Agos005840.1
Basic Information
- Insect
- Aphis gossypii
- Gene Symbol
- lilli
- Assembly
- GCA_004010815.1
- Location
- NW:746-57391[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 1e-10 1.3e-06 27.5 21.9 4 248 32 274 30 292 0.51 2 7 0.013 1.6e+02 0.7 4.2 303 361 233 292 231 323 0.70 3 7 0.0028 35 3.0 29.3 402 514 403 520 364 520 0.53 4 7 1 1.3e+04 -17.0 36.3 450 492 564 602 522 623 0.39 5 7 1 1.3e+04 -11.8 19.1 138 492 722 765 649 832 0.41 6 7 0.0059 74 1.9 1.8 444 475 937 968 879 1030 0.60 7 7 1 1.3e+04 -6.1 2.3 205 219 1302 1316 1282 1329 0.41
Sequence Information
- Coding Sequence
- ATGAATTACCGTCCAAAACCTAATCCTTTCGAAGGCTTGAGGAACTCTCCGTCTTCGCACAACCGTGGAGGACTCAGCTATATGACTACAATGGAACGGGAAAAACAACGTGAGAAAGAAAGGCAATCCAGACAGCAACAAGTTTCCGAGAACAATGTCAAAGACAAGAAAGAACTGTTCGGCTCTCCAGTAAAGGTGGACGACGCAAACGACGACGAACAGAGCCAGCTGATCCAGAGTCAGTTGGGTTCGTTCGACGACGCCAAACCGTACTTGGACCTGGTGTTCAGCTGCGGTATCACCGGCATGCCGCCGAGTCCCGCCCCTCCGCCACCGCCATCATCGTCACTGTCCGTCGCCGGAATGATGCAGCACCACCACTCGTCGACATCGTCGTATCCCTCCTCGTCGTCTGCAGCCGTCTCCGCAGCATCGGTCAAGTCACACCATcacgccaccgccgccgctgtGATCGGTCAACAACAGTCGTCATCCAGAAGATCCGTATCGCCCGCGTCCGGCGGCGGATCACAGGCACCCGCTATCGCGGCGTCCTTCAAGAAACCAACTATCACGTCGCACGCCATGGCTAGGTCGTCATCTGGGGGCGGCAGTAGCGGTTCCTCTTCGTCGACGCACTTTCAGCCTCCAGCCAATCCGCCTAGAAGCAGTAACTTTTTGAAACCCGGTGAAATGAAGCCACCCTACTCGTCGATGAGCCGATCAACGAGCAGCAGCATGAGAAGTAGCCATTCTTCACACCACAGGCCCACACATAAACCCAACCTTGCCATATCAAATagTCATAATTCAAACGATACCAACACGCCTAGCACGATCGAAGACATTCTAAACGAAATGACAGTAGGTCTTCCGCTCGTGTCGGACATAGCTGAAACGCCAAGGGTCTCGATCGTCGATTCCAAGTACACCGCCGATGGAAAGATAGAACCGCAACAAAGGATGAGCCCCAAAGACGCATCCGAGAGCTTGAAAAAAATGCTCGGTGAACCCAAACAACTGTTTGCGGATCCCGTACATAGAAATCAGCAGCCTTCGTCGCACGGCGTTTCGCCAGACGCCGCTGCTTCGGTCTCCgctgcagcagcagcagccgcAGCGGCCGTGCCCATGGACGCCAAACCATCGGGGCCGTACAACCATTCGCTGTTTGCATCGTACATGGTCAAACCTTCGGTAAGAGGATCCAACATTATGCCGCAACCGCAGCAGACGCAACTGATGCAGGAATCGCAACAGTTATCGTTATCACCGACCACTGACAAGATCCGCTGGAGCTCTACGTCGACTAACGTCATATCGTCGGACACAACCAACTGCAATTCCGCCAAGGCCGACAAGACCAGTAGTGATATGTCCGTGGACGAGGACAGTTCGTCCAGCGAGGAAGGTGAGAAGGACAGCAGTTCAGATAGTAGCTGCAGTGATAGCGAGAGCAACGACGAAAACAAGGAAACAATTCCGCCCGCTGCCGTTTCACCACCTCCGCAAGAGGAACAGGAAGAAGAACCCAAGTGGTATCtgaaaaactttttgaaaaagAGTACGCCCGATACGAACAACACGACCAGGACGTCACAACAGgaGGAACCTGTTGGAATGACTGATCCTAAATCTAGTCCAAACTTTCCTACACAACGATCTGAGGTTATTGAACTTTTATCAGAAATGTCAGACACAGACTCTAATCACAGTGATAAGCAAAAAAGCCAATCTGACTCCTCATCTTCTTCATCTTCTTCATCTTCATCATCTGAAGACGAAGacgataaaaagaaaaagccTCATGATAGTAGTTGTGATAGTGATTCATCTTACAGTAGCCGTTCACATGCATCATCTAAGCCAATAACAGACTTACACAAGAAATACTCAGCATTAGCTAAGTGTGAGAAAAAGGATCTCAAAAAATCATCTGTTAAACCTGCTAAATTAGTAGAGAGAAAGTCAACACcagtgttattaaaaaaagaggATCCAGTTGAAGAACCGGTTGTGAAAAAGAGAGGTAGAAAGAAGGGTCCGCTAAAGACTTCAAAACCTCTTCTACCATCAAAAATCAAGTCAAAACCTTTGATTTCATCAGACACAGAAGATGATGAACCGCCTAAACCAGTAAAGATAAGTGAAAAACGAAGAGGTCGACCACCAGGTAAAAAGTCAAAAGTGATATCAGCTAGCAGTGAATCAGAAGAATGGACTGATAGTAGCCGTAAAAGCAGAAAAAAGGATTCTGAAAAGAAGTCTTCTCATTCATTAAAGAAAACACCATCCTGGGAAAAAAACCAACCACTAAAACCTGTAGCTCGAGTGAGTGCTGCTCTGCGTCCACCACGTTCAATTTCAAGCAGTGCAGATTCAGACTCCTCTGATGTAGAATGTAGGCCGCCACCTATGTCAACAGCAACTGAAAGTCCACCCAAACTTGATGTTGAAGGAATCAAAGTGCAAGATAAGAAAAAGAATGATACTTTAAGGAAGCTGTTTATAACACGACGTGAAGACGGTGGTGCTAAAAGTGGTGGAAAATCCAAAGGTGGTAAAGGTGGCAAAGGTggagttattataattgataacaaCGAAGCAATGCGCAATGACAACGAACGTGTTATATCGCCTGTACCAGTCATTCCACAAATGCCTAAAGAACCTGAAAGCCAAAagtctataaaattatctgtGATGTGTAAAATACCATTAAGTAAGCTGCcacctaatttaaattacttggtGAAACCAGCAAGATCTGAGGAGCTAAGAACCTGTGCTGATTTGGCAAATACACGGCAAGATGAGAAAAAACAAAAGCATAGACATCATAAACATCATCACAAAGGCAGTCCATCACAAATCACTTCAGGATCAGAAAAATCCAAATCCAACGAATCTCCAGCTAACATTGTTCCACCTACTCAGACTCTTCTCCAACCGCCATCTTCTGATGGCTATTCCAAAGGCATGATGGATAATGTTAATGTATGGCGCAAGCCAACATCTGTATGTGCAGTAATACCAGAAGCAAAAGTTAAACCTCTTGAGCATAgtactaTGTCATACTTGCAACGCCCAGCTGCTACCAGTATGATTCATGGCCCTTACGAAGAATCATCTGATGATGAAGATGGTGGACCACCTCCTTTCCTTCCTTATAGTACTACTGCTGTTCAAATTATGGACCCACGGTATAAACGTTCACTGGAATTAGATCAATACTCTCCTAATGCTTCAAAAAGACGAAAATTTATCAATCCGACTGGGTCAGCAACACTAGGAAGATATGCTGCTGGAATAGGTGATggattaataaatgatatctTGGTGGATCGCATGCATGAAGTTCCTGTACAACCTCCCCCCAGACAACCTTCATGGCGTATGCAATCCATGCACCACCAGTATCCTCCAAGGAAAGGATTCTTCTCATACTTTGTAACTGACTTATACCCTGAAAACAAtatgcaCCAAGAGGTCCCGTTAAAGGAGGCACAAGCTTTGACCAAATTAGCAGAATACGAGCCTGATCCTATTACCCaagaaatgaaatatttagatGGTATACTATGTTTTGTTCTTAGTGGTCATTTGATGGAGAATGATGGGACTAGGGAAAGAGCAGTGCTCAAGATTTATAATGATACTGTTGacttaataaaaGTCATTTGGtcaaaaatttataactatcgtGCAGACTGTGATCACGAAGAGCTagatgaaatatttgaaatggcTGATAATCCAGAAAGGGATAATAGACTGTTAATACTTTGGATGAGGTGTCTTAGCTTCTTgagattaaaattgtttaaactaCTTGTATACCAAAATAGACAGAATTTCAAGACTGTTCAGCAACATTTCCTTAAGAATGTGGGTTCAAGTCCCATTTCACCCTCTCCATCACCAGCCAGTTCTGTGGAGAGTCACTCATCAGGATACTGTAGTAGTAGCATTACACCCAGTGGTGGAGCTGTATCATCAGGGGCTGCGACAGGTGTGATTGGAGTTCCAATAGTTGTACACAATGCTATTCATTcacaacacatattatattgtcatttgGCTGCAGCGCACGAAATGTGGCAGCGTGCTGATCTTTTAGTTATGCGCGGAAAACACACACAATTCTTTGTTGAGATGGATCGACATTGTGGACCTCTCACATTACATAGCACTGGCCATGATCTCACACTGTATGCTCGCATTGCCATTTCTCGCATGAGATgtgagtttaatataaaaaattaccttcCATGA
- Protein Sequence
- MNYRPKPNPFEGLRNSPSSHNRGGLSYMTTMEREKQREKERQSRQQQVSENNVKDKKELFGSPVKVDDANDDEQSQLIQSQLGSFDDAKPYLDLVFSCGITGMPPSPAPPPPPSSSLSVAGMMQHHHSSTSSYPSSSSAAVSAASVKSHHHATAAAVIGQQQSSSRRSVSPASGGGSQAPAIAASFKKPTITSHAMARSSSGGGSSGSSSSTHFQPPANPPRSSNFLKPGEMKPPYSSMSRSTSSSMRSSHSSHHRPTHKPNLAISNSHNSNDTNTPSTIEDILNEMTVGLPLVSDIAETPRVSIVDSKYTADGKIEPQQRMSPKDASESLKKMLGEPKQLFADPVHRNQQPSSHGVSPDAAASVSAAAAAAAAAVPMDAKPSGPYNHSLFASYMVKPSVRGSNIMPQPQQTQLMQESQQLSLSPTTDKIRWSSTSTNVISSDTTNCNSAKADKTSSDMSVDEDSSSSEEGEKDSSSDSSCSDSESNDENKETIPPAAVSPPPQEEQEEEPKWYLKNFLKKSTPDTNNTTRTSQQEEPVGMTDPKSSPNFPTQRSEVIELLSEMSDTDSNHSDKQKSQSDSSSSSSSSSSSSEDEDDKKKKPHDSSCDSDSSYSSRSHASSKPITDLHKKYSALAKCEKKDLKKSSVKPAKLVERKSTPVLLKKEDPVEEPVVKKRGRKKGPLKTSKPLLPSKIKSKPLISSDTEDDEPPKPVKISEKRRGRPPGKKSKVISASSESEEWTDSSRKSRKKDSEKKSSHSLKKTPSWEKNQPLKPVARVSAALRPPRSISSSADSDSSDVECRPPPMSTATESPPKLDVEGIKVQDKKKNDTLRKLFITRREDGGAKSGGKSKGGKGGKGGVIIIDNNEAMRNDNERVISPVPVIPQMPKEPESQKSIKLSVMCKIPLSKLPPNLNYLVKPARSEELRTCADLANTRQDEKKQKHRHHKHHHKGSPSQITSGSEKSKSNESPANIVPPTQTLLQPPSSDGYSKGMMDNVNVWRKPTSVCAVIPEAKVKPLEHSTMSYLQRPAATSMIHGPYEESSDDEDGGPPPFLPYSTTAVQIMDPRYKRSLELDQYSPNASKRRKFINPTGSATLGRYAAGIGDGLINDILVDRMHEVPVQPPPRQPSWRMQSMHHQYPPRKGFFSYFVTDLYPENNMHQEVPLKEAQALTKLAEYEPDPITQEMKYLDGILCFVLSGHLMENDGTRERAVLKIYNDTVDLIKVIWSKIYNYRADCDHEELDEIFEMADNPERDNRLLILWMRCLSFLRLKLFKLLVYQNRQNFKTVQQHFLKNVGSSPISPSPSPASSVESHSSGYCSSSITPSGGAVSSGAATGVIGVPIVVHNAIHSQHILYCHLAAAHEMWQRADLLVMRGKHTQFFVEMDRHCGPLTLHSTGHDLTLYARIAISRMRCEFNIKNYLP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01346444;
- 90% Identity
- iTF_00973037;
- 80% Identity
- -