAACCGGATATGATCTTAAATGGTCGTGCCGCCTTATGTGCTGGACGCAATGATATGACTGATGAAGAAGAAGAGCAAAGTGATAGTGAACGCAACGGCAGCAAGCACAGGTTTTCAAAACCAGATCACTTAAAACAAATGCTAGAAAGTGGTTCCATTCCGGATGCAGCAATGATACACGCAGCCCGAAAGAGACGACAAAAGGCTCGGGAACAAGgtGACTTCATAGCCACAGAGGAACCAAAAGCGGAAGCAAAGAAGGGCAACCGTTTGGCCAGAGAAGACATAGAGGATGATAATTCAGAGGATGAAGAACGTGTTGACATGAATGCTATAACCGGCATAAAGGAGCGCGAAGAAAGACGTGAAAAATTTTATGCTGTTGAAAAAGActatTCAGAAGCAGACTCGGACTGTGAAACTTACGAATGGGAAAATCAACAAATACGCAAGGGTGTAACAGGTGCTCAACTGGTTAATGCTCAACATGAATCGGTTTTATCACGATTCATGATTAAGTCAAATATGGAAAATGCTTTAGAAGCGCCACCGCAACCCGAATCTACATCGTCGCTTCTCCAGCAAGCGTATGCTAAATGTAATTTAGAAAAGCCacagcaaattttaaatgccaataaaccgaaaaaggaaaaaattaaagcaactgCTTTAAGAACTCCCCAAGAAATTCGCAAGACTATAGAAGAACGTTTAAGTAAACTTAAAGAACTAAACAAAAACCACTTGGAAGATATCGAAAGAATTGGTAAGGAAATGCAAGCAATGAAGTTAGAAGAAATGGATTGTGCACAAAAAGCTCCAACTGCAGCAGCAAAATATCGATTTTATCAAGAAATTAGGTGCTATGTTACTGATTTGATTGATTGTCTCAATGAAAAGTCGTCCTTAATTGTGGATCTGGAAAAACGTTGCCTTCAATTTTTTGGCAAACATCAGCACTTTTTAATCGAAAGACGAAGGCAGGATGTACGTGATCAAGCTAAAGAAATGGCCGAGGCTGCtaAACCCTCTTCAGTTCGTCGTGGAGAGGAATATGACGAACAGGTACGCCGTGCTGCTGAACGTGAGGGCAGACGTACTAGACGTCGTTGTGAGCGTGAACGTCAGGATTTATTAGGTTCTCATTTAGATGGCATGTCTTCGGATGAAGAAACCTCTGATCGCTATCAAGAACTTTTTCAAGAAGAATTGGaaaaacttattAAAGAGGGTTCAACCGTCATGGAAGATGTAACCGATGAATTTAGTAAAGTTGAAatgattttaactaaattttatgcCTGGCGTAGAACTGATATGCCTTCGTATAAAGATGCTTTCGTCAGTATATGTCTGCCTAAGatACTTGGCCCTTTGTTACGACTTGAAATGTTGACATGGTCACCACTATTGGCTGATTTTAAAGATATCGAAAAGCTCAATTGGTATTCAGCAGTCATGCTGTATGCATGGAGTGAAGATGAAACAGAAGAATCACTCAAACAAGATCATGATGTTAACTTTGTGCCAACTTTGTTGGAGAAAATTATAATACCCAAGTTAAAAGaTATTGTAACACATTGTTGGGATCCCCTATCAACTACACAAACATTACGTTTAATTGGTTTCATAAATCGTATGGGTAGAGATTATCCTCTAAAAGGTGACTGTAAAACATTGCAACAATTGTTTAATgccattttggaaaaaatgaaattggcCCTTGAAAATGATGTTTTTATACCCATATTTCCAAAGCAGGTGCAAGAAAACAAGACTTCATTCTTTCAGCGTCAATTTTGCAGTGGCTTAAAACTATTTCGCAACTTTTTATCATGGCAGGGCATTATAGCTGATACACCTCTAAGAGAAATGGCAATAGGATCTCTTCTTAATCGTTATTTGTTGCTAGCAATGAGGGTTTGCACTGCTAACGATGCTATAAGCAAAGCTTATATTATTGTTAATACTTTACCTACAGCCTGGTTGCAACCGGATTcagaatgtttaaaaaatttacaacaatttatAACATATATTAAACAGACTATAGAATCATGTGATGCTAATAAtcctttatttatGCAAACTAGTGATAAGGCCAAACAAATCTTATTAAGGCTtcacatttaa
- Protein Sequence
- MSLFRKPKKIQRRIFSSTLDEDDDAATASGFASARNVPMDVDDCRDLIAPPPPQISSKSDKNRKSKDTKSKPSSKKEGGVGADLGKSKALLSFADEDEDAEVFQVRKSSHSKKVMRMLDKERRRKKKEERSSSDNISNSSTINTAVTSHHSSHHNRERENGSRNNNSHNLGSSSTSKYTSSSSEHSKSNKSDKIQTEIRTDDFVLVVKKSEPDMILNGRAALCAGRNDMTDEEEEQSDSERNGSKHRFSKPDHLKQMLESGSIPDAAMIHAARKRRQKAREQGDFIATEEPKAEAKKGNRLAREDIEDDNSEDEERVDMNAITGIKEREERREKFYAVEKDYSEADSDCETYEWENQQIRKGVTGAQLVNAQHESVLSRFMIKSNMENALEAPPQPESTSSLLQQAYAKCNLEKPQQILNANKPKKEKIKATALRTPQEIRKTIEERLSKLKELNKNHLEDIERIGKEMQAMKLEEMDCAQKAPTAAAKYRFYQEIRCYVTDLIDCLNEKSSLIVDLEKRCLQFFGKHQHFLIERRRQDVRDQAKEMAEAAKPSSVRRGEEYDEQVRRAAEREGRRTRRRCERERQDLLGSHLDGMSSDEETSDRYQELFQEELEKLIKEGSTVMEDVTDEFSKVEMILTKFYAWRRTDMPSYKDAFVSICLPKILGPLLRLEMLTWSPLLADFKDIEKLNWYSAVMLYAWSEDETEESLKQDHDVNFVPTLLEKIIIPKLKDIVTHCWDPLSTTQTLRLIGFINRMGRDYPLKGDCKTLQQLFNAILEKMKLALENDVFIPIFPKQVQENKTSFFQRQFCSGLKLFRNFLSWQGIIADTPLREMAIGSLLNRYLLLAMRVCTANDAISKAYIIVNTLPTAWLQPDSECLKNLQQFITYIKQTIESCDANNPLFMQTSDKAKQILLRLHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01162246; iTF_00716705; iTF_01201604; iTF_00371026; iTF_00921427; iTF_00922098; iTF_01165524; iTF_01236670; iTF_01235729; iTF_00892749; iTF_00900579; iTF_00899573; iTF_01259204; iTF_01427472; iTF_01138005; iTF_00741870; iTF_00760087; iTF_01374073; iTF_01376633; iTF_00655314; iTF_00331515; iTF_01314673; iTF_01313001; iTF_01315497; iTF_01313802; iTF_01109333; iTF_01174249; iTF_01397427; iTF_01074471; iTF_01398480; iTF_01399448; iTF_00435546; iTF_00258874; iTF_00199873; iTF_01194408; iTF_01261000; iTF_00259763; iTF_01237651; iTF_00045343; iTF_01176926;
- 90% Identity
- -
- 80% Identity
- -