Pnig018881.1
Basic Information
- Insect
- Pentalonia nigronervosa
- Gene Symbol
- pnr
- Assembly
- GCA_014851325.1
- Location
- scaffold:92371-100968[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.6 6.3e+03 -2.5 0.4 2 8 12 18 12 18 0.82 2 3 6.7e-16 2.6e-12 46.7 3.2 1 35 404 437 404 438 0.97 3 3 1e-17 3.9e-14 52.5 6.8 1 35 462 495 462 496 0.97
Sequence Information
- Coding Sequence
- ATGACCGTTGTTTGTTCCTCTCTAACGTCCTGGGCACAATGTCATACAACATCAAAAGGCATGGAGGACGACGGGACTTCCAGAGGGGTGATAAGACCCGCCCCAGCTCATATCAGGACCATTACGACGTCGGGCCATATAACCACCGTGCCTAACATCGAAGGGCAAACCAGGGACGAGAGTAATGCGGCAGACACCATGCCGCAGTTGAAAGTGCAACAACAGAGAGACTTTGGACACGACGGGTTATCTAGAAATTGTACTCCCGATAATACGGAATGCGTACCGACGGAGGTGCTTATGGACGGGTTCAACGAAAACGGCACGCCCGCTGCACACACGCCCGAAGAGGCCGCGTCGCCGGACGAATACCAAAAAGACCATAGTCCGCCTGCAGAAGCCATTCGACTCCGGAGGAACGTGGATGGTACCGAAGTAAATCTGCAAATACCGATGGAAAAGTTGGCCACGTTTCACGGGTACGTCACCTCCACAGAATTTCCCAACCATAATCAAAGATATCAGCGGATCAGATATTTGGGGTACCGAGGACAGTCGCCTGAGGATGGCGGTGGTGGCGGAGGAGGTGGTTTTGAACAACCCCTGATCAAGTACGAACATCATCAGCAACAGCAGCAGCAGAGTAAAATGGATCCGAATTCCAGTTATGTAACTTTGGAATCGGTTACGGACGTCTATCAACAACAGCAACAACAGCAACAACAACAGAATTACCAGCAACAGAACTCGTATCAAACGTACCAAACGTACGAAAACGAACAACCAGTGACTGACATATTCAACATATATGACAAAGAGAGCCACGGTGGTGGTGGAGATTATGGTGTAAAAGACGGTCATCAGAAGGGTAGTTATGTTCAACAGACCCTGATGCAGCAACAACAGCAACAGCAACCCGAGTATCAAGATGACGTAAACGGTGGTGGTGTTGTCGGTGGAGGTGGTGGAGAGGGACAACCGGACTTCTGGGGACCCCACGAACAACAGGTGGCTGACTTCACGACGGCGACAAACGAGACTCTGGCAGCAGCCAATGCGCTGCAAATTCAAGAAGTAGGCCTAGGACCGCCGGACGGAAGCATTCAGGTGACTCAGCAGTATGCTATTTTCCAGACCGGCAATCCCGGACCGTCGTGGATTGATGAACACTACGATCAGAACGGCATCCTGAACGTGGACATGAAGGAATGCGTGAATTGCGCGGCCAACGTGACGCCCCTGTGGCGGAGGGACGGCACGGGCCACCATCTATGCAACGCGTGCGGCTTGTACAATAGGATCAACGGAGTGAATCGGCCGCCGGTCAGGTCTGCGCAGAAGAAAACCACCCAGCAAACGGGAAACAAACGTTCCGGAGTGGCCTGTGCCAACTGCTCGACAAATACGACGACTCTGTGGAGACGAAACAACAACGGAGAACCAGTGTGTAACGCTTGTGGTCTCTATTTCAAATTGCACAACGTCAATAGGCCGTTGACGATGAAGAAGGACGGCATACAAACGAGAAAGAGGAAACCAAAGAACCCGTCCGTCGGCGGTTTCAGCCAAAACTCGTCGTCCAAAGTGAAAGGAGAAGTAACAACTAAGCTTCTACTTTCTCACTTGTTTACTAATTCTTCGGATAACAAACATCAACACGGACATCTTGGTTACGATCCAGCTGTGATGACATCACAAGAACACTTCCTGCCTCATGGCTCTCAAATTCATATCCCTTCATTACCCCCACCTCCAACAAACCTTAACCGTCATGTACCTAGTAATGGGCAATCGATGGAACAATTGGGATCTAGAGACATGCTGACCAGTGTGATCACTTCTACTGGAAATCAAAATGTAAGAGATGATTAA
- Protein Sequence
- MTVVCSSLTSWAQCHTTSKGMEDDGTSRGVIRPAPAHIRTITTSGHITTVPNIEGQTRDESNAADTMPQLKVQQQRDFGHDGLSRNCTPDNTECVPTEVLMDGFNENGTPAAHTPEEAASPDEYQKDHSPPAEAIRLRRNVDGTEVNLQIPMEKLATFHGYVTSTEFPNHNQRYQRIRYLGYRGQSPEDGGGGGGGGFEQPLIKYEHHQQQQQQSKMDPNSSYVTLESVTDVYQQQQQQQQQQNYQQQNSYQTYQTYENEQPVTDIFNIYDKESHGGGGDYGVKDGHQKGSYVQQTLMQQQQQQQPEYQDDVNGGGVVGGGGGEGQPDFWGPHEQQVADFTTATNETLAAANALQIQEVGLGPPDGSIQVTQQYAIFQTGNPGPSWIDEHYDQNGILNVDMKECVNCAANVTPLWRRDGTGHHLCNACGLYNRINGVNRPPVRSAQKKTTQQTGNKRSGVACANCSTNTTTLWRRNNNGEPVCNACGLYFKLHNVNRPLTMKKDGIQTRKRKPKNPSVGGFSQNSSSKVKGEVTTKLLLSHLFTNSSDNKHQHGHLGYDPAVMTSQEHFLPHGSQIHIPSLPPPPTNLNRHVPSNGQSMEQLGSRDMLTSVITSTGNQNVRDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00973384;
- 90% Identity
- iTF_00134974;
- 80% Identity
- -