Basic Information

Insect: Megachile willughbiella
Gene Symbol: lola
Assembly: GCA_945859635.1
Location: CAMAOE010000072.1:1469104-1471317[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.34 4.4e+02 1.1 0.3 30 40 181 191 181 197 0.76

2 5 5.3e-07 0.00069 19.7 0.0 2 38 201 237 200 243 0.84

3 5 7.2e-11 9.5e-08 32.0 0.0 5 39 254 287 251 294 0.85

4 5 0.17 2.2e+02 2.0 0.0 21 34 321 334 307 339 0.80

5 5 1.8e-11 2.3e-08 34.0 0.1 4 39 365 400 362 405 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.34	4.4e+02	1.1	0.3	30	40	181	191	181	197	0.76
2	5	5.3e-07	0.00069	19.7	0.0	2	38	201	237	200	243	0.84
3	5	7.2e-11	9.5e-08	32.0	0.0	5	39	254	287	251	294	0.85
4	5	0.17	2.2e+02	2.0	0.0	21	34	321	334	307	339	0.80
5	5	1.8e-11	2.3e-08	34.0	0.1	4	39	365	400	362	405	0.93

Sequence Information

Coding Sequence: ATGTCTGAGGTTATTAACCAACATGAGATTAATCAGAGCTACTGGTTTAAATGGAATGATTATCAAAATCATTTATCCGATGTAGTTAGACAACTTTTGGATGAAGATTGCATGGTGGATGTTACCTTAGCAGCTGCGGGAGAACGAATTCATGCTCATCGAATAGTCCTCTGTGCTTGTAGCACGTTATTTCGAGATATATTAAGTCAAGTAAATGAAGATCATCCGACAATAATATTGAGCGATATATCTGCTCAAGATATAAAATCTATTGTAGAATTTACTTATCACGGAGAAGTAAGGGTTCCAGTTGATAATATCAGCAGTTTGTTGGATGCTGCACGTTCTTTAAAAATATGTGGTCTTATCGAGATCGATGGACTTGATGAAAGTGATTCAGTTATAAGCTCAAAAGATTTCAATGATAATAATGAAGAACCAACAACCATAATTAGCGAAGAGACAGAAGAAAATGTTATTAGTGCATTACAACATAGCTATGAAGATTTAGAAGATCAACAAAAGGAACAAATTACTGAAAATTCTACTTTAAATAAAAGAAAAAAACGTAGACGCGATGCAACAAAAAGAGATTATAGTGATGATATGTTAGCATCTGCAATCAATGATTTAAAATCAGGTCAAACATTGATAGAAGCTTCTACTAAGCATAATATACCACGTTCAACATTATACATGCGTGCTAAAGCATTAGGTATACATTTAAATGCATCAAGAAATGAATATCCAGCAGAATGTATGAAAGCTGCTATAAATGCAGTAATTGGTGGCTCAAGTTTACAGCATGCATCAGAAATGTTTAGTATACCAAAAACTGTGTTATGGAGAAGAATTCAGAAAGAAGGCTATCAAATATTACGATCTGAAATGAAAAGGTCTTATGGTTCTGACAAACGAGAAGCAGCAGTTAAAGCTTTAGAAAGGGGAGAAAACCTAACAAAAGTCGCACTTGAATTCAAAATTCCAAAGACAACCTTGTTTAGGGACAAAGCTCGACTGGTGGATGAAGGGAAATTGCCATTATCCTTTTGGAAGAAACGTAAAACAGAAAATGAGGAATTAAAAAAATCTCGTTTAGAAGAAGCTGTCGCTGCCTGTAAAGGAGGAAAAATGTCACAAGCCGCGGCATCAATGACTTACCATATTCCGAAAACAACGATATGGAGGCGTCTTCAACAAGATGGTAAAAAGTCGGAGCGACTACTAAATTCAAGGAAACAAAGAATAACAGACCCTAAACATAATTCAGAAACCAAGGTACAGGAAGGTTCTGATTTTACATATTGTGAGGTTTCATCAGAAATTCCTATAACTTATATCGATGAAAATAGTATACCCGAGGATTCTGTGATAATATTAACAGCCGAAGATATGGATGGACTGAATTTAGAAGAGGGACGACAAATTATTGTTAATTCTGAATCGGTGCAAGAGTATGTTCCCTGTGCTATAAGTATTGAAGAGAATTCAAATTATTCGCAGACGGAAAGTTAG
Protein Sequence: MSEVINQHEINQSYWFKWNDYQNHLSDVVRQLLDEDCMVDVTLAAAGERIHAHRIVLCACSTLFRDILSQVNEDHPTIILSDISAQDIKSIVEFTYHGEVRVPVDNISSLLDAARSLKICGLIEIDGLDESDSVISSKDFNDNNEEPTTIISEETEENVISALQHSYEDLEDQQKEQITENSTLNKRKKRRRDATKRDYSDDMLASAINDLKSGQTLIEASTKHNIPRSTLYMRAKALGIHLNASRNEYPAECMKAAINAVIGGSSLQHASEMFSIPKTVLWRRIQKEGYQILRSEMKRSYGSDKREAAVKALERGENLTKVALEFKIPKTTLFRDKARLVDEGKLPLSFWKKRKTENEELKKSRLEEAVAACKGGKMSQAAASMTYHIPKTTIWRRLQQDGKKSERLLNSRKQRITDPKHNSETKVQEGSDFTYCEVSSEIPITYIDENSIPEDSVIILTAEDMDGLNLEEGRQIIVNSESVQEYVPCAISIEENSNYSQTES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00118108;
90% Identity: iTF_00963105;
80% Identity: iTF_00964579; iTF_00963944; iTF_00961930; iTF_00961741; iTF_00962612; iTF_00962422; iTF_00963774;