Basic Information

Insect: Linnaemya vulpina
Gene Symbol: PAXBP1
Assembly: GCA_963675445.1
Location: OY776277.1:111922264-111928431[+]

Transcription Factor Domain

TF Family: GCFC
Domain: GCFC domain
PFAM: PF07842
TF Group: Unclassified Structure
Description: This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.9e-29 4.1e-25 90.2 1.3 3 272 645 853 643 855 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.9e-29	4.1e-25	90.2	1.3	3	272	645	853	643	855	0.95

Sequence Information

Coding Sequence: ATGTCACTTTTTCGCAAGCCTAAGAAAATACAGAGAAGGGCATTTTCAAGCGCATTGGATGAAGATGATGACACTAACGGTAGTGGTGCAACTGGCAAAGATTCGCGAAGATCTATTGATAGGCAAATGGATGTAGATAATAATGATGATCTTATTCCACCGCCTCCACCACAAATATCTGGAAGATCTGAGAAAAAGAAGAGTAAGGAAAGTAAAGGAAAATCTTCGGCGATTAAAAAAGAAGTGGGTGGTGGTGTTGGAGACTGTGGTAAATCCAAGGCTCTACTTAGTTTTGCAGATGAAGAAGAAGATGCTGAAATCTTCCAAGTTCGTAAATCATCACACAGCAAAAAAGTTATGCGTATGTTAGACAAGGAAAGAAGACGTAAAAAGAAGGAAGAACGTGGTATAGATAACAATTTCAGCACTAGCAGCACCAGTACCAGCAACTATAGTAACAATGGCACCCATTCTCTTAACCATCATAATAGGGAACGTGAAAATGGTTCACGTAATAATAGTTCTCATAATTTAGGTTCATCTTCGACGTCGGCACATACAACTAGTTCTTCGGAACAtagtaaaagtaataaaagtgATAAAATCCAAACTGAAATACGCACAGACGACTTTGTGCTTGTGGTGAAAAAATCAGAACCAGATATTGTATTAAATGGTCGGGCTGCTTTATGTGCTGGACGCAATGATATATCTGATGAGGATGTAGAACAAAGTGACTCTGAGCGTAGTGAAAGCAAGCATCGATTTTCAAAACCGGATCATTTGAAACAAATGTTGGAAAGTGGCTCCATACCAGATGCCGCCATGATACATGCTGCTCGAAAAAGAAGGCAAAAGGCCAGAGAGCAAGGGGACTTTATAGTCATAGATGAACCGAAAGTAGAAACCAAGAAGAGCAGTCGTTTGGCCAGAGAAGACATAGAAGGTGATAATTCCGACGACGAAGAGCGAGTGGATATGAATGCTATAACGGGCGCTAAGGAACGTGAAGAAAGACGCGAAAACTTTTATGCTGCCGAAAAAGATTTTTCTGAAGAAGATTCAGATTGCGAAACTCACGAATGGGAAAATCAACAGATACGCAAAGGTGTTACAGGTGCTCAATTGGTTAATGCCCAACACGAATCGGTGCTGTCGCGTTTCATGATTAAATCAAATATGGGAAATGCTTTAGAAGCTCCATCACAGCCGGAATCAACATCTTCGCTATTGGAACAAGCTTATGCTAAATGTACATTGGAAAAACCTCAGAGAGTGTTAAATGTCAACAAACCGAAAAAGGATAAAACGAAAACAACAGTTTTGCGAACACCGCAAGAGATACGCAACGCTATAGAAGAACGTTTGATTAAATTGAAGGAACTCAATATAAATCATACCGAAGATATTGAGAGAATAGGGAGGGAAATGAAGGCTATGAAATTGGAAGAAATAGATTGTAAGCAAAAGGCACCAACAGCAGCTGCTAAATATAGATTTTATCAAGAAATCAAATGCTATGTAACAGATCTAATAGACTGCTTAAATGAAAAGTCACCATTAATAGTAGATTTGGAAAAACGGTGTCTACAATTTTTTGGTAAACAtcaacactttttaatagagcGCCGCAGGCAGGATGTTAGAGATCAAGCTAAGGAAATGGCTGAGGCAGCTAAACCCTCCACCATACGGCGAGGCGCTGATTACGATGAACAAGTACGACGTGCTGCTGAACGTGAAGGTAGACGTACCAGACGCCGTTGCGAAAGGGAACGTCAAGATTTGCTAGCTTCACATTTAGATGGCATGTCCTCAGATGAAGAAACGTCAGATCGTTATCAGGAACAATTCAAAATTGAATTAGACGAACTTACAAAGGAGAGCTTGGAAGTGATGGACGATGTTACGGACGAGTTCAGTAAAATAGAAATCATTTTAACAAAGTTCTATGCTTGGCGTAAAACGGATATGCCTTCTTATAAAGATGCTTTTGTTAGTTTATGTTTGCCAAAGattcTTGGTCCTTTGATACGTCTTGAAATGTTAACGTGGTCACCTTTATTGGCTGATttcaaagatattgaaaaactaaattggTATTCGGCGGCTATGTTGTATGCGTGGAGTGAAGATGAAACAGAAGAATCATTGAAACAAGATCTTGATGTAAATCTGGTGCCCACTTTACTAGAGAAAATAATTCTGCCCAAATTGAAAgATATCGTAACATATTGCTGGGATCCATTGTCCACAACACAAACATTGCGTTTAATTGGTTTCATAAATCGTTTGGGTAGAGATTTTCCTCTAAAAGAAAATGGCAAAACATTGCAACAACTATTTAAGGCCATTTTGGAGAAAATGAAACTCGCATTGGAAAATGATGTATTCATACCCATCTTCCCCAAGCAaGTACAGGAAAACAAGACATCATTCTTTCAGCGTCAATTTTGCAGTGgtttgaaattgtttcgtaACTTTTTATCCTGGCAAGGCATTATAGCCGATACACCTCTAAGGGAAATGGCTATAAGCTCTTTACTTAATCGTTACTTATTATTAGCCATGAGgGTTTGCACATCTAATGATGCCATCAGCAAAGCCTATATTATAGTAAACACTTTGCCAACGGCCTGGCTACAGCCAGATTCagaatgtttgaaaaatttacaacTATTTATAacatacattaaacagactttGGAATCATGTGATGCCAATAATCCCTTATTTATACAAACTTGTGATAAGGCCAAACAAATCTTACAAAGACTTCATagcaataattaa
Protein Sequence: MSLFRKPKKIQRRAFSSALDEDDDTNGSGATGKDSRRSIDRQMDVDNNDDLIPPPPPQISGRSEKKKSKESKGKSSAIKKEVGGGVGDCGKSKALLSFADEEEDAEIFQVRKSSHSKKVMRMLDKERRRKKKEERGIDNNFSTSSTSTSNYSNNGTHSLNHHNRERENGSRNNSSHNLGSSSTSAHTTSSSEHSKSNKSDKIQTEIRTDDFVLVVKKSEPDIVLNGRAALCAGRNDISDEDVEQSDSERSESKHRFSKPDHLKQMLESGSIPDAAMIHAARKRRQKAREQGDFIVIDEPKVETKKSSRLAREDIEGDNSDDEERVDMNAITGAKEREERRENFYAAEKDFSEEDSDCETHEWENQQIRKGVTGAQLVNAQHESVLSRFMIKSNMGNALEAPSQPESTSSLLEQAYAKCTLEKPQRVLNVNKPKKDKTKTTVLRTPQEIRNAIEERLIKLKELNINHTEDIERIGREMKAMKLEEIDCKQKAPTAAAKYRFYQEIKCYVTDLIDCLNEKSPLIVDLEKRCLQFFGKHQHFLIERRRQDVRDQAKEMAEAAKPSTIRRGADYDEQVRRAAEREGRRTRRRCERERQDLLASHLDGMSSDEETSDRYQEQFKIELDELTKESLEVMDDVTDEFSKIEIILTKFYAWRKTDMPSYKDAFVSLCLPKILGPLIRLEMLTWSPLLADFKDIEKLNWYSAAMLYAWSEDETEESLKQDLDVNLVPTLLEKIILPKLKDIVTYCWDPLSTTQTLRLIGFINRLGRDFPLKENGKTLQQLFKAILEKMKLALENDVFIPIFPKQVQENKTSFFQRQFCSGLKLFRNFLSWQGIIADTPLREMAISSLLNRYLLLAMRVCTSNDAISKAYIIVNTLPTAWLQPDSECLKNLQLFITYIKQTLESCDANNPLFIQTCDKAKQILQRLHSNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00975604;
90% Identity: iTF_01138005;
80% Identity: -