Msac002433.1
Basic Information
- Insect
- Melanaphis sacchari
- Gene Symbol
- pnr
- Assembly
- GCA_002803265.2
- Location
- NW:9996798-10006008[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-16 1.2e-12 46.6 3.2 1 35 422 455 422 456 0.97 2 2 7.5e-18 1.8e-14 52.5 6.8 1 35 480 513 480 514 0.97
Sequence Information
- Coding Sequence
- ATGACCGTTGTTTGTTCCTCTCTAACGTCCTGGACACAATGTCGTTCGACTTCAAAAGGCATGGAGGGCGACGAGACTTCCAGGGGGGTGATAAGACCCGCCCCAGCACATATCAGGACTATTACGACGTCGGGTCACATAACCACCGTGCCTAACGTCGAAGGGCAGACCAGGAACGAGAGCAATACGGCAGACGCAATGTCGCAGTTGAAAATGCAACAACAGAGAGACTTTGGACATAACGGATTATCTAGAAACTGTACTCCCGATAATACGACGGAATGCGTTTCGACGGAGGTACTTATAGACGGATTTAATGAAAACGGCACGCCCGCCGCACACACGCCCGAAGAGGCCGCGTCACCGAATGAGTATCAAAAGGACCATAGTCCGCCCGCAGAAGCCATCCGACTCCGGAGAAACGTGGATGGTACCGAAGTGAATTTGCAAATACCGATGGAAAAGTTGCCCACGTTTCATGGGTACGTCGCTACCACCGAATTTCCAAATCATAATCAGAGATATCAGCGAATCAGATATTTGGAGTACCGAGGACAGTCACCTGAGGATGGCAGTGGTGGTGGAGGTGGTTTTGAACAACCTCTGATCAAGTACGAACATCAtcaacaacagcagcagcagagTAAAATGGATCCGAATTCCAGTTATGTAACATTAGAATCGGTGACGGACGTCTATcaacagcagcaacaacaacagcaacagcaacagcagcaacaacaacaacaacaacagcaacagcaacaacagcaacagcaacaacagAATTACCAACAACAGAACTCGTATCAGACGTATCAAACGTACGACACCGAACAACCAGTGAATGACATATTCAACATATATGACAAGGAAAGCCACGGTGGTGGTGGAGATTACGGCGTAAAATCCGGTCACCAGAAAGGTGGTTACGTTCAACAGACCTTGATGcagcaacaacagcagcagcaaccCGAGTATCAAAACGACGTCAACGGCAGTGGCGGTGGCGGAGGTGGTGGTGAGGGACAACCGGATTTTTGGGGATCCCATGATCAACAGGTGGCAGACTTTACAACGGCGGCAAACGAAAGTTTAGCAGCGGCAAACGCACTGCAAATTCAAGAAGTCGGCTTAGGACCGCCGGATGGAAGCATACAGGTGACTCAGCAGTACGCCATTTTCCAGACCGGTAACCCCGGACCGTCATGGATCGACGAACACTATGATCAAAACGGCATCCTGAATGTGGACATGAAGGAATGCGTGAATTGTGCAGCTAACGTGACGCCCCTGTGGCGCAGGGACGGCACGGGTCATCATCTATGCAACGCGTGCGGCTTGTACAACAGGATCAACGGAGTGAATCGGCCGCCGGTCAGGTCCGCGCAAAAGAAAACTACCCAACAAACAGGAAACAAACGTTCCGGAGTGGCTTGTGCTAACTGCTCGACAAATACGACGACTCTGTGGAGACGAAACAACAACGGAGAACCAGTGTGTAATGCTTGTGGtctctattttaaattgcacAACGTCAATAGGCCGTTGACGATGAAGAAAGACGGCATACAAACGAGAAAGAGGAAACCAAAAAACCCGTCCATCGGAGGTTTCAGCCAAAACTCGTCGTCTAAAGAgaaagGAGAAGTGACAAAGCTTCTACTTCCTCACTTGTTTACTAATTCTTCAGATAATAAACATCAACATGGACATCTTGGTTATGATCAAGCAGTGATGACATCACAAGAACACTTTTTGCCTCACAGCTCTCAAATTCACATCCCTTCATTACCCCCACCGCCAACAAACCTTAACCGCCATACatctaataatggGCAATCAATGGAACAATTGGGCTCTAGAGACATGTTGACCAGTGTGATCACTTCTACCGGAAATCAAAATGTAAGAGATGATTAA
- Protein Sequence
- MTVVCSSLTSWTQCRSTSKGMEGDETSRGVIRPAPAHIRTITTSGHITTVPNVEGQTRNESNTADAMSQLKMQQQRDFGHNGLSRNCTPDNTTECVSTEVLIDGFNENGTPAAHTPEEAASPNEYQKDHSPPAEAIRLRRNVDGTEVNLQIPMEKLPTFHGYVATTEFPNHNQRYQRIRYLEYRGQSPEDGSGGGGGFEQPLIKYEHHQQQQQQSKMDPNSSYVTLESVTDVYQQQQQQQQQQQQQQQQQQQQQQQQQQQQQNYQQQNSYQTYQTYDTEQPVNDIFNIYDKESHGGGGDYGVKSGHQKGGYVQQTLMQQQQQQQPEYQNDVNGSGGGGGGGEGQPDFWGSHDQQVADFTTAANESLAAANALQIQEVGLGPPDGSIQVTQQYAIFQTGNPGPSWIDEHYDQNGILNVDMKECVNCAANVTPLWRRDGTGHHLCNACGLYNRINGVNRPPVRSAQKKTTQQTGNKRSGVACANCSTNTTTLWRRNNNGEPVCNACGLYFKLHNVNRPLTMKKDGIQTRKRKPKNPSIGGFSQNSSSKEKGEVTKLLLPHLFTNSSDNKHQHGHLGYDQAVMTSQEHFLPHSSQIHIPSLPPPPTNLNRHTSNNGQSMEQLGSRDMLTSVITSTGNQNVRDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00134974; iTF_00019854; iTF_00136481; iTF_01329448; iTF_00942473; iTF_00463691; iTF_01033388; iTF_00184974; iTF_00135828; iTF_01168127; iTF_01305210; iTF_01306059; iTF_01304528; iTF_00670623;
- 90% Identity
- iTF_00134974;
- 80% Identity
- -