Agos007570.1
Basic Information
- Insect
- Aphis gossypii
- Gene Symbol
- pnr
- Assembly
- GCA_004010815.1
- Location
- NW:396679-408084[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-16 1.2e-12 46.6 3.2 1 35 417 450 417 451 0.97 2 2 7.5e-18 1.9e-14 52.5 6.8 1 35 475 508 475 509 0.97
Sequence Information
- Coding Sequence
- ATGACCGTTGTTTGTTCCTCTCTAACGTCCTGGACGCAATGTGGCATGGAGGGTGACGGGACTTCCAGAGGGGTGATAAGACCCGCCCCAGCACATATCAGGACCATTACGACGTCGGGCCACATAACCACCGTGCCTAACATCGAAGGGCAGACCAGGGACGAGAGCAATGCCGCAGACACCATGTCGCAGTTAAAAGTGCAACAACAGAGAGACTTTGGACACAACGGGTTATCTAGGAACTGTACTCCTGATAATACGGAATGCGTACCGACGGAGGTGCTTATGGACGGGTTCAATGAAAACGGTACGCCTGCTGCTCACACGCCCGAAGAGGCCGCGTCACCGGACGAATACCAAAAAGACCATAGTCCGCCCGCAGAAGCCATCCGACTCCGGAGAAACGTGGATGGTACCGAAGTGAATTTGCAAATACCGATGGAAAAGTTGCCCACGTTTCATGGGTACGTAGCTACTACCGAATTTCCAAGTCACAATCAGAGATATCAGCGAATTAGATATTTGGAGTACCGAGGACAATCTCCTGAAGATGgcagtggcggcggcggcggaggtTTTGAACAACCCCTGATCAAGTACGAACATCACCAACAACAACAGCAGAGTAAAATGGATCCGAATTCTAGTTACGTGACTTTAGAATCGGTTACGGACGTCTatcaacagcagcagcaacaacagcaacagcagcaacaacaacaacagcaacagcaacagcaacaacaacaacaacaacaacaacaacagcagaATTACCAGCAACAAAACTCGTACCAGACGTACCAAACGTACGAGAACGAACAACCAGTGAATgacatatttaacatatatgaTAAGGAGAGTCACGGTGGTGGTGGAGATTATGGTGTAAAAGCCGGTCACCAGAAGGGTAGTTACGTTCAACAGACTCTGAtgcaacaacaacagcagcagcagcccGAATATCAAGACGACGTCAacggcggtggcggtggcggaGGTGGTGGTGAGGGACAACCGGATTTCTGGGGACCTCACGAGCAACAGGTGGCAGACTTCACAAACGCTGCAAACGAAACTTTAGCAGCGGCCAACGCACTGCAAATTCAAGAAGTCGGCTTAGGGCCGCCGGATGGAAGCATACAGGTGACCCAGCAGTATGCTATTTTCCAGACCGGTAAACCCGGACCATCGTGGATCGACGAACACTACGATCAAAACGGCATCCTGAACGTGGACATGAAGGAATGCGTGAATTGCGCAGCCAACGTGACGCCCCTGTGGCGGAGGGATGGCACGGGCCACCATCTATGCAACGCGTGCGGCTTGTACAACAGGATCAACGGAGTGAATCGGCCGCCGGTCAGATCCGCGCAAAAGAAAACCACCCAACAAACAGGAAACAAACGTTCCGGAGTGGCCTGTGCTAACTGCTCGACAAATACGACGACTCTGTGGAGACGAAACAACAACGGAGAACCAGTGTGTAACGCTTGTGGTCTCTATTTCAAATTGCACAACGTCAATAGGCCGTTGACGATGAAGAAAGACGGCATACAAACGAGAAAGAGGAAACCAAAAAACCCGTCCATCGGTGGTTTCAGCCAAAACTCGTCGTCTAAAGaaaaagGAGAAGTAACAACAAAGCTTCTACTTCCTCACTTGTTTACTAATTCTCCGGATAACAAACATCAACACGGACATCTTGGTGGTTACGACCAAACTGCAATGACATCACAAGAACACTTCCTGCCTCACGGTTCTCAAATTCACATCCCTACATTACCCCCACCGCCAACAAACCTTAACCGTCATTCAtccaataATGGGCAATCGATGGAACAATTGGGCTCTAGAGACATGCTGACCAGTGTGATCACTTCTACCGGAAATCAAAATGTAAGAGATGATTAA
- Protein Sequence
- MTVVCSSLTSWTQCGMEGDGTSRGVIRPAPAHIRTITTSGHITTVPNIEGQTRDESNAADTMSQLKVQQQRDFGHNGLSRNCTPDNTECVPTEVLMDGFNENGTPAAHTPEEAASPDEYQKDHSPPAEAIRLRRNVDGTEVNLQIPMEKLPTFHGYVATTEFPSHNQRYQRIRYLEYRGQSPEDGSGGGGGGFEQPLIKYEHHQQQQQSKMDPNSSYVTLESVTDVYQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQNYQQQNSYQTYQTYENEQPVNDIFNIYDKESHGGGGDYGVKAGHQKGSYVQQTLMQQQQQQQPEYQDDVNGGGGGGGGGEGQPDFWGPHEQQVADFTNAANETLAAANALQIQEVGLGPPDGSIQVTQQYAIFQTGKPGPSWIDEHYDQNGILNVDMKECVNCAANVTPLWRRDGTGHHLCNACGLYNRINGVNRPPVRSAQKKTTQQTGNKRSGVACANCSTNTTTLWRRNNNGEPVCNACGLYFKLHNVNRPLTMKKDGIQTRKRKPKNPSIGGFSQNSSSKEKGEVTTKLLLPHLFTNSPDNKHQHGHLGGYDQTAMTSQEHFLPHGSQIHIPTLPPPPTNLNRHSSNNGQSMEQLGSRDMLTSVITSTGNQNVRDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00973384;
- 90% Identity
- iTF_00134974;
- 80% Identity
- -