Basic Information

Insect: Mechanitis messenoides
Gene Symbol: L
Assembly: GCA_959347415.1
Location: OY365766.1:4257562-4273094[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.4e-06 0.00013 22.9 1.7 1 23 89 111 89 111 0.99

2 18 1.4 1.3e+02 4.0 4.8 1 23 117 139 117 139 0.97

3 18 7.9e-06 0.00073 20.5 4.1 1 23 145 167 145 167 0.99

4 18 2.4e-05 0.0023 18.9 0.1 1 23 173 195 173 195 0.98

5 18 0.002 0.19 12.9 0.1 2 23 211 233 210 233 0.94

6 18 0.91 84 4.6 0.2 9 23 264 279 260 279 0.96

7 18 0.28 26 6.2 0.0 3 23 335 355 334 355 0.97

8 18 2 1.8e+02 3.5 0.0 3 23 370 390 369 390 0.87

9 18 0.0002 0.019 16.1 1.0 1 23 398 421 398 421 0.91

10 18 0.0072 0.67 11.2 0.1 1 23 426 449 426 449 0.93

11 18 0.00083 0.077 14.1 0.1 1 23 509 533 509 533 0.98

12 18 0.00019 0.017 16.2 0.1 2 23 591 612 590 612 0.96

13 18 0.054 5 8.4 0.0 1 23 620 642 620 642 0.97

14 18 4.6 4.2e+02 2.4 0.7 2 23 650 671 649 672 0.91

15 18 9 8.3e+02 1.4 0.0 3 23 679 699 678 699 0.93

16 18 0.43 40 5.6 0.6 1 23 746 768 746 768 0.94

17 18 0.005 0.47 11.7 0.1 1 20 776 795 776 798 0.95

18 18 0.095 8.8 7.6 0.3 1 23 805 827 805 827 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.4e-06	0.00013	22.9	1.7	1	23	89	111	89	111	0.99
2	18	1.4	1.3e+02	4.0	4.8	1	23	117	139	117	139	0.97
3	18	7.9e-06	0.00073	20.5	4.1	1	23	145	167	145	167	0.99
4	18	2.4e-05	0.0023	18.9	0.1	1	23	173	195	173	195	0.98
5	18	0.002	0.19	12.9	0.1	2	23	211	233	210	233	0.94
6	18	0.91	84	4.6	0.2	9	23	264	279	260	279	0.96
7	18	0.28	26	6.2	0.0	3	23	335	355	334	355	0.97
8	18	2	1.8e+02	3.5	0.0	3	23	370	390	369	390	0.87
9	18	0.0002	0.019	16.1	1.0	1	23	398	421	398	421	0.91
10	18	0.0072	0.67	11.2	0.1	1	23	426	449	426	449	0.93
11	18	0.00083	0.077	14.1	0.1	1	23	509	533	509	533	0.98
12	18	0.00019	0.017	16.2	0.1	2	23	591	612	590	612	0.96
13	18	0.054	5	8.4	0.0	1	23	620	642	620	642	0.97
14	18	4.6	4.2e+02	2.4	0.7	2	23	650	671	649	672	0.91
15	18	9	8.3e+02	1.4	0.0	3	23	679	699	678	699	0.93
16	18	0.43	40	5.6	0.6	1	23	746	768	746	768	0.94
17	18	0.005	0.47	11.7	0.1	1	20	776	795	776	798	0.95
18	18	0.095	8.8	7.6	0.3	1	23	805	827	805	827	0.94

Sequence Information

Coding Sequence: ATGATCATGCTATTCAAAGGCAACAGCAGCAGACTGGAACACCTCATAGAGAAGATTCAggcaaataaagaaaatcacGAAGGCATATCCGAAGATATTAAACAGGCCCTGGGTAGCGTGGGAAGTACGGCGGGCAGCTCTTGGCCATCATCGACGCCGGAGCCGTCCCCGTCTCCAGCCTCCACGCCCACCTCAGCGGATGCGGTGGACGCTGACGCCGAAACCGAGCCGCCCTTCACACTCGGCGCTACCGAGCACACGCCTTATCAATGCCAGTTTTGCGACAAAGCATTCCCCAGGCTTTCATATCTAAAAAAGCATGAACAGaccCATTCAGATCAAATGCCCTTCCGATGTGAGTTCTGCGCGCGCTTGTTCAAACACAAGCGGTCCCGTGACCGCCACGTCAAGCTGCATACTGGCGATAGAAAGTACCGATGTGCTCACTGTGAATCTGCTTTTTCCAGAAGtgatcATTTGAAAATCCATATGAAGACGCATGACAACCAGAAACCGTTTCAATGCACAGTTTGCAATCGGGGATATAACACAGCTGCAGCTCTTACATCTCATATGCAAGGTCACAAACGGGACCGGGAAGGAAGGGATAATGATCGTAGAAGAACATTGCGTTGCCTGCGCTGTGGAGATGCATTTAGAAGGGCTGATATGTTACAGgcTCATATGGTAAGTGCGCATGGAGTTGATGTAGCATCCATGACTCCACCGCGGCGTGTGGCTTCTCAACCTCCACCAACTTTACTTGCTTGCATTTATTGCACTCGTGACACATTCACGAGTATGGAACAGTTACAACTACATGTACGAACAGCTCATTCTGCTTTACTAAATGGAGAATCACCAGTTCAGTATTCAGAAGATCAGCCTGGCCCAACAGATCTAAGTAGACGAGGTTCAGAAGATGTTTCTCCAATAAAACGTCCAAGACTAAGTTCTGGTTCTACTACACCAAAAACTGCATTATCGCCAAGTACGTTATTATGTAATCAATGTGATGCGGCCTTGCCAGATTTTGAAGCATTTCGAGCACATTTAAAAGGACATCTCGAAGAAGGTGGAGAATTAGGACGAAGCAGTCCCAGTCCATGTATTCATTGTGGAGCAAGCTTTGCTGACGCCGCTGCTTCCGAACGACACCTCGCTGCACATTATTTAGCTGTATCATGTGAATATACATGTCATAGCTGTGCGCGCAGTTTTCCAACTCCTGAAGAATTACAAAAGCACCTCTTCGATTTACATACACATCACCTGTACAGATGTACTTTTTGTAAAGAAGTATTCGATTCCAAAGTTGCTATTCAGGCTCATTTCGCTGTAGCGCACAGCGGAGAAAATAAAGTATGGGTATGTCGTTCATGCGGTACTGCGGGTGGTCCTTTACGTTCCGAGGCTGAGGGAGCAGCGCACGTCCGCGCACGACATGCGGCGGCGCGCTGCGCGTGCGGCGCTGTACTGTCAGGTGCACGAGCGCTCCGGGCCCACGCAGCTGCACACCACGCATACCGCTGCCCTGTTGCCACTTGTACCGATTCCTTCGCTGTTCAGTATCTACTTGAACGACACATGCAAGTGCATCAAGCGGTCGCTCATCAgaGTGTCAATGGTGAAAGACCTAAACGGACAGAAAACAACAATGCCGTTGACGGTGATGATCCATGTTCTCCATGTATTTCCGGTGCCGATAATAATGGTCCAATTGCTATTGGGGGCGAAGAACGACGACGTAAAAATGGTGCTGTAGCCTTACAATGTGCATATTGTGGGGAAAGAACTCGCAGCAGAGCGGAGTTAGAAGCTCACACTCGAGCGCATTCGGGAACAGGCGCTGCACGTCACAAGTGCCTCATTTGTGACGAAGTTCTACCCTCAGCCGCGGTGCTGGCTGAACATAAACTAACACACTGCaagGTTGTTGCTGGAGACACATGTGCACGATGTCGCTCACGACTACCCTCTGAGGATGCCTTTTTAAGTCATATGGCACGTCATCATCCAGCTTTACCAGCACCTTGCGTCATTTGCCGTCAAACTTTGGCTTCAGAGGCTGAAGCTCGTTTACACGCACGCTTTCATCTCAGACCTTCAGAAGATGAACAAAGATGTGCAATTTGTCTTAGAGCATTATCAGAAAATGAAACTGGTGAAGGTGCTAGAGCATGTTCTGCCTGCTACGCGAGACACGCCGCTCCTAGACCACAAATTACTACGGATCATGATTGTAGATTATGTCGCCGAACTCTGGGTTCACCAACTCGTCTACAGGCCCATCTGATTGAACATACATTTGCCGGCATAGGCGCATTTACATGTTATCTATGCTCCGCGATGTTTACGAGTGCAGCAGGACTACAACGACATTTGCCAGAACATGCTGCTGCACCAAGACCCTACGATTGTGGACGATGTGGCTTGAAGTTTTTCTTTAGAGCCGAACTCGATAACCATGCTTTTGTACATCTTGAAGAGGCAGAAATTGCACAAAGAGCTTTTTACGAGGCTTATGCTCGTGGTGCTGCAACCGCTTGGGCTGCTTTACAACCCACTGAATTGCAACCGCAATCAACGGCTTCAACTCCTGCACCTCCACTAAATGACGTATCTGTTAAGCGAGAACCAGAAATTAAAGAGGAACGTAACGATGAATACATTGAAGTGTCATCGCCCCCACCACATAAAACTGAGCCACCATCATCTCCTCTGCCAACagtaaaacaagaaaaaaatgatGAAGACTGA
Protein Sequence: MIMLFKGNSSRLEHLIEKIQANKENHEGISEDIKQALGSVGSTAGSSWPSSTPEPSPSPASTPTSADAVDADAETEPPFTLGATEHTPYQCQFCDKAFPRLSYLKKHEQTHSDQMPFRCEFCARLFKHKRSRDRHVKLHTGDRKYRCAHCESAFSRSDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTSHMQGHKRDREGRDNDRRRTLRCLRCGDAFRRADMLQAHMVSAHGVDVASMTPPRRVASQPPPTLLACIYCTRDTFTSMEQLQLHVRTAHSALLNGESPVQYSEDQPGPTDLSRRGSEDVSPIKRPRLSSGSTTPKTALSPSTLLCNQCDAALPDFEAFRAHLKGHLEEGGELGRSSPSPCIHCGASFADAAASERHLAAHYLAVSCEYTCHSCARSFPTPEELQKHLFDLHTHHLYRCTFCKEVFDSKVAIQAHFAVAHSGENKVWVCRSCGTAGGPLRSEAEGAAHVRARHAAARCACGAVLSGARALRAHAAAHHAYRCPVATCTDSFAVQYLLERHMQVHQAVAHQSVNGERPKRTENNNAVDGDDPCSPCISGADNNGPIAIGGEERRRKNGAVALQCAYCGERTRSRAELEAHTRAHSGTGAARHKCLICDEVLPSAAVLAEHKLTHCKVVAGDTCARCRSRLPSEDAFLSHMARHHPALPAPCVICRQTLASEAEARLHARFHLRPSEDEQRCAICLRALSENETGEGARACSACYARHAAPRPQITTDHDCRLCRRTLGSPTRLQAHLIEHTFAGIGAFTCYLCSAMFTSAAGLQRHLPEHAAAPRPYDCGRCGLKFFFRAELDNHAFVHLEEAEIAQRAFYEAYARGAATAWAALQPTELQPQSTASTPAPPLNDVSVKREPEIKEERNDEYIEVSSPPPHKTEPPSSPLPTVKQEKNDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00842895;
90% Identity: iTF_01034855; iTF_01033944; iTF_00959580; iTF_00461765; iTF_00421545; iTF_00419188; iTF_00419931; iTF_00842895;
80% Identity: -