Msac003894.1
Basic Information
- Insect
- Melanaphis sacchari
- Gene Symbol
- lilli
- Assembly
- GCA_002803265.2
- Location
- NW:2537987-2663956[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 2.1e-10 2.5e-06 26.4 19.5 4 246 35 277 33 289 0.47 2 6 0.0037 44 2.5 2.8 320 361 260 300 236 310 0.70 3 6 0.0032 37 2.8 29.6 402 514 411 528 367 528 0.55 4 6 1 1.2e+04 -17.8 39.0 445 486 572 613 530 628 0.40 5 6 1 1.2e+04 -9.9 17.4 143 213 731 807 643 834 0.41 6 6 0.0053 63 2.0 3.5 153 220 935 993 908 1035 0.56
Sequence Information
- Coding Sequence
- atgtATAGGCCACCAGACGAACTGCGTGCCCATAGCAAGATGTCTTGGGACAACCCAAGGGAGTACATGCTGAAAGGAGCTACGCCACTAAAAGTCAAAATGGAACGGGAAAAACAACGTGAGAAAGAAAGACAATCCAGACAGCAACAAGTTTCCGAAAATAATGTCAAAGATAAGAAAGAACTGTTTGGCTCTCCAGTAAAGGTGGACGACGCAAACGATGACGAACAGAGCCAGCTGATCCAGAGTCAGTTGGGTTCGTTCGACGACGCCAAACCGTACTTGGACCTGGTGTTTAGCTGTGGTATCACCGGCATGCCGCCAAGTCCCGCCCCCCCGCCACCGCCTTCATCATCACTGTCCGTCGCCGGAATGATGCAGCACCACCACTCGTCGACATCATCGTATCCCTCCTCGTCGTCTGCAGCCGTCTCCACAGCATCGGTCAAGTCACATCAtcacgccgccgccgccgccgtgaTCGGCCAACAACAGTCATCATCCAGGAGATCCGTATCGCCCGCGTCCGGTGGTGGATCTGTGGTACCCGCTGTAGCGGCGTCCTTCAAGAAACCGACTGTCACGTCACACGCCATGGCCaggtcatcgtcgtcgtctgGGGGCGGCAACGGAGGCTCCTCTTCCTCGGCGCACTTTCAGTCGCCTGCCAATCCACCTAGaagcAGTAATTTTTTGAAACCAGGTGAAATGAAGCCACCTTACTCGTCGATGAGCCGATCCACGGGCAGTAGCATGAGAAGTAGCCATTCTTCGCACCACAGACCCACACATAAACCCAACCTTGCCATATCAAATGTAAAGAATAGTCATAATACAAACGATACCAACACGCCCAGCACGATCGAAGACATTCTAAACGAAATGACCGTCGGTCTTCCACTCGTCTCGGACATTGCTGAAACACCAAGGGTCTCGATTGTTGATTCCAAGTACACCGCCGACGGAAAAGTAGAACCGCAGCAAAGGATGAGCCCCAAAgATGCGTCCGAGAGCTTGAAAAAAATGCTCGGCGAAACCAAACAACTGTTTGCGGATCCCGTGCATAGAAATCAGCAGCCTTCGTCGCACGGCGTTTCGCCGGACGCCGCTGCTTCCGTCTCCgctgcagcagcagcagccgcGGCGGCCGTGCCCATGGACGCCAAACCATCGGGGCCATACAATCATTCGCTATTCGCATCGTACATGGTTAAACCGTCAGTAAGAGGATCCAACATTATGCCGCAACCACAGCAGACGCAACTGATGCAGGAATCCCAACAGTTATCGTTATCACCACCCACTGACAAGATTCGCCGAAGTTCTACATCAACCAACGTCATATCGTCGGACACAACCAACTGCAGTTCTGCCAAGGCCGATAAAACCAGTAGTGACATGTCCGTGGATGAGGATAGTTCATCTAGCGAGGAAGGCGAGAAGGATAGCAGTTCAGATAGTAGCTGCAGTGATAGCGAGAGCAACGACGAGAAGAAGGAAACTGTTCCACCATTGGCTGTTTCGCCGCCCCCACAAGAGGAACAGGAAGAAGAACCTAAGTGGTAtctaaaaaactttttgaaaaagaaTACACCCGACACGAACAACACGACCAGAACGTCACAACAGgAGGAACCTGCTGGAATGACTGATCCTAAATCTAGTCCAAACTTTCCTACACAACGATCTGAAGTTATTGAACTATTATCAGAAATGTCAGATTCAGACTCTAATCACAGTGATAAACAAAAAAGCCAATCTGATTCATCATCCTCTTCATCCTCTTCATCTTCATCATCTGAAGACGAAGacgataaaaagaaaaaatcacATGACAGTAGTTGTGATAGTGATTCATCTTATAGTAGCCGTTCACATGTATCATCTAAGCAAATAACAGACTTACATAAGAAATATTCAGCATTAGCAAAATGTGAGAAAAAGGATCTCAAAAAATCTTCTGTAAAACCTGCTAAATTAGTAGAGAGAAAATCAACACcagtgataattaaaaaagaggAACCAGTTGAAGAACCGGTTGCAAGAAAGAGAGGTCGAAAGAAGGGTCCAACAAAGACTCCAAAACCTCTTCTGCCATCAAAAATCAAGTCAAAACCTTTGATTTCATCAGATACAGAAGATGATGAACCGCCTAAACCAGTACGAAGAGGTCGACCACCAGgtagtaaaaattcaaaagtgaTATCAGCTAGCAGTGAATCTGAAGAATGGACTGATAGTAGCCGCAAGAGTCGAAAAAAAGATACTGAGAAGAAGTCTTCACATTCAGTAAAGAAAACACCCTCTTGGGAAAAAAATCAACCACAAAAACCTGTAGCTCGAGTCACTGCTGCTATGCGTCAGATTAGCAGCGCAGATTCAGACTCCTCTGATGTAGAATGTAGACCACCACCTATGTCAACAACAACTGAAAGTCCACCCAAACTTGATGTTGAAGGAATCAAAGTACAAGATAAGAAAAAGAATGATACTTTAAGGAAGCTGTTTATAACAAGACGTGAGGATGGTGGTGCCAAAAGTGGTGGAAAATCCAAAGGTGGTAAAGGTGGCAAAGGTGgggttattataattgataataacgaAGCAATGCGCAATGATAATGAACGTGTTATATCTCCTGTACCAGTCATTCCACTTATACCTAAAGAACCAGAAAGCCTAAagactttaaaattatctgtGATGTGTAAGATACCATTAAGTAAGCTGCcacctaatttaaattacttggtGAAACCTGCAAGATCTGAAGAGCTAAGAACCTGTGCTGATTTGGCAAATACACGGCAAGATGAAAAGAAACAAAAGCATAGACATCATAAACATCATCACAAAGGCAGTCCATCACAAACCGCTCCAGGATCAGAAAAATCTAAATCCAACGAATCTCCAGCTAATACTGCTCCGCCTACTCAGCCTCTTCTCCAACAGCCATCTTCTGATGGCTATTCCAAAGGTATGGTGGAGAATGTTAATGTATGGCGTAAGCCAACATCTGTATGTGCAGTAATACCAGAAGCAAAAGTCAAACCTCTTGAGCATAgtacTATGTCATATTTGCAACGCCCAGCTGCTACCAGTGGTCTGATTCATGGTCCTTATGAAGAATCATCTGAAGATGAAGATGGTGGACCACCTCCTTTCCTTCCTTATAGTACTACTGCTGTTCAAATAATGGACCCACGGTATAAACGTTCACTGGAATTAGATCAATACTCTCCTAATGCATCAAAAAGACGAAAGTTTCATAATCCAACTGGGTCAGCAACTCTAGGAAGATATGCTACTGGAAtaGGCGATggattaataaatgatatctTGGTGGACCGCATGCATGAAGTTCCTGTCCAACCTCCTCCCAGACAACCTTCATGGCGTATGCAATCCATGCACCATCAGTACCCTCCAAGGAAAAGATTCTTCTCATACTTTGTTACCGACTTATATCCTGAAAACAAtatgcaTCAAGAGGTTCCATTAAAGGAGGCACAAGCATTGACCAAATTAGCAGAATACGAGCCTGATCCTATTACCCaagaaatgaaatatttagatgGTATACTATGTTTTGTGCTTAGTGGTCATTTGATGGAGAATGATGGGACTAGGGAAAGAGCAGTGCTCAAGATTTATAATGATACTGTTGACTTAATtaaAGTTATTTGGTCAAAAATCTACAACTACCGTGCAGACTGTGATCACGAGGAGCTAGacgaaatatttgaaatggcTGATAATCCAGAAAGGGATAATAGACTGTTAATACTTTGGATGAGGTGTCTTAGCTTTTTGAGattgaaattgtttaaactACTTGTATACCAAAATAGACAGAATTTCAAGACTGTTCAGCAACATTTCCTCAAGAATGTGGGTTCAAGTCCCATCTCACCCTCTCCATCACCAGCCAGTTCTGTGGAAAGTCACTCATCAGGATATTGTAGTAGTAGTATTACTCCTGGTGGTGGAGCTGTATCATCAGGGGTTGCGACAGGTGTGATCGGAGTTCCAATAGTTGTACACAATGCTATTCATTCGcaacatatattgtattgtcatTTGGCTGCAGCACACGAAATGTGGCAACGTGCTGACCTTTTAGTTATGCGTGGAAAACATACACaGTTCTTTGTTGAGATGGACCGGCATTGTGGACCGCTAACATTACATAGCACTGGCCATGATCTCACACTGTATGCTCGCATTGCTATTTCTCGCATGAGATgtgagtttaatataaaaaattaccttcCATGA
- Protein Sequence
- MYRPPDELRAHSKMSWDNPREYMLKGATPLKVKMEREKQREKERQSRQQQVSENNVKDKKELFGSPVKVDDANDDEQSQLIQSQLGSFDDAKPYLDLVFSCGITGMPPSPAPPPPPSSSLSVAGMMQHHHSSTSSYPSSSSAAVSTASVKSHHHAAAAAVIGQQQSSSRRSVSPASGGGSVVPAVAASFKKPTVTSHAMARSSSSSGGGNGGSSSSAHFQSPANPPRSSNFLKPGEMKPPYSSMSRSTGSSMRSSHSSHHRPTHKPNLAISNVKNSHNTNDTNTPSTIEDILNEMTVGLPLVSDIAETPRVSIVDSKYTADGKVEPQQRMSPKDASESLKKMLGETKQLFADPVHRNQQPSSHGVSPDAAASVSAAAAAAAAAVPMDAKPSGPYNHSLFASYMVKPSVRGSNIMPQPQQTQLMQESQQLSLSPPTDKIRRSSTSTNVISSDTTNCSSAKADKTSSDMSVDEDSSSSEEGEKDSSSDSSCSDSESNDEKKETVPPLAVSPPPQEEQEEEPKWYLKNFLKKNTPDTNNTTRTSQQEEPAGMTDPKSSPNFPTQRSEVIELLSEMSDSDSNHSDKQKSQSDSSSSSSSSSSSSEDEDDKKKKSHDSSCDSDSSYSSRSHVSSKQITDLHKKYSALAKCEKKDLKKSSVKPAKLVERKSTPVIIKKEEPVEEPVARKRGRKKGPTKTPKPLLPSKIKSKPLISSDTEDDEPPKPVRRGRPPGSKNSKVISASSESEEWTDSSRKSRKKDTEKKSSHSVKKTPSWEKNQPQKPVARVTAAMRQISSADSDSSDVECRPPPMSTTTESPPKLDVEGIKVQDKKKNDTLRKLFITRREDGGAKSGGKSKGGKGGKGGVIIIDNNEAMRNDNERVISPVPVIPLIPKEPESLKTLKLSVMCKIPLSKLPPNLNYLVKPARSEELRTCADLANTRQDEKKQKHRHHKHHHKGSPSQTAPGSEKSKSNESPANTAPPTQPLLQQPSSDGYSKGMVENVNVWRKPTSVCAVIPEAKVKPLEHSTMSYLQRPAATSGLIHGPYEESSEDEDGGPPPFLPYSTTAVQIMDPRYKRSLELDQYSPNASKRRKFHNPTGSATLGRYATGIGDGLINDILVDRMHEVPVQPPPRQPSWRMQSMHHQYPPRKRFFSYFVTDLYPENNMHQEVPLKEAQALTKLAEYEPDPITQEMKYLDGILCFVLSGHLMENDGTRERAVLKIYNDTVDLIKVIWSKIYNYRADCDHEELDEIFEMADNPERDNRLLILWMRCLSFLRLKLFKLLVYQNRQNFKTVQQHFLKNVGSSPISPSPSPASSVESHSSGYCSSSITPGGGAVSSGVATGVIGVPIVVHNAIHSQHILYCHLAAAHEMWQRADLLVMRGKHTQFFVEMDRHCGPLTLHSTGHDLTLYARIAISRMRCEFNIKNYLP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01346444;
- 90% Identity
- iTF_01305543; iTF_00463337; iTF_00019021; iTF_01304174; iTF_01167600; iTF_01328626; iTF_01032883; iTF_01037782; iTF_00940486; iTF_00136121; iTF_00135315;
- 80% Identity
- -