Basic Information

Gene Symbol
lilli_1
Assembly
GCA_949089665.1
Location
CARXXK010000003.1:19458232-19498409[-]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 8.8e-11 3.1e-06 28.7 18.6 4 235 2 234 1 256 0.50
2 7 0.008 2.8e+02 2.4 3.9 301 361 203 267 193 290 0.68
3 7 0.0059 2.1e+02 2.9 28.3 402 514 378 495 334 495 0.53
4 7 2 7.1e+04 -15.7 34.9 448 494 537 579 518 593 0.61
5 7 2 7.1e+04 -9.4 18.9 126 215 685 769 615 807 0.35
6 7 0.0047 1.7e+02 3.2 2.8 153 220 911 969 889 1013 0.56
7 7 2 7.1e+04 -6.4 2.8 204 219 1277 1292 1257 1304 0.39

Sequence Information

Coding Sequence
ATGGAACGGGAAAAACAACGTGAGAAAGAAAGGCAGTCCAGACAGCAACAAGTTTCCGAGAACAATGTCAAAGACAAGAAAGAACTGTTCGGTTCTCCAGTAAAGGTGGACGATGCAAACGACGACGAACAGAGCCAGCTGATCCAGAGTCAGTTGGGTTCGTTCGACGACGCCAAACCGTACTTGGACCTGGTGTTCAGCTGCGGAATCGCCGGCATGCCAGCGAGTCCCGCGCCTCCGCCTCCGCCGTCGTCTTCGTCGCTGTCCGTCGCCGGTATGATGCAACACCACCACTCGTCCACGTCGTCATCATATCCCTCCTCGTCGTCTGCAGCCGTCTCCGCAGCATCGGCCAAGTCACACCATCacgccgccaccgccgctgcCTCTGTGATCGGCCAACAGCAGTCGTCGTCCAGGAGATCAGTGTCGCCCGCGTCCGGCGGTGGATCCGTGGCACCCACTGTCGCCGCGTCCTTTAAGAAACCGACCGTCACGTCGCACGCCATGGCCAGGTCCGGGGCCGTAGGGGGCGGCTCGTCTTCGTCGGCGCACTTTCAACCACCCGCCAACCCACCCAGgaaCAGTAACTTTTTGAAACCTGGTGAAATGAAGCCACCTTACTCGTCGATGAGCCGATCGACGAGCAGTAGCATGAGGAGTAGCCATTCTTCGCACCACAGGCCCACACACAAGCCCAACCTTGCCATACCAAATGTAAAGAATAGTCATAATTCAAACGATACCAACACGCCCAGCACGATCGAAGACATCCTAAACGAAATGACTGTCGGTCTTCCGCTCGTGTCGGACATCGCTGAAACTCCGAGGGTCTCGATCGTCGACTCCAAGTACACCGCAGACGGAAAGGTGGAACCGCAGCAAAGGATGAGTCCCAAAGACGCGTCCGAGAGCCTGAAAAAATTGCTCGGCGAATCCAAACAACTGTTTCCGGATCCCGTGCACAGAAACCAACAGCCGTCGTCGCACGGCGTCTCGCCGGACGCCGCTGCTTCCGTCTCcgctgcagcagcagcagccgcCGCGGCCGTGCCCATGGACGCCAAACCGTCGGGGCCGTACAACCATTCGCTGTTCGCATCGTACATGGTCAAACCGTCGGTCAGAGGGTCGAACATAATGCCGCAACCGCAGCAGACGCAACTGATGCAGGAATCTCAACAGTTGTCGTTATCACCGCCCACTGACAAGGTCCGCCGGAGTTCCACGTCGACCAACGTCATATCGTCCGACACAACCAACTACGGTTCCACAAAGGCCGACAAGACCAGCAGTGACATGTCTGTGGACGAAGACAGCTCGTCCAGCGAAGAAGGCGAGAAGGACAGTAGTTCGGATAGCAGCTGCAGCGACAGTGAGAGTAACGACGAGAAGAAGGACACCGTCCCGCCGGCAGCCGTTTCACCGCCCCCGCAAGAGGAACAGGAAGAAGAGCCCAAGTGGTATCTgaaaaactttttgaaaaagAGCACGCCCGACACGAACAACACGACCAGGACGTCACAACAGgAGGAACCTGTTGGATTGGGCGATCCTAAATCTAGTCCAGGCTTTCCTACGCAGCGATCTGAGGTTGTTGAATTATTATCTGAAATGTCAGACTCAGACTCTAACCACAGTGATAAACAAAAAAGCCAATCATCTTCATCATCTTCATCGTCTTCATCATCCTCATCATCCGAAGACGAAGacgataaaaagaaaaaacctcGTGACACTAGTTGTGATAGTGATTCATCCTATAGTAGCCGTTCACATACATCATCTAAACCAATAACGGACTTACACAAGAAATACTCAGCATTAGCAAAGTGTGAGAAAAAGGATCTCAAGAAATCATTAGTAAAACCTGCTAAATTAGTAGAAAGGAAACCGACACCAGTGATAGTAAAGGAAGAGAAACCAATTGAAGAACCAGTTGCAAAAAAACGAGGTCGAAAGAAGGGTCAGACAAAAACTCCTAAACCTCTTCCGCCATCAAAAATCAAGTCAAAACCTTTGGTTTCATCAGATACAGAGGATGATGAACCACCAAAACCAGTAAAGATAAGTGAAAAGCGAAGAGGTCGACCACCAGGTAGTAAAAAGTCAAAAGTGGTATCAGCTAGCAGTGAATCTGAAGAATGGACTGATAGTAGTCGAAAGAGACGGAAAAAAGATTCCGAAAAGAAGTCTTCACATTCAGTAAAGAAAACACCGTCTTGGGACAAAAATCAACCTCAAAAACCAGTAGCTCGAGTCAGTGCTGCTTTGCGTCCACCACGTTCAATTTCGAGCAGTGCAGATTCAGACTCCTCTGATGTAGAATGCAGGCCGCCACCCATCTCAACAACAACTGAAAGTCCACCCAAACTTGATGTAGAGGGAATCAAAGTGCAAGATAAGAAAAAGAATGATACTTTAAGGAAACTGTTTATAACACGGCGTGAAGATGGTGGGGCCAAGAGTGGTGGAAAATCCAAAGGTGGCAAAGGTGGCAAAGGTGgagttattataattgataacaatgAAGCAATGCGCAATGATAACGAACGTGTTATATCTCCTGTACCAGTCATTCCACTTATACCTAAAGAACCAGAAGGCCTAAAGACTTTAAAGTTATCTGTGATGTGTAAAATACCATTAAGTAAGTTGCCACCCAATTTAAATTACTTGGTGAAACCGGCAAGATCTGAAGAGCTGAGAACCTGTGCTGATTTGGCAAATACGAGGCaagatgaaaaaaaacaaaagcacAGACATCATAAACACCATCACAAAGGCAGTCCATCACAAACCATTTCAGGATCAGAAAAATCTAAATCCAATGAATCTCCAGCTAACACTGCTCCGCCTACTCAGCCTCTTCTCCAACAGCCTTCTTCTGATGGCTATTCCAAAGGCATGATGGATAATGTTAATGTATGGCGTAAGCCAACATCTGTTTGTGCAGTAATACCAGAAGCAAAAGTTAAACCCCTTGAGCatagtaccaTGTCATACTTACAACGTCCAGCTGCCACCAGCGGTTTGATTCACGGCCCTTATGAAGAATCATCTGAAGATGAAGATGGACCACCTCCTTTCCTTCCTTATAGTACTACCTCTGTTCAAATAATGGACCCTCGGTATAAACGTTCACTGGAACTAGATCAATACTCTCCTAATGCGTCGAAAAGACGAAAATTTCACAATCCAACTGGGTCAACAACACTAGGAAGATATGCTACAGGAATAGGTGACGGATTAATAAATGATATCTTGGTGGATCGCATGCATGAAGTTCCTGTACAACCTCCTCCCAGACAACCATCATGGCGCATGCAATCTATGCACCACCAGTATCCTCCAAGAAAAAGATTCTTCTCATACTTTGTAACTGACTTATACCCTGAAAACAAtatgCACCAAGAGGTCCCGTTGAAAGAGGCACAAGCATTGACCAAATTAGCAGAGTACGAGCCTGATCCCATTACACAAGAAATGAAATATTTGGACGGTATACTGTGTTTTGTACTTAGCGGACATTTGATGGAGAATGATGGGACTAGGGAAAGAGCAGTGCTCAAGATTTATAATGACACTGTTGACTTAATTaaAGTTATTTGGTCAAAAATATACAACTACCGTGCAGACTGTGATCACGAGGAGCTAgatgaaatatttgaaatggcTGATAATCCAGAAAGGGATAATAGGCTGTTAATACTTTGGATGAGGTGTCTTAGTTTCTTGcgattaaaattgtttaagctACTCGTATACCAAAATCGACAGAATTTCAAGACTGTTCAGCAACATTTCCTgaagAATGTGGGTTCAAGTCCCATTTCACCGTCTCCATCACCAGCTAGTTCTGTGGAGAGTCACTCTTCAGGATACTGTAGTAGTAGCATCACACCCAGTGGTGGAGCTGCATCTGGGGCTGTGACAGGTGCGATCGGTGTTCCAATAGTTGTGCACAATGCTATTCATTCGCAGcacatattgtattgtcatttgGCAGCAGCACATGAAATGTGGCAACGTGCCGACCTTTTAGTTATGCGCGGGAAACATACACAATTCTTTGTTGAGATGGACCGACATTGTGGACCTCTCACACTACATAGTACCGGCCATGATCTCACACTGTACGCTCGCATTGCCATTTCCCGCATGAGATGTGagtttaacataaaaaattacctTCCATGA
Protein Sequence
MEREKQREKERQSRQQQVSENNVKDKKELFGSPVKVDDANDDEQSQLIQSQLGSFDDAKPYLDLVFSCGIAGMPASPAPPPPPSSSSLSVAGMMQHHHSSTSSSYPSSSSAAVSAASAKSHHHAATAAASVIGQQQSSSRRSVSPASGGGSVAPTVAASFKKPTVTSHAMARSGAVGGGSSSSAHFQPPANPPRNSNFLKPGEMKPPYSSMSRSTSSSMRSSHSSHHRPTHKPNLAIPNVKNSHNSNDTNTPSTIEDILNEMTVGLPLVSDIAETPRVSIVDSKYTADGKVEPQQRMSPKDASESLKKLLGESKQLFPDPVHRNQQPSSHGVSPDAAASVSAAAAAAAAAVPMDAKPSGPYNHSLFASYMVKPSVRGSNIMPQPQQTQLMQESQQLSLSPPTDKVRRSSTSTNVISSDTTNYGSTKADKTSSDMSVDEDSSSSEEGEKDSSSDSSCSDSESNDEKKDTVPPAAVSPPPQEEQEEEPKWYLKNFLKKSTPDTNNTTRTSQQEEPVGLGDPKSSPGFPTQRSEVVELLSEMSDSDSNHSDKQKSQSSSSSSSSSSSSSSEDEDDKKKKPRDTSCDSDSSYSSRSHTSSKPITDLHKKYSALAKCEKKDLKKSLVKPAKLVERKPTPVIVKEEKPIEEPVAKKRGRKKGQTKTPKPLPPSKIKSKPLVSSDTEDDEPPKPVKISEKRRGRPPGSKKSKVVSASSESEEWTDSSRKRRKKDSEKKSSHSVKKTPSWDKNQPQKPVARVSAALRPPRSISSSADSDSSDVECRPPPISTTTESPPKLDVEGIKVQDKKKNDTLRKLFITRREDGGAKSGGKSKGGKGGKGGVIIIDNNEAMRNDNERVISPVPVIPLIPKEPEGLKTLKLSVMCKIPLSKLPPNLNYLVKPARSEELRTCADLANTRQDEKKQKHRHHKHHHKGSPSQTISGSEKSKSNESPANTAPPTQPLLQQPSSDGYSKGMMDNVNVWRKPTSVCAVIPEAKVKPLEHSTMSYLQRPAATSGLIHGPYEESSEDEDGPPPFLPYSTTSVQIMDPRYKRSLELDQYSPNASKRRKFHNPTGSTTLGRYATGIGDGLINDILVDRMHEVPVQPPPRQPSWRMQSMHHQYPPRKRFFSYFVTDLYPENNMHQEVPLKEAQALTKLAEYEPDPITQEMKYLDGILCFVLSGHLMENDGTRERAVLKIYNDTVDLIKVIWSKIYNYRADCDHEELDEIFEMADNPERDNRLLILWMRCLSFLRLKLFKLLVYQNRQNFKTVQQHFLKNVGSSPISPSPSPASSVESHSSGYCSSSITPSGGAASGAVTGAIGVPIVVHNAIHSQHILYCHLAAAHEMWQRADLLVMRGKHTQFFVEMDRHCGPLTLHSTGHDLTLYARIAISRMRCEFNIKNYLP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01346444;
90% Identity
iTF_00973037;
80% Identity
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