Mlag009509.1
Basic Information
- Insect
- Megachile lagopoda
- Gene Symbol
- lola
- Assembly
- GCA_036983795.1
- Location
- CM072791.1:2585263-2587476[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.24 5e+02 1.1 0.3 30 40 181 191 181 197 0.76 2 5 3.8e-07 0.00079 19.7 0.0 2 38 201 237 200 243 0.84 3 5 5.2e-11 1.1e-07 32.0 0.0 5 39 254 287 251 294 0.85 4 5 0.12 2.6e+02 2.0 0.0 21 34 321 334 307 339 0.80 5 5 1.3e-11 2.6e-08 34.0 0.1 4 39 365 400 362 405 0.93
Sequence Information
- Coding Sequence
- ATGTCTGAGGTTATTAACCAACATGAGATTAATCAGAGCTACTGGTTTAAATGGAATGATTATCAAAATCATTTATCCGATGTAGTTAGACAACTTTTGGATGAAGATTGCATGGTGGATGTTACCTTAGCAGCTGCGGGAGAACGAATTCATGCTCATCGAATAGTCCTCTGTGCTTGTAGCACGTTATTTCGaGATATATTAAGTCAAGTAAATGAAGATCATCCGACAATAATATTGAGCGATATATCTGCTCAAGATATAAAATCTATAGTAGAATTTACTTATCACGGAGAAGTAAGGGTTCCAGTTGATAATATCAGCAGTTTGTTGGATGCTGCacgttctttaaaaatatgtggTCTTATCGAGATTGATGGACTTGATGAAAGTGATTCAGTTATAAGCTCAAAAGATTTCAATGATAATAATGAAGAACCAACAACCATAATTAGCGAAGAGACagaagaaaatgttattaGTGCATTACAACATAGTTATGAAGATTTAGAAGATCAACAAAAGGaacaaattactgaaaattctactttaaataaaagaaaaaaacgtaGACGCGATGCAACAAAAAGAGATTATAGTGATGATATGTTAGCATCTGCAATCAACGATTTAAAATCAGGTCAAACATTGATAGAAGCTTCTACTAAGCATAATATACCACGTTCAACATTATACATGCGTGCTAAAGCATTAGGTATACATTTAAATGCATCAAGAAATGAATATCCAGCAGAATGTATGAAAGCTGCTATAAATGCAGTAATTGGTGGCTCAAGTTTACAGCATGCATCAGAAATGTTTAGTATACCAAAAACTGTGCTATGGAGAAGAATTCAGAAAGAAGGCTATCAAATATTACGATCTGAAATGAAAAGGTCTTATGGTTCTGACAAACGAGAAGCAGCAGTTAAAGCTTTAGAAAGGGGAGAAAACCTAACAAAAGTTGCACTTGAATTCAAaATTCCAAAGACAACCTTGTTTAGGGACAAAGCTCGACTGGTGGATGAAGGGAAATTGCCATTATCCTTTTGGAAGAAACGTAAAACAGAAAAtgaggaattaaaaaaatctcgTTTAGAAGAAGCTGTCGCTGCCTGTAAAGGAGGAAAAATGTCACAAGCCGCGGCATCAATGACTTACCATATTCCTAAAACAACGATATGGAGGCGTCTTCAACAAGATGGTAAAAAGTCGGAGCGACTACTAAATTCAAGGAAACAAAGAATAACAGACCCTAAACATAATTCAGAAACCAAGGTACAGGAAGGTTCTGATTTTACATATTGTGAGGTTTCATCAGAAATTCCTATAACTTATATCGATGAAAATAGTATACCCGAGGATTCTGTGATAATATTAACAGCAGAAGATATGGATGGACTGAATTTAGAAGAGGGACgacaaattattgttaattctGAATCGGTGCAAGAGTATGTTCCCTGTGCTATAAGTATTGAAgagaattcaaattattcgcAGACGGAAAGTTAG
- Protein Sequence
- MSEVINQHEINQSYWFKWNDYQNHLSDVVRQLLDEDCMVDVTLAAAGERIHAHRIVLCACSTLFRDILSQVNEDHPTIILSDISAQDIKSIVEFTYHGEVRVPVDNISSLLDAARSLKICGLIEIDGLDESDSVISSKDFNDNNEEPTTIISEETEENVISALQHSYEDLEDQQKEQITENSTLNKRKKRRRDATKRDYSDDMLASAINDLKSGQTLIEASTKHNIPRSTLYMRAKALGIHLNASRNEYPAECMKAAINAVIGGSSLQHASEMFSIPKTVLWRRIQKEGYQILRSEMKRSYGSDKREAAVKALERGENLTKVALEFKIPKTTLFRDKARLVDEGKLPLSFWKKRKTENEELKKSRLEEAVAACKGGKMSQAAASMTYHIPKTTIWRRLQQDGKKSERLLNSRKQRITDPKHNSETKVQEGSDFTYCEVSSEIPITYIDENSIPEDSVIILTAEDMDGLNLEEGRQIIVNSESVQEYVPCAISIEENSNYSQTES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00118108;
- 90% Identity
- iTF_00963105;
- 80% Identity
- iTF_00964385;